EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000005395 (Gene tree)
Gene ID
111582554
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Minus strand
Length
8743 bases
Position
chrNXFZ01003910.1:27187-35929
Accession
111582554
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000002265RRM_1PF00076.221.3e-4412
ENSAOCP00000002265RRM_1PF00076.221.3e-4422
ENSAOCP00000020952RRM_1PF00076.221.4e-4412
ENSAOCP00000020952RRM_1PF00076.221.4e-4422
ENSAOCP00000020953RRM_1PF00076.221.5e-4412
ENSAOCP00000020953RRM_1PF00076.221.5e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000011779-2296XM_023291285ENSAOCP00000002265509 (aa)XP_023147053UPI000B902B19
ENSAOCT00000011766-2347XM_023291281ENSAOCP00000020953526 (aa)XP_023147049UPI000B8F8932
ENSAOCT00000011792-2319XM_023291283ENSAOCP00000020952513 (aa)XP_023147051-
Gene Model
Click here to download ENSAOCG00000005395's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000005395's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000005395puf60b5338.235ENSAOCG00000003595-6238.235
ENSAOCG00000005395puf60b10083.852ENSAOCG00000015558-10083.681
ENSAOCG00000005395puf60b5635.294ENSAOCG00000015571u2af2a6337.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000005395puf60b10086.180ENSG00000179950PUF6010086.180Homo_sapiens
ENSAOCG00000005395puf60b100100.000ENSAPOG00000001713puf60b100100.000Acanthochromis_polyacanthus
ENSAOCG00000005395puf60b10084.261ENSAMEG00000006406PUF609383.302Ailuropoda_melanoleuca
ENSAOCG00000005395puf60b10097.856ENSACIG00000021705puf60b10097.856Amphilophus_citrinellus
ENSAOCG00000005395puf60b10078.016ENSACIG00000003263-9978.252Amphilophus_citrinellus
ENSAOCG00000005395puf60b10074.806ENSAPEG00000001836-9977.909Amphiprion_percula
ENSAOCG00000005395puf60b10096.464ENSAPEG00000011923puf60b10096.464Amphiprion_percula
ENSAOCG00000005395puf60b10099.025ENSATEG00000001730puf60b10098.289Anabas_testudineus
ENSAOCG00000005395puf60b10082.879ENSATEG00000006303-10082.765Anabas_testudineus
ENSAOCG00000005395puf60b10086.756ENSAPLG00000010150PUF6010085.958Anas_platyrhynchos
ENSAOCG00000005395puf60b10085.687ENSACAG00000001645PUF609685.687Anolis_carolinensis
ENSAOCG00000005395puf60b10085.988ENSANAG00000018626PUF6010085.988Aotus_nancymaae
ENSAOCG00000005395puf60b10097.856ENSACLG00000004462puf60b10097.856Astatotilapia_calliptera
ENSAOCG00000005395puf60b10086.667ENSAMXG00000036570puf60a9888.142Astyanax_mexicanus
ENSAOCG00000005395puf60b10080.835ENSAMXG00000041030puf60b10081.404Astyanax_mexicanus
ENSAOCG00000005395puf60b10086.180ENSBTAG00000037493PUF609985.389Bos_taurus
ENSAOCG00000005395puf60b7853.357WBGene00004389rnp-68354.355Caenorhabditis_elegans
ENSAOCG00000005395puf60b10086.180ENSCJAG00000021485PUF609885.389Callithrix_jacchus
ENSAOCG00000005395puf60b10085.988ENSCAFG00000001400PUF609385.199Canis_familiaris
ENSAOCG00000005395puf60b10086.372ENSCAFG00020018754PUF609885.579Canis_lupus_dingo
ENSAOCG00000005395puf60b10086.180ENSCHIG00000001618PUF608785.389Capra_hircus
ENSAOCG00000005395puf60b10086.372ENSTSYG00000011912PUF6010086.372Carlito_syrichta
ENSAOCG00000005395puf60b10081.714ENSCPOG00000014613PUF609480.979Cavia_porcellus
ENSAOCG00000005395puf60b10086.372ENSCCAG00000007744PUF609885.579Cebus_capucinus
