EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000005054 (Gene tree)
Gene ID: 111574809
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 12794 bases
Position: chrNXFZ01003009.1:477004-489797
Accession: 111574809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000001955	RRM_5	PF13893.6	1.7e-12	1	2
ENSAOCP00000001955	RRM_5	PF13893.6	1.7e-12	2	2
ENSAOCP00000001948	RRM_5	PF13893.6	1.7e-12	1	2
ENSAOCP00000001948	RRM_5	PF13893.6	1.7e-12	2	2
ENSAOCP00000001956	RRM_5	PF13893.6	2.1e-12	1	2
ENSAOCP00000001956	RRM_5	PF13893.6	2.1e-12	2	2
ENSAOCP00000001964	RRM_5	PF13893.6	2.7e-12	1	2
ENSAOCP00000001964	RRM_5	PF13893.6	2.7e-12	2	2
ENSAOCP00000001955	RRM_1	PF00076.22	1.4e-64	1	3
ENSAOCP00000001955	RRM_1	PF00076.22	1.4e-64	2	3
ENSAOCP00000001955	RRM_1	PF00076.22	1.4e-64	3	3
ENSAOCP00000001948	RRM_1	PF00076.22	1.4e-64	1	3
ENSAOCP00000001948	RRM_1	PF00076.22	1.4e-64	2	3
ENSAOCP00000001948	RRM_1	PF00076.22	1.4e-64	3	3
ENSAOCP00000001956	RRM_1	PF00076.22	1.6e-64	1	3
ENSAOCP00000001956	RRM_1	PF00076.22	1.6e-64	2	3
ENSAOCP00000001956	RRM_1	PF00076.22	1.6e-64	3	3
ENSAOCP00000001964	RRM_1	PF00076.22	2e-64	1	3
ENSAOCP00000001964	RRM_1	PF00076.22	2e-64	2	3
ENSAOCP00000001964	RRM_1	PF00076.22	2e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000012316	-	1577	XM_023279587	ENSAOCP00000001956	358 (aa)	XP_023135355	UPI000298C365
ENSAOCT00000012338	-	1041	-	ENSAOCP00000001948	346 (aa)	-	-
ENSAOCT00000012306	-	1631	XM_023279584	ENSAOCP00000001964	376 (aa)	XP_023135352	UPI0003BCAD5C
ENSAOCT00000012323	-	1538	XM_023279591	ENSAOCP00000001955	345 (aa)	XP_023135359	UPI00022B1E16

Gene Model

Click here to download ENSAOCG00000005054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000005054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000005054	elavl3	82	33.333	ENSAOCG00000006167	-	63	30.275
ENSAOCG00000005054	elavl3	83	42.105	ENSAOCG00000001252	celf1	73	42.553
ENSAOCG00000005054	elavl3	92	36.145	ENSAOCG00000021529	pabpc4	61	36.145
ENSAOCG00000005054	elavl3	51	32.787	ENSAOCG00000010066	rbms1a	54	32.338
ENSAOCG00000005054	elavl3	85	41.860	ENSAOCG00000020590	celf4	58	41.860
ENSAOCG00000005054	elavl3	63	41.818	ENSAOCG00000014482	-	50	36.364
ENSAOCG00000005054	elavl3	89	40.698	ENSAOCG00000000908	si:dkey-205h23.2	93	31.481
ENSAOCG00000005054	elavl3	90	38.462	ENSAOCG00000011133	-	70	38.462
ENSAOCG00000005054	elavl3	90	72.843	ENSAOCG00000020018	elavl1a	95	69.677
ENSAOCG00000005054	elavl3	96	64.458	ENSAOCG00000023751	-	92	67.524
ENSAOCG00000005054	elavl3	90	37.349	ENSAOCG00000011656	pabpc1a	59	37.349
ENSAOCG00000005054	elavl3	91	34.146	ENSAOCG00000007824	celf3b	98	33.735
ENSAOCG00000005054	elavl3	63	38.356	ENSAOCG00000016212	cirbpa	69	38.889
ENSAOCG00000005054	elavl3	99	82.143	ENSAOCG00000019468	ELAVL2	94	82.143
ENSAOCG00000005054	elavl3	88	35.632	ENSAOCG00000020552	celf3a	98	35.632
ENSAOCG00000005054	elavl3	76	43.023	ENSAOCG00000022110	-	62	35.606
ENSAOCG00000005054	elavl3	93	40.541	ENSAOCG00000007223	-	73	40.541
