EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000004721 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 4181 bases
Position: chrNXFZ01003310.1:7699-11879
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000001668	RNA_pol_Rpb1_5	PF04998.17	5.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000012832	-	384	-	ENSAOCP00000001668	127 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000004721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000004721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000004721	-	74	93.750	ENSAOCG00000021484	-	77	93.750
ENSAOCG00000004721	-	100	96.063	ENSAOCG00000011482	-	100	96.063
ENSAOCG00000004721	-	72	93.548	ENSAOCG00000011392	-	76	93.548
ENSAOCG00000004721	-	76	96.970	ENSAOCG00000019295	-	87	96.970

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000004721	-	74	88.542	ENSG00000148606	POLR3A	59	88.542	Homo_sapiens
ENSAOCG00000004721	-	87	84.821	ENSAPOG00000017553	-	62	84.821	Acanthochromis_polyacanthus
ENSAOCG00000004721	-	74	94.792	ENSAPEG00000004262	-	55	94.792	Amphiprion_percula
ENSAOCG00000004721	-	76	93.939	ENSAPEG00000004431	-	63	93.939	Amphiprion_percula
ENSAOCG00000004721	-	76	93.939	ENSAPEG00000019224	-	87	93.939	Amphiprion_percula
ENSAOCG00000004721	-	75	93.814	ENSAPEG00000024794	-	74	93.814	Amphiprion_percula
ENSAOCG00000004721	-	74	94.792	ENSAPEG00000020449	-	77	94.792	Amphiprion_percula
ENSAOCG00000004721	-	76	93.939	ENSAPEG00000021935	-	63	93.939	Amphiprion_percula
ENSAOCG00000004721	-	76	93.939	ENSAPEG00000001594	-	63	93.939	Amphiprion_percula
ENSAOCG00000004721	-	76	94.949	ENSAPEG00000004479	-	87	94.949	Amphiprion_percula
ENSAOCG00000004721	-	76	93.939	ENSAPEG00000004452	-	63	93.939	Amphiprion_percula
ENSAOCG00000004721	-	76	88.776	ENSAPEG00000011670	-	71	88.776	Amphiprion_percula
ENSAOCG00000004721	-	74	88.542	ENSANAG00000028922	POLR3A	59	88.542	Aotus_nancymaae
ENSAOCG00000004721	-	74	88.542	ENSCJAG00000001015	POLR3A	59	88.542	Callithrix_jacchus
ENSAOCG00000004721	-	74	88.542	ENSCCAG00000032995	POLR3A	59	88.542	Cebus_capucinus
ENSAOCG00000004721	-	74	88.542	ENSCATG00000035842	POLR3A	59	88.542	Cercocebus_atys
ENSAOCG00000004721	-	74	88.542	ENSCANG00000041071	POLR3A	59	88.542	Colobus_angolensis_palliatus
ENSAOCG00000004721	-	73	74.737	ENSCGRG00001005169	-	69	74.737	Cricetulus_griseus_chok1gshd
ENSAOCG00000004721	-	74	88.542	ENSGGOG00000027729	POLR3A	59	88.542	Gorilla_gorilla
ENSAOCG00000004721	-	74	89.583	ENSIPUG00000001736	-	60	89.583	Ictalurus_punctatus
ENSAOCG00000004721	-	74	88.542	ENSJJAG00000006291	-	55	88.542	Jaculus_jaculus
ENSAOCG00000004721	-	74	88.542	ENSMFAG00000032218	POLR3A	59	88.542	Macaca_fascicularis
ENSAOCG00000004721	-	74	88.542	ENSMMUG00000005514	POLR3A	59	88.542	Macaca_mulatta
ENSAOCG00000004721	-	74	88.542	ENSMLEG00000030014	POLR3A	59	88.542	Mandrillus_leucophaeus
ENSAOCG00000004721	-	83	80.734	ENSMICG00000005937	POLR3A	63	80.734	Microcebus_murinus
ENSAOCG00000004721	-	74	88.542	ENSPPAG00000031986	-	59	88.542	Pan_paniscus
ENSAOCG00000004721	-	74	88.542	ENSPTRG00000002664	POLR3A	59	88.542	Pan_troglodytes
ENSAOCG00000004721	-	74	88.542	ENSPANG00000022508	POLR3A	59	88.542	Papio_anubis
ENSAOCG00000004721	-	87	80.357	ENSPMGG00000015856	-	64	80.357	Periophthalmus_magnuspinnatus
ENSAOCG00000004721	-	83	80.734	ENSPCOG00000028311	POLR3A	58	80.734	Propithecus_coquereli
ENSAOCG00000004721	-	74	88.542	ENSRBIG00000034967	POLR3A	59	88.542	Rhinopithecus_bieti
ENSAOCG00000004721	-	74	88.542	ENSRROG00000025527	POLR3A	59	88.542	Rhinopithecus_roxellana
ENSAOCG00000004721	-	74	88.542	ENSSBOG00000022199	POLR3A	57	88.542	Saimiri_boliviensis_boliviensis