EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000004500 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 3439 bases
Position: chrNXFZ01006369.1:13498-16936
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000020422	RVT_1	PF00078.27	6.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000013128	-	1077	-	ENSAOCP00000020422	358 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000004500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000004500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000004500	-	56	40.566	ENSAOCG00000018248	-	83	40.566

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000004500	-	62	36.752	ENSACIG00000022447	-	84	36.752	Amphilophus_citrinellus
ENSAOCG00000004500	-	51	36.082	ENSACIG00000023684	-	88	36.082	Amphilophus_citrinellus
ENSAOCG00000004500	-	51	37.129	ENSACAG00000010816	-	57	37.129	Anolis_carolinensis
ENSAOCG00000004500	-	74	40.714	ENSACLG00000010837	-	67	40.714	Astatotilapia_calliptera
ENSAOCG00000004500	-	50	42.188	ENSACLG00000012369	-	56	45.783	Astatotilapia_calliptera
ENSAOCG00000004500	-	61	40.693	ENSAMXG00000040763	-	59	40.693	Astyanax_mexicanus
ENSAOCG00000004500	-	70	40.637	ENSCVAG00000000484	-	89	40.637	Cyprinodon_variegatus
ENSAOCG00000004500	-	50	35.754	ENSHBUG00000023598	-	62	37.500	Haplochromis_burtoni
ENSAOCG00000004500	-	74	39.350	ENSLACG00000022376	-	59	39.350	Latimeria_chalumnae
ENSAOCG00000004500	-	70	42.045	ENSLACG00000022331	-	80	42.045	Latimeria_chalumnae
ENSAOCG00000004500	-	74	40.714	ENSMZEG00005006211	-	67	40.714	Maylandia_zebra
ENSAOCG00000004500	-	68	39.453	ENSMMOG00000003125	-	85	39.300	Mola_mola
ENSAOCG00000004500	-	62	41.631	ENSMMOG00000007110	-	84	41.631	Mola_mola
ENSAOCG00000004500	-	76	42.105	ENSORLG00000030126	-	65	42.105	Oryzias_latipes
ENSAOCG00000004500	-	75	39.085	ENSORLG00000028706	-	56	39.085	Oryzias_latipes
ENSAOCG00000004500	-	67	43.028	ENSORLG00000028976	-	66	43.028	Oryzias_latipes
ENSAOCG00000004500	-	58	44.796	ENSORLG00020018629	-	53	45.320	Oryzias_latipes_hni
ENSAOCG00000004500	-	75	39.085	ENSORLG00020017925	-	50	38.542	Oryzias_latipes_hni
ENSAOCG00000004500	-	75	38.732	ENSORLG00020016429	-	55	38.194	Oryzias_latipes_hni
ENSAOCG00000004500	-	53	43.564	ENSORLG00020007779	-	53	43.564	Oryzias_latipes_hni
ENSAOCG00000004500	-	61	45.259	ENSORLG00015007703	-	59	45.259	Oryzias_latipes_hsok
ENSAOCG00000004500	-	72	42.222	ENSORLG00015007976	-	72	42.222	Oryzias_latipes_hsok
ENSAOCG00000004500	-	53	34.715	ENSOMEG00000022778	-	50	34.184	Oryzias_melastigma
ENSAOCG00000004500	-	68	35.686	ENSOMEG00000008379	-	79	37.647	Oryzias_melastigma
ENSAOCG00000004500	-	76	40.559	ENSOMEG00000022009	-	61	40.559	Oryzias_melastigma
ENSAOCG00000004500	-	70	42.586	ENSPMEG00000003715	-	89	42.586	Poecilia_mexicana
ENSAOCG00000004500	-	73	36.496	ENSPNYG00000012547	-	89	36.496	Pundamilia_nyererei
ENSAOCG00000004500	-	66	42.800	ENSPNAG00000014375	-	61	42.800	Pygocentrus_nattereri
ENSAOCG00000004500	-	60	30.837	ENSSLDG00000008400	-	80	32.308	Seriola_lalandi_dorsalis
ENSAOCG00000004500	-	59	37.826	ENSXETG00000031743	-	91	37.826	Xenopus_tropicalis