ENSAOCG00000005054	elavl3	90	37.179	ENSAOCG00000018765	tia1l	88	37.179
ENSAOCG00000005054	elavl3	88	37.179	ENSAOCG00000004685	tial1	68	37.179
ENSAOCG00000005054	elavl3	66	87.574	ENSAOCG00000022907	elavl4	88	87.574
ENSAOCG00000005054	elavl3	92	37.349	ENSAOCG00000019839	pabpc1b	59	37.349
ENSAOCG00000005054	elavl3	68	72.581	ENSAOCG00000022503	elavl4	73	70.992
ENSAOCG00000005054	elavl3	68	36.667	ENSAOCG00000008301	rbms2a	56	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000005054	elavl3	100	88.889	ENSG00000196361	ELAVL3	100	90.000	Homo_sapiens
ENSAOCG00000005054	elavl3	99	100.000	ENSAPOG00000017565	elavl3	99	100.000	Acanthochromis_polyacanthus
ENSAOCG00000005054	elavl3	99	86.517	ENSAMEG00000010487	ELAVL3	99	87.640	Ailuropoda_melanoleuca
ENSAOCG00000005054	elavl3	99	100.000	ENSACIG00000024190	elavl3	99	100.000	Amphilophus_citrinellus
ENSAOCG00000005054	elavl3	100	100.000	ENSAPEG00000011145	elavl3	100	100.000	Amphiprion_percula
ENSAOCG00000005054	elavl3	98	100.000	ENSATEG00000020941	elavl3	99	100.000	Anabas_testudineus
ENSAOCG00000005054	elavl3	98	92.222	ENSACAG00000016958	ELAVL3	93	92.222	Anolis_carolinensis
ENSAOCG00000005054	elavl3	100	89.136	ENSANAG00000030798	ELAVL3	100	90.251	Aotus_nancymaae
ENSAOCG00000005054	elavl3	100	99.711	ENSACLG00000018260	elavl3	100	99.711	Astatotilapia_calliptera
ENSAOCG00000005054	elavl3	100	98.261	ENSAMXG00000040498	elavl3	100	98.261	Astyanax_mexicanus
ENSAOCG00000005054	elavl3	100	89.167	ENSBTAG00000014412	ELAVL3	100	90.278	Bos_taurus
ENSAOCG00000005054	elavl3	100	87.193	ENSCJAG00000005589	ELAVL3	100	88.283	Callithrix_jacchus
ENSAOCG00000005054	elavl3	100	87.193	ENSCAFG00000017350	ELAVL3	100	88.283	Canis_familiaris
ENSAOCG00000005054	elavl3	99	89.213	ENSCAFG00020004614	ELAVL3	98	89.944	Canis_lupus_dingo
ENSAOCG00000005054	elavl3	99	87.603	ENSCHIG00000003436	ELAVL3	99	88.705	Capra_hircus
ENSAOCG00000005054	elavl3	99	87.328	ENSTSYG00000036621	ELAVL3	99	88.430	Carlito_syrichta
ENSAOCG00000005054	elavl3	90	74.383	ENSCAPG00000017620	ELAVL3	99	75.617	Cavia_aperea
ENSAOCG00000005054	elavl3	90	74.383	ENSCPOG00000001793	ELAVL3	99	75.617	Cavia_porcellus
ENSAOCG00000005054	elavl3	100	87.193	ENSCCAG00000034350	ELAVL3	100	88.283	Cebus_capucinus
ENSAOCG00000005054	elavl3	100	87.193	ENSCATG00000044086	ELAVL3	100	88.283	Cercocebus_atys
ENSAOCG00000005054	elavl3	100	86.921	ENSCLAG00000016404	ELAVL3	100	88.011	Chinchilla_lanigera
ENSAOCG00000005054	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSAOCG00000005054	elavl3	100	92.222	ENSCPBG00000023982	ELAVL3	100	92.222	Chrysemys_picta_bellii
ENSAOCG00000005054	elavl3	100	87.193	ENSCANG00000038728	ELAVL3	100	88.283	Colobus_angolensis_palliatus
ENSAOCG00000005054	elavl3	100	86.649	ENSCGRG00001018927	Elavl3	100	87.738	Cricetulus_griseus_chok1gshd
ENSAOCG00000005054	elavl3	99	86.777	ENSCGRG00000007158	Elavl3	99	87.879	Cricetulus_griseus_crigri
ENSAOCG00000005054	elavl3	100	98.551	ENSCSEG00000021095	elavl3	100	98.551	Cynoglossus_semilaevis