ENSAOCG00000005395puf60b10086.180ENSCATG00000035405PUF609885.389Cercocebus_atys
ENSAOCG00000005395puf60b10086.564ENSCLAG00000009154PUF609385.769Chinchilla_lanigera
ENSAOCG00000005395puf60b10086.180ENSCSAG00000008878PUF6010086.180Chlorocebus_sabaeus
ENSAOCG00000005395puf60b10085.988ENSCPBG00000005595PUF609984.934Chrysemys_picta_bellii
ENSAOCG00000005395puf60b6161.994ENSCING00000002156-8761.994Ciona_intestinalis
ENSAOCG00000005395puf60b9949.341ENSCING00000008436-9949.341Ciona_intestinalis
ENSAOCG00000005395puf60b9753.817ENSCSAVG00000001385-9953.817Ciona_savignyi
ENSAOCG00000005395puf60b9748.221ENSCSAVG00000004765-9750.725Ciona_savignyi
ENSAOCG00000005395puf60b8185.782ENSCANG00000041843PUF6010085.782Colobus_angolensis_palliatus
ENSAOCG00000005395puf60b10086.756ENSCGRG00001017442Puf609385.958Cricetulus_griseus_chok1gshd
ENSAOCG00000005395puf60b10086.756ENSCGRG00000003717Puf609385.958Cricetulus_griseus_crigri
ENSAOCG00000005395puf60b10098.441ENSCSEG00000019887puf60b9497.524Cynoglossus_semilaevis
ENSAOCG00000005395puf60b9978.516ENSCSEG00000014845-9178.906Cynoglossus_semilaevis
ENSAOCG00000005395puf60b10096.881ENSCVAG00000009386puf60b10096.881Cyprinodon_variegatus
ENSAOCG00000005395puf60b9182.051ENSCVAG00000001560-9881.624Cyprinodon_variegatus
ENSAOCG00000005395puf60b10081.404ENSDARG00000001241puf60b9997.619Danio_rerio
ENSAOCG00000005395puf60b10087.048ENSDARG00000032175puf60a9993.191Danio_rerio
ENSAOCG00000005395puf60b9971.318ENSDNOG00000043278PUF609171.318Dasypus_novemcinctus
ENSAOCG00000005395puf60b10086.756ENSDORG00000004585Puf609585.958Dipodomys_ordii
ENSAOCG00000005395puf60b8267.033FBgn0028577hfp9951.103Drosophila_melanogaster
ENSAOCG00000005395puf60b10059.628ENSEBUG00000014291puf60b8463.811Eptatretus_burgeri
ENSAOCG00000005395puf60b9571.283ENSEBUG00000005470-9269.186Eptatretus_burgeri
ENSAOCG00000005395puf60b10086.372ENSEASG00005009695PUF609885.579Equus_asinus_asinus
ENSAOCG00000005395puf60b10086.372ENSECAG00000024681PUF609885.444Equus_caballus
ENSAOCG00000005395puf60b10088.931ENSELUG00000006507puf60b10086.176Esox_lucius
ENSAOCG00000005395puf60b10088.781ENSELUG00000018443-10087.925Esox_lucius
ENSAOCG00000005395puf60b10086.180ENSFCAG00000001045PUF6010086.180Felis_catus
ENSAOCG00000005395puf60b10077.351ENSFALG00000001136PUF609877.040Ficedula_albicollis
ENSAOCG00000005395puf60b10086.372ENSFDAG00000017177PUF609385.579Fukomys_damarensis
ENSAOCG00000005395puf60b9682.688ENSFHEG00000021687PUF6010083.610Fundulus_heteroclitus
ENSAOCG00000005395puf60b10097.661ENSFHEG00000020046puf60b10097.661Fundulus_heteroclitus
ENSAOCG00000005395puf60b10083.591ENSGMOG00000006392puf60b10083.015Gadus_morhua
ENSAOCG00000005395puf60b6690.087ENSGALG00000039901PUF609490.087Gallus_gallus
ENSAOCG00000005395puf60b10097.466ENSGAFG00000021040puf60b10097.466Gambusia_affinis
ENSAOCG00000005395puf60b10080.971ENSGAFG00000004334-9981.314Gambusia_affinis
ENSAOCG00000005395puf60b10072.957ENSGACG00000001484-10072.179Gasterosteus_aculeatus
ENSAOCG00000005395puf60b10084.600ENSGACG00000004717puf60b9884.586Gasterosteus_aculeatus
ENSAOCG00000005395puf60b10085.988ENSGAGG00000013289PUF609384.774Gopherus_agassizii
ENSAOCG00000005395puf60b10086.180ENSGGOG00000004646PUF609885.389Gorilla_gorilla
ENSAOCG00000005395puf60b10083.658ENSHBUG00000009634-10083.903Haplochromis_burtoni
