EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000004309 (Gene tree)
Gene ID: 111562661
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 8077 bases
Position: chrNXFZ01006169.1:895897-903973
Accession: 111562661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000001335	RRM_1	PF00076.22	1.2e-31	1	2
ENSAOCP00000001335	RRM_1	PF00076.22	1.2e-31	2	2
ENSAOCP00000001335	RRM_3	PF08777.11	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000013396	-	951	XM_023261318	ENSAOCP00000001335	316 (aa)	XP_023117086	-

Gene Model

Click here to download ENSAOCG00000004309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000004309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000004309	-	52	38.947	ENSAOCG00000000337	-	68	44.118
ENSAOCG00000004309	-	52	42.604	ENSAOCG00000010671	-	69	44.379
ENSAOCG00000004309	-	52	42.442	ENSAOCG00000002992	srsf9	74	42.246
ENSAOCG00000004309	-	52	75.000	ENSAOCG00000005997	srsf4	92	76.829
ENSAOCG00000004309	-	55	62.778	ENSAOCG00000005719	srsf5b	62	64.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000004309	-	57	83.152	ENSG00000124193	SRSF6	65	82.955	Homo_sapiens
ENSAOCG00000004309	-	57	69.189	ENSAMEG00000003710	SRSF6	53	70.652	Ailuropoda_melanoleuca
ENSAOCG00000004309	-	99	62.500	ENSACIG00000023658	-	55	86.517	Amphilophus_citrinellus
ENSAOCG00000004309	-	100	86.769	ENSACIG00000020091	-	95	91.339	Amphilophus_citrinellus
ENSAOCG00000004309	-	100	81.931	ENSAPEG00000020746	-	100	82.555	Amphiprion_percula
ENSAOCG00000004309	-	57	87.568	ENSAPEG00000013086	-	53	87.568	Amphiprion_percula
ENSAOCG00000004309	-	56	96.629	ENSATEG00000007255	-	71	91.257	Anabas_testudineus
ENSAOCG00000004309	-	57	85.635	ENSACAG00000002061	SRSF6	52	85.635	Anolis_carolinensis
ENSAOCG00000004309	-	57	83.152	ENSANAG00000024080	SRSF6	65	82.955	Aotus_nancymaae
ENSAOCG00000004309	-	57	80.645	ENSAMXG00000042692	-	96	82.222	Astyanax_mexicanus
ENSAOCG00000004309	-	56	84.946	ENSAMXG00000003101	-	91	57.895	Astyanax_mexicanus
ENSAOCG00000004309	-	57	83.696	ENSBTAG00000008527	SRSF6	65	84.091	Bos_taurus
ENSAOCG00000004309	-	57	83.152	ENSCJAG00000048403	SRSF6	97	69.776	Callithrix_jacchus
ENSAOCG00000004309	-	57	83.696	ENSCAFG00000009289	SRSF6	65	84.091	Canis_familiaris
ENSAOCG00000004309	-	57	83.696	ENSCAFG00020013559	SRSF6	65	84.091	Canis_lupus_dingo
ENSAOCG00000004309	-	57	83.152	ENSCHIG00000009148	-	53	85.246	Capra_hircus
ENSAOCG00000004309	-	57	83.696	ENSCHIG00000015890	-	65	84.091	Capra_hircus
ENSAOCG00000004309	-	57	77.717	ENSCPOG00000011761	SRSF6	65	82.955	Cavia_porcellus
ENSAOCG00000004309	-	57	83.152	ENSCCAG00000026018	-	65	82.955	Cebus_capucinus