ENSAOCG00000005054	elavl3	100	100.000	ENSCVAG00000014060	elavl3	100	100.000	Cyprinodon_variegatus
ENSAOCG00000005054	elavl3	100	99.721	ENSDARG00000014420	elavl3	100	99.721	Danio_rerio
ENSAOCG00000005054	elavl3	99	86.226	ENSDORG00000002538	Elavl3	99	87.328	Dipodomys_ordii
ENSAOCG00000005054	elavl3	50	97.059	ENSETEG00000000164	-	57	97.059	Echinops_telfairi
ENSAOCG00000005054	elavl3	100	87.193	ENSEASG00005004561	ELAVL3	100	88.283	Equus_asinus_asinus
ENSAOCG00000005054	elavl3	99	89.045	ENSECAG00000020594	ELAVL3	100	91.150	Equus_caballus
ENSAOCG00000005054	elavl3	100	96.601	ENSELUG00000023043	elavl3	100	96.601	Esox_lucius
ENSAOCG00000005054	elavl3	100	87.193	ENSFCAG00000024763	ELAVL3	100	88.283	Felis_catus
ENSAOCG00000005054	elavl3	100	86.416	ENSFDAG00000008449	ELAVL3	100	86.416	Fukomys_damarensis
ENSAOCG00000005054	elavl3	100	99.710	ENSFHEG00000001675	elavl3	100	99.710	Fundulus_heteroclitus
ENSAOCG00000005054	elavl3	100	99.721	ENSGMOG00000003760	elavl3	100	99.721	Gadus_morhua
ENSAOCG00000005054	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSAOCG00000005054	elavl3	50	62.810	ENSGALG00000054488	-	77	65.574	Gallus_gallus
ENSAOCG00000005054	elavl3	99	100.000	ENSGAFG00000016015	elavl3	98	100.000	Gambusia_affinis
ENSAOCG00000005054	elavl3	100	99.441	ENSGACG00000013839	elavl3	100	99.441	Gasterosteus_aculeatus
ENSAOCG00000005054	elavl3	84	91.803	ENSGAGG00000016141	ELAVL3	100	91.803	Gopherus_agassizii
ENSAOCG00000005054	elavl3	99	87.328	ENSGGOG00000008635	ELAVL3	99	88.430	Gorilla_gorilla
ENSAOCG00000005054	elavl3	100	99.711	ENSHBUG00000020978	elavl3	100	99.711	Haplochromis_burtoni
ENSAOCG00000005054	elavl3	84	69.000	ENSHGLG00000019379	-	97	69.000	Heterocephalus_glaber_female
ENSAOCG00000005054	elavl3	100	87.193	ENSHGLG00000015199	ELAVL3	100	88.283	Heterocephalus_glaber_female
ENSAOCG00000005054	elavl3	95	85.673	ENSHGLG00100011200	ELAVL3	100	86.819	Heterocephalus_glaber_male
ENSAOCG00000005054	elavl3	99	99.718	ENSHCOG00000015894	elavl3	100	97.808	Hippocampus_comes
ENSAOCG00000005054	elavl3	99	99.123	ENSIPUG00000013002	elavl3	98	99.123	Ictalurus_punctatus
ENSAOCG00000005054	elavl3	100	87.193	ENSSTOG00000021111	ELAVL3	100	88.283	Ictidomys_tridecemlineatus
ENSAOCG00000005054	elavl3	99	88.154	ENSJJAG00000023513	Elavl3	99	88.154	Jaculus_jaculus
ENSAOCG00000005054	elavl3	99	100.000	ENSKMAG00000017412	elavl3	99	100.000	Kryptolebias_marmoratus
ENSAOCG00000005054	elavl3	100	99.469	ENSLBEG00000008073	elavl3	100	99.469	Labrus_bergylta
ENSAOCG00000005054	elavl3	100	96.438	ENSLOCG00000007647	elavl3	100	96.438	Lepisosteus_oculatus
ENSAOCG00000005054	elavl3	99	87.088	ENSLAFG00000005013	ELAVL3	99	88.187	Loxodonta_africana
ENSAOCG00000005054	elavl3	100	87.193	ENSMFAG00000003692	ELAVL3	100	88.283	Macaca_fascicularis
ENSAOCG00000005054	elavl3	100	87.193	ENSMMUG00000020616	ELAVL3	100	88.283	Macaca_mulatta
ENSAOCG00000005054	elavl3	100	86.921	ENSMNEG00000043973	ELAVL3	100	88.011	Macaca_nemestrina
ENSAOCG00000005054	elavl3	97	83.607	ENSMLEG00000013976	ELAVL3	100	82.857	Mandrillus_leucophaeus