ENSAOCG00000005395puf60b10097.856ENSHBUG00000015118puf60b10097.856Haplochromis_burtoni
ENSAOCG00000005395puf60b10086.372ENSHGLG00000006111PUF609385.579Heterocephalus_glaber_female
ENSAOCG00000005395puf60b10086.372ENSHGLG00100012362PUF609385.579Heterocephalus_glaber_male
ENSAOCG00000005395puf60b9868.775ENSHCOG00000000378-9966.541Hippocampus_comes
ENSAOCG00000005395puf60b10093.985ENSHCOG00000015541puf60b10093.820Hippocampus_comes
ENSAOCG00000005395puf60b10085.605ENSIPUG00000002453puf60a9985.605Ictalurus_punctatus
ENSAOCG00000005395puf60b10082.197ENSIPUG00000004660puf60b9982.197Ictalurus_punctatus
ENSAOCG00000005395puf60b10086.564ENSSTOG00000025037PUF609485.769Ictidomys_tridecemlineatus
ENSAOCG00000005395puf60b10086.756ENSJJAG00000001076Puf609385.958Jaculus_jaculus
ENSAOCG00000005395puf60b10078.503ENSKMAG00000010106-10078.503Kryptolebias_marmoratus
ENSAOCG00000005395puf60b10097.466ENSKMAG00000016745puf60b10097.466Kryptolebias_marmoratus
ENSAOCG00000005395puf60b10094.542ENSLBEG00000012505puf60b10094.542Labrus_bergylta
ENSAOCG00000005395puf60b7180.054ENSLACG00000005456PUF6010080.217Latimeria_chalumnae
ENSAOCG00000005395puf60b10089.515ENSLOCG00000010106puf60b10088.826Lepisosteus_oculatus
ENSAOCG00000005395puf60b10085.413ENSLAFG00000022929PUF609484.820Loxodonta_africana
ENSAOCG00000005395puf60b10086.180ENSMFAG00000043373PUF609886.180Macaca_fascicularis
ENSAOCG00000005395puf60b10086.180ENSMMUG00000013558PUF609885.389Macaca_mulatta
ENSAOCG00000005395puf60b10086.180ENSMNEG00000031099PUF609885.389Macaca_nemestrina
ENSAOCG00000005395puf60b10086.180ENSMLEG00000040009PUF6010086.180Mandrillus_leucophaeus
ENSAOCG00000005395puf60b10097.466ENSMAMG00000010394puf60b10094.877Mastacembelus_armatus
ENSAOCG00000005395puf60b10084.078ENSMAMG00000019476-10083.523Mastacembelus_armatus
ENSAOCG00000005395puf60b10083.658ENSMZEG00005019425-10082.922Maylandia_zebra
ENSAOCG00000005395puf60b10097.856ENSMZEG00005018515puf60b10097.856Maylandia_zebra
ENSAOCG00000005395puf60b10086.756ENSMGAG00000013070PUF609590.407Meleagris_gallopavo
ENSAOCG00000005395puf60b9669.048ENSMAUG00000018549-9571.516Mesocricetus_auratus
ENSAOCG00000005395puf60b6990.556ENSMAUG00000014267-9089.344Mesocricetus_auratus
ENSAOCG00000005395puf60b10086.372ENSMICG00000012226PUF609985.633Microcebus_murinus
ENSAOCG00000005395puf60b10086.756ENSMOCG00000018780Puf609385.958Microtus_ochrogaster
ENSAOCG00000005395puf60b10075.538ENSMMOG00000018059-9976.606Mola_mola
ENSAOCG00000005395puf60b10098.635ENSMMOG00000004217puf60b10098.635Mola_mola
ENSAOCG00000005395puf60b10086.180ENSMODG00000009161PUF609485.389Monodelphis_domestica
ENSAOCG00000005395puf60b10091.228ENSMALG00000006797puf60b10090.684Monopterus_albus
ENSAOCG00000005395puf60b10082.879ENSMALG00000000200-10081.973Monopterus_albus
ENSAOCG00000005395puf60b10086.948MGP_CAROLIEiJ_G0019910Puf609386.148Mus_caroli
ENSAOCG00000005395puf60b10086.948ENSMUSG00000002524Puf609386.148Mus_musculus
ENSAOCG00000005395puf60b10086.948MGP_PahariEiJ_G0019920Puf609386.148Mus_pahari
ENSAOCG00000005395puf60b10086.948MGP_SPRETEiJ_G0020812Puf609386.148Mus_spretus
ENSAOCG00000005395puf60b10086.180ENSMPUG00000008137PUF609285.389Mustela_putorius_furo
ENSAOCG00000005395puf60b10085.988ENSMLUG00000000238-9385.199Myotis_lucifugus