ENSAOCG00000004309	-	57	74.595	ENSCCAG00000018540	-	60	74.457	Cebus_capucinus
ENSAOCG00000004309	-	57	83.152	ENSCATG00000030794	SRSF6	65	82.955	Cercocebus_atys
ENSAOCG00000004309	-	57	83.152	ENSCLAG00000010247	SRSF6	65	82.955	Chinchilla_lanigera
ENSAOCG00000004309	-	57	83.152	ENSCSAG00000014022	SRSF6	53	85.246	Chlorocebus_sabaeus
ENSAOCG00000004309	-	57	82.888	ENSCPBG00000018200	SRSF6	54	84.409	Chrysemys_picta_bellii
ENSAOCG00000004309	-	57	82.065	ENSCANG00000037774	-	53	84.153	Colobus_angolensis_palliatus
ENSAOCG00000004309	-	57	83.152	ENSCGRG00001022339	Srsf6	65	82.955	Cricetulus_griseus_chok1gshd
ENSAOCG00000004309	-	57	82.353	ENSDARG00000016783	srsf6b	94	83.146	Danio_rerio
ENSAOCG00000004309	-	57	83.152	ENSDNOG00000008410	SRSF6	53	85.246	Dasypus_novemcinctus
ENSAOCG00000004309	-	57	83.152	ENSDORG00000028378	Srsf6	65	82.955	Dipodomys_ordii
ENSAOCG00000004309	-	57	79.781	ENSETEG00000006221	SRSF6	53	81.421	Echinops_telfairi
ENSAOCG00000004309	-	57	83.696	ENSEASG00005023429	SRSF6	53	85.792	Equus_asinus_asinus
ENSAOCG00000004309	-	57	83.696	ENSECAG00000023932	SRSF6	56	85.792	Equus_caballus
ENSAOCG00000004309	-	91	70.990	ENSELUG00000013506	SRSF6	78	87.356	Esox_lucius
ENSAOCG00000004309	-	57	87.634	ENSELUG00000024182	SRSF6	97	82.828	Esox_lucius
ENSAOCG00000004309	-	57	83.696	ENSFCAG00000032814	SRSF6	53	85.792	Felis_catus
ENSAOCG00000004309	-	98	66.879	ENSFHEG00000023065	srsf6a	54	85.714	Fundulus_heteroclitus
ENSAOCG00000004309	-	55	73.143	ENSGMOG00000006105	srsf6a	62	73.143	Gadus_morhua
ENSAOCG00000004309	-	56	82.796	ENSGMOG00000014458	srsf6a	76	71.326	Gadus_morhua
ENSAOCG00000004309	-	57	82.888	ENSGALG00000000990	SRSF6	77	72.325	Gallus_gallus
ENSAOCG00000004309	-	97	58.974	ENSGACG00000006084	srsf6a	51	77.228	Gasterosteus_aculeatus
ENSAOCG00000004309	-	57	82.888	ENSGAGG00000003238	SRSF6	54	84.409	Gopherus_agassizii
ENSAOCG00000004309	-	57	83.152	ENSGGOG00000009808	SRSF6	65	82.955	Gorilla_gorilla
ENSAOCG00000004309	-	100	87.188	ENSHBUG00000006386	-	100	86.250	Haplochromis_burtoni
ENSAOCG00000004309	-	59	67.016	ENSHGLG00000007701	-	57	66.298	Heterocephalus_glaber_female
ENSAOCG00000004309	-	57	83.152	ENSHGLG00000007348	SRSF6	65	82.955	Heterocephalus_glaber_female
ENSAOCG00000004309	-	57	83.240	ENSHCOG00000002740	srsf6a	57	84.358	Hippocampus_comes
ENSAOCG00000004309	-	57	87.151	ENSIPUG00000004776	-	63	86.486	Ictalurus_punctatus
ENSAOCG00000004309	-	57	83.152	ENSSTOG00000010866	SRSF6	65	82.955	Ictidomys_tridecemlineatus
ENSAOCG00000004309	-	88	65.248	ENSKMAG00000011934	srsf6a	59	84.916	Kryptolebias_marmoratus
ENSAOCG00000004309	-	56	85.870	ENSLBEG00000007356	srsf6a	51	85.870	Labrus_bergylta