ENSAOCG00000005054	elavl3	99	99.415	ENSMAMG00000011697	elavl3	99	99.415	Mastacembelus_armatus
ENSAOCG00000005054	elavl3	100	100.000	ENSMZEG00005019053	elavl3	100	100.000	Maylandia_zebra
ENSAOCG00000005054	elavl3	99	86.777	ENSMAUG00000016478	Elavl3	99	87.879	Mesocricetus_auratus
ENSAOCG00000005054	elavl3	99	87.328	ENSMICG00000016528	ELAVL3	99	88.430	Microcebus_murinus
ENSAOCG00000005054	elavl3	100	86.649	ENSMOCG00000002046	Elavl3	100	87.738	Microtus_ochrogaster
ENSAOCG00000005054	elavl3	99	100.000	ENSMMOG00000012154	elavl3	99	100.000	Mola_mola
ENSAOCG00000005054	elavl3	99	90.730	ENSMODG00000006653	ELAVL3	92	90.730	Monodelphis_domestica
ENSAOCG00000005054	elavl3	99	100.000	ENSMALG00000016659	elavl3	99	100.000	Monopterus_albus
ENSAOCG00000005054	elavl3	98	89.205	MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	Mus_caroli
ENSAOCG00000005054	elavl3	100	86.649	ENSMUSG00000003410	Elavl3	100	89.200	Mus_musculus
ENSAOCG00000005054	elavl3	98	88.920	MGP_PahariEiJ_G0014760	Elavl3	100	90.057	Mus_pahari
ENSAOCG00000005054	elavl3	52	82.609	MGP_SPRETEiJ_G0033017	-	51	82.609	Mus_spretus
ENSAOCG00000005054	elavl3	100	86.921	ENSMPUG00000005040	ELAVL3	100	88.011	Mustela_putorius_furo
ENSAOCG00000005054	elavl3	99	88.462	ENSMLUG00000016320	ELAVL3	99	88.462	Myotis_lucifugus
ENSAOCG00000005054	elavl3	100	87.193	ENSNGAG00000000968	Elavl3	100	88.283	Nannospalax_galili
ENSAOCG00000005054	elavl3	99	100.000	ENSNBRG00000010319	elavl3	99	100.000	Neolamprologus_brichardi
ENSAOCG00000005054	elavl3	99	91.185	ENSMEUG00000016706	ELAVL3	99	91.185	Notamacropus_eugenii
ENSAOCG00000005054	elavl3	85	89.431	ENSOPRG00000007373	ELAVL3	99	89.431	Ochotona_princeps
ENSAOCG00000005054	elavl3	100	87.193	ENSODEG00000015790	ELAVL3	100	88.283	Octodon_degus
ENSAOCG00000005054	elavl3	99	100.000	ENSONIG00000001538	elavl3	98	100.000	Oreochromis_niloticus
ENSAOCG00000005054	elavl3	88	91.270	ENSOANG00000015046	ELAVL3	98	91.270	Ornithorhynchus_anatinus
ENSAOCG00000005054	elavl3	100	99.721	ENSORLG00000005379	elavl3	100	99.721	Oryzias_latipes
ENSAOCG00000005054	elavl3	100	100.000	ENSORLG00020004570	elavl3	100	100.000	Oryzias_latipes_hni
ENSAOCG00000005054	elavl3	100	98.883	ENSORLG00015000662	elavl3	100	98.883	Oryzias_latipes_hsok
ENSAOCG00000005054	elavl3	100	99.710	ENSOMEG00000023959	elavl3	100	99.710	Oryzias_melastigma
ENSAOCG00000005054	elavl3	100	87.193	ENSOGAG00000007072	ELAVL3	100	88.283	Otolemur_garnettii
ENSAOCG00000005054	elavl3	100	87.466	ENSOARG00000018464	ELAVL3	100	88.556	Ovis_aries
ENSAOCG00000005054	elavl3	100	87.193	ENSPPAG00000033972	ELAVL3	100	88.283	Pan_paniscus
ENSAOCG00000005054	elavl3	100	87.193	ENSPPRG00000005151	ELAVL3	100	88.283	Panthera_pardus
ENSAOCG00000005054	elavl3	97	84.615	ENSPTIG00000013610	ELAVL3	97	85.799	Panthera_tigris_altaica
ENSAOCG00000005054	elavl3	100	87.193	ENSPTRG00000010506	ELAVL3	100	88.283	Pan_troglodytes
ENSAOCG00000005054	elavl3	100	87.193	ENSPANG00000005849	ELAVL3	100	88.283	Papio_anubis
ENSAOCG00000005054	elavl3	100	99.162	ENSPKIG00000016207	elavl3	100	99.162	Paramormyrops_kingsleyae