ENSAOCG00000004309	-	97	71.383	ENSLACG00000005466	SRSF6	54	85.792	Latimeria_chalumnae
ENSAOCG00000004309	-	57	83.152	ENSMFAG00000036925	SRSF6	65	82.955	Macaca_fascicularis
ENSAOCG00000004309	-	57	83.152	ENSMMUG00000006742	SRSF6	65	82.955	Macaca_mulatta
ENSAOCG00000004309	-	57	82.609	ENSMNEG00000038270	-	53	84.699	Macaca_nemestrina
ENSAOCG00000004309	-	57	82.609	ENSMNEG00000027392	-	65	81.818	Macaca_nemestrina
ENSAOCG00000004309	-	56	83.146	ENSMZEG00005020658	-	60	83.146	Maylandia_zebra
ENSAOCG00000004309	-	100	86.154	ENSMZEG00005008032	-	100	86.751	Maylandia_zebra
ENSAOCG00000004309	-	57	82.609	ENSMICG00000008537	SRSF6	65	82.955	Microcebus_murinus
ENSAOCG00000004309	-	57	81.622	ENSMODG00000003107	SRSF6	54	84.239	Monodelphis_domestica
ENSAOCG00000004309	-	63	67.556	ENSMALG00000003702	srsf6a	55	68.444	Monopterus_albus
ENSAOCG00000004309	-	57	83.152	MGP_CAROLIEiJ_G0024606	Srsf6	65	82.955	Mus_caroli
ENSAOCG00000004309	-	57	83.152	ENSMUSG00000016921	Srsf6	65	82.955	Mus_musculus
ENSAOCG00000004309	-	57	83.152	MGP_PahariEiJ_G0026050	Srsf6	65	82.955	Mus_pahari
ENSAOCG00000004309	-	57	83.152	MGP_SPRETEiJ_G0025528	Srsf6	65	82.955	Mus_spretus
ENSAOCG00000004309	-	57	83.696	ENSMPUG00000017692	SRSF6	64	85.792	Mustela_putorius_furo
ENSAOCG00000004309	-	57	58.937	ENSMLUG00000016618	SRSF6	53	58.537	Myotis_lucifugus
ENSAOCG00000004309	-	60	68.831	ENSNGAG00000017560	Srsf6	65	82.955	Nannospalax_galili
ENSAOCG00000004309	-	100	87.188	ENSNBRG00000014709	-	100	86.250	Neolamprologus_brichardi
ENSAOCG00000004309	-	56	86.885	ENSNBRG00000001846	-	87	71.111	Neolamprologus_brichardi
ENSAOCG00000004309	-	57	83.152	ENSNLEG00000006524	SRSF6	65	82.955	Nomascus_leucogenys
ENSAOCG00000004309	-	57	81.622	ENSMEUG00000014615	SRSF6	61	84.239	Notamacropus_eugenii
ENSAOCG00000004309	-	72	82.422	ENSONIG00000020247	-	100	78.674	Oreochromis_niloticus
ENSAOCG00000004309	-	56	86.885	ENSONIG00000001925	-	52	86.486	Oreochromis_niloticus
ENSAOCG00000004309	-	57	67.016	ENSOCUG00000009785	-	63	67.368	Oryctolagus_cuniculus
ENSAOCG00000004309	-	55	53.714	ENSOCUG00000023999	-	70	55.367	Oryctolagus_cuniculus
ENSAOCG00000004309	-	57	82.609	ENSOGAG00000014468	SRSF6	53	84.699	Otolemur_garnettii
ENSAOCG00000004309	-	57	81.967	ENSOARG00000003117	SRSF6	53	82.418	Ovis_aries
ENSAOCG00000004309	-	57	71.111	ENSPPAG00000043131	-	57	72.678	Pan_paniscus
ENSAOCG00000004309	-	57	82.609	ENSPPAG00000034327	-	53	84.699	Pan_paniscus
ENSAOCG00000004309	-	57	83.696	ENSPPRG00000008917	SRSF6	53	85.792	Panthera_pardus
ENSAOCG00000004309	-	57	83.152	ENSPTRG00000044686	-	65	82.955	Pan_troglodytes
ENSAOCG00000004309	-	57	71.111	ENSPTRG00000046274	-	57	72.678	Pan_troglodytes