ENSAOCG00000005054	elavl3	100	100.000	ENSPMGG00000002016	elavl3	100	100.000	Periophthalmus_magnuspinnatus
ENSAOCG00000005054	elavl3	98	99.187	ENSPFOG00000007754	elavl3	100	99.187	Poecilia_formosa
ENSAOCG00000005054	elavl3	100	98.841	ENSPLAG00000001547	elavl3	99	100.000	Poecilia_latipinna
ENSAOCG00000005054	elavl3	98	100.000	ENSPMEG00000010156	elavl3	99	100.000	Poecilia_mexicana
ENSAOCG00000005054	elavl3	100	100.000	ENSPREG00000006971	elavl3	100	100.000	Poecilia_reticulata
ENSAOCG00000005054	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSAOCG00000005054	elavl3	83	88.182	ENSPCAG00000015952	ELAVL3	60	90.909	Procavia_capensis
ENSAOCG00000005054	elavl3	100	87.193	ENSPCOG00000023781	ELAVL3	100	88.283	Propithecus_coquereli
ENSAOCG00000005054	elavl3	100	87.193	ENSPVAG00000014893	ELAVL3	100	88.283	Pteropus_vampyrus
ENSAOCG00000005054	elavl3	100	99.711	ENSPNYG00000013186	elavl3	98	99.711	Pundamilia_nyererei
ENSAOCG00000005054	elavl3	100	99.133	ENSPNAG00000003633	elavl3	100	99.133	Pygocentrus_nattereri
ENSAOCG00000005054	elavl3	100	86.649	ENSRNOG00000013752	Elavl3	100	87.738	Rattus_norvegicus
ENSAOCG00000005054	elavl3	100	87.193	ENSRBIG00000034762	ELAVL3	100	88.283	Rhinopithecus_bieti
ENSAOCG00000005054	elavl3	90	86.400	ENSRROG00000034305	ELAVL3	99	90.435	Rhinopithecus_roxellana
ENSAOCG00000005054	elavl3	99	87.328	ENSSBOG00000030047	ELAVL3	100	89.423	Saimiri_boliviensis_boliviensis
ENSAOCG00000005054	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSAOCG00000005054	elavl3	94	99.112	ENSSFOG00015023630	elavl3	100	99.112	Scleropages_formosus
ENSAOCG00000005054	elavl3	99	99.123	ENSSMAG00000004671	elavl3	99	99.123	Scophthalmus_maximus
ENSAOCG00000005054	elavl3	99	100.000	ENSSDUG00000020708	elavl3	99	100.000	Seriola_dumerili
ENSAOCG00000005054	elavl3	99	100.000	ENSSLDG00000013769	elavl3	99	100.000	Seriola_lalandi_dorsalis
ENSAOCG00000005054	elavl3	99	77.473	ENSSARG00000005949	ELAVL3	99	78.571	Sorex_araneus
ENSAOCG00000005054	elavl3	99	100.000	ENSSPAG00000000990	elavl3	100	99.419	Stegastes_partitus
ENSAOCG00000005054	elavl3	100	87.193	ENSSSCG00000013617	ELAVL3	100	88.283	Sus_scrofa
ENSAOCG00000005054	elavl3	98	100.000	ENSTRUG00000010719	elavl3	99	100.000	Takifugu_rubripes
ENSAOCG00000005054	elavl3	99	99.162	ENSTNIG00000018572	elavl3	99	99.162	Tetraodon_nigroviridis
ENSAOCG00000005054	elavl3	97	81.902	ENSTBEG00000006133	ELAVL3	100	82.875	Tupaia_belangeri
ENSAOCG00000005054	elavl3	100	86.921	ENSTTRG00000001789	ELAVL3	100	88.011	Tursiops_truncatus
ENSAOCG00000005054	elavl3	97	90.149	ENSUAMG00000000405	ELAVL3	96	91.343	Ursus_americanus
ENSAOCG00000005054	elavl3	98	82.392	ENSUMAG00000019546	ELAVL3	88	83.721	Ursus_maritimus
ENSAOCG00000005054	elavl3	100	88.889	ENSVVUG00000023733	ELAVL3	100	90.000	Vulpes_vulpes
ENSAOCG00000005054	elavl3	99	92.174	ENSXETG00000016741	elavl3	99	92.174	Xenopus_tropicalis
ENSAOCG00000005054	elavl3	100	99.710	ENSXMAG00000018287	elavl3	100	99.710	Xiphophorus_maculatus