ENSAOCG00000004309	-	57	83.152	ENSPANG00000035224	SRSF6	65	82.955	Papio_anubis
ENSAOCG00000004309	-	97	67.456	ENSPKIG00000018463	-	86	82.609	Paramormyrops_kingsleyae
ENSAOCG00000004309	-	55	73.596	ENSPKIG00000015703	-	95	61.644	Paramormyrops_kingsleyae
ENSAOCG00000004309	-	97	70.227	ENSPMGG00000014963	srsf6a	55	87.027	Periophthalmus_magnuspinnatus
ENSAOCG00000004309	-	57	81.622	ENSPCIG00000003820	SRSF6	65	82.955	Phascolarctos_cinereus
ENSAOCG00000004309	-	57	87.931	ENSPFOG00000006437	srsf6a	69	65.779	Poecilia_formosa
ENSAOCG00000004309	-	57	82.796	ENSPLAG00000009243	srsf6a	80	83.465	Poecilia_latipinna
ENSAOCG00000004309	-	57	84.239	ENSPMEG00000006042	SRSF6	53	86.486	Poecilia_mexicana
ENSAOCG00000004309	-	57	83.152	ENSPPYG00000011019	SRSF6	53	85.246	Pongo_abelii
ENSAOCG00000004309	-	57	83.696	ENSPCAG00000010954	SRSF6	55	85.792	Procavia_capensis
ENSAOCG00000004309	-	57	82.609	ENSPCOG00000026364	SRSF6	65	82.955	Propithecus_coquereli
ENSAOCG00000004309	-	57	83.152	ENSPVAG00000015232	SRSF6	53	85.714	Pteropus_vampyrus
ENSAOCG00000004309	-	56	86.885	ENSPNYG00000011272	-	86	69.716	Pundamilia_nyererei
ENSAOCG00000004309	-	100	86.875	ENSPNYG00000004944	-	100	85.938	Pundamilia_nyererei
ENSAOCG00000004309	-	57	83.152	ENSRNOG00000006380	Srsf6	54	85.246	Rattus_norvegicus
ENSAOCG00000004309	-	57	84.444	ENSRBIG00000041414	SRSF6	62	87.500	Rhinopithecus_bieti
ENSAOCG00000004309	-	57	83.152	ENSRROG00000029989	SRSF6	65	82.955	Rhinopithecus_roxellana
ENSAOCG00000004309	-	57	83.152	ENSSBOG00000033708	-	65	82.955	Saimiri_boliviensis_boliviensis
ENSAOCG00000004309	-	56	70.950	ENSSBOG00000034078	-	54	70.950	Saimiri_boliviensis_boliviensis
ENSAOCG00000004309	-	57	81.622	ENSSHAG00000012805	SRSF6	54	84.239	Sarcophilus_harrisii
ENSAOCG00000004309	-	56	86.667	ENSSFOG00015015169	SRSF6	59	86.813	Scleropages_formosus
ENSAOCG00000004309	-	96	78.931	ENSSMAG00000017447	-	92	77.888	Scophthalmus_maximus
ENSAOCG00000004309	-	57	87.027	ENSSDUG00000016097	srsf6a	79	70.036	Seriola_dumerili
ENSAOCG00000004309	-	57	87.027	ENSSLDG00000022841	srsf6a	80	70.397	Seriola_lalandi_dorsalis
ENSAOCG00000004309	-	57	86.740	ENSSPUG00000004967	SRSF6	65	82.955	Sphenodon_punctatus
ENSAOCG00000004309	-	83	70.111	ENSSPAG00000002362	srsf6a	66	84.574	Stegastes_partitus
ENSAOCG00000004309	-	57	83.696	ENSSSCG00000007362	SRSF6	61	85.792	Sus_scrofa
ENSAOCG00000004309	-	57	83.152	ENSTGUG00000003455	SRSF6	53	85.326	Taeniopygia_guttata
ENSAOCG00000004309	-	97	71.154	ENSTNIG00000001692	srsf6a	56	85.946	Tetraodon_nigroviridis
ENSAOCG00000004309	-	57	83.696	ENSUAMG00000003559	SRSF6	65	84.091	Ursus_americanus
ENSAOCG00000004309	-	57	85.083	ENSXMAG00000021849	srsf6a	55	85.083	Xiphophorus_maculatus