ENSAOCG00000005395puf60b9981.765ENSMLUG00000013032-9881.765Myotis_lucifugus
ENSAOCG00000005395puf60b10086.756ENSNGAG00000000712Puf6010086.756Nannospalax_galili
ENSAOCG00000005395puf60b8394.725ENSNBRG00000013047puf60b9796.643Neolamprologus_brichardi
ENSAOCG00000005395puf60b10083.658ENSNBRG00000017223-10082.922Neolamprologus_brichardi
ENSAOCG00000005395puf60b10086.180ENSNLEG00000002156PUF609885.389Nomascus_leucogenys
ENSAOCG00000005395puf60b7294.585ENSOPRG00000002147PUF607294.585Ochotona_princeps
ENSAOCG00000005395puf60b9863.690ENSODEG00000015513-9861.612Octodon_degus
ENSAOCG00000005395puf60b7190.882ENSODEG00000014024-8990.882Octodon_degus
ENSAOCG00000005395puf60b10083.463ENSONIG00000014030-9982.543Oreochromis_niloticus
ENSAOCG00000005395puf60b10097.856ENSONIG00000006247puf60b9897.688Oreochromis_niloticus
ENSAOCG00000005395puf60b9772.400ENSOANG00000006962PUF609871.739Ornithorhynchus_anatinus
ENSAOCG00000005395puf60b9982.274ENSORLG00000028655-9982.274Oryzias_latipes
ENSAOCG00000005395puf60b10097.076ENSORLG00000012279puf60b10097.076Oryzias_latipes
ENSAOCG00000005395puf60b9982.913ENSORLG00020018144-9982.197Oryzias_latipes_hni
ENSAOCG00000005395puf60b10097.076ENSORLG00020007333puf6010097.076Oryzias_latipes_hni
ENSAOCG00000005395puf60b9982.913ENSORLG00015016833-9982.008Oryzias_latipes_hsok
ENSAOCG00000005395puf60b10096.699ENSORLG00015007718puf60b10096.699Oryzias_latipes_hsok
ENSAOCG00000005395puf60b9982.879ENSOMEG00000022185-9982.163Oryzias_melastigma
ENSAOCG00000005395puf60b10094.656ENSOMEG00000001643puf60b10094.413Oryzias_melastigma
ENSAOCG00000005395puf60b10086.564ENSOGAG00000006259PUF609385.769Otolemur_garnettii
ENSAOCG00000005395puf60b10084.363ENSOARG00000016235PUF609883.588Ovis_aries
ENSAOCG00000005395puf60b10086.180ENSPPAG00000029933PUF609984.615Pan_paniscus
ENSAOCG00000005395puf60b10086.180ENSPPRG00000003257PUF6010086.180Panthera_pardus
ENSAOCG00000005395puf60b10083.877ENSPTIG00000009795PUF609983.112Panthera_tigris_altaica
ENSAOCG00000005395puf60b10086.180ENSPTRG00000020670PUF609984.615Pan_troglodytes
ENSAOCG00000005395puf60b10086.180ENSPTRG00000043963-9885.389Pan_troglodytes
ENSAOCG00000005395puf60b10086.180ENSPANG00000021936PUF609885.389Papio_anubis
ENSAOCG00000005395puf60b10090.253ENSPKIG00000012204puf60b10091.033Paramormyrops_kingsleyae
ENSAOCG00000005395puf60b10089.749ENSPKIG00000004295puf60a9992.537Paramormyrops_kingsleyae
ENSAOCG00000005395puf60b10086.180ENSPSIG00000004679PUF609985.389Pelodiscus_sinensis
ENSAOCG00000005395puf60b10095.349ENSPMGG00000013444puf60b10094.981Periophthalmus_magnuspinnatus
ENSAOCG00000005395puf60b10086.756ENSPEMG00000008820Puf609385.958Peromyscus_maniculatus_bairdii
ENSAOCG00000005395puf60b10086.564ENSPCIG00000020270PUF609986.069Phascolarctos_cinereus
ENSAOCG00000005395puf60b10097.661ENSPFOG00000019217puf60b9997.410Poecilia_formosa
ENSAOCG00000005395puf60b10082.136ENSPFOG00000011118-10081.818Poecilia_formosa
ENSAOCG00000005395puf60b10097.661ENSPLAG00000010754puf60b10097.661Poecilia_latipinna
ENSAOCG00000005395puf60b10082.524ENSPLAG00000017025-9281.818Poecilia_latipinna
ENSAOCG00000005395puf60b10097.661ENSPMEG00000000838puf60b10097.661Poecilia_mexicana
ENSAOCG00000005395puf60b10082.330ENSPMEG00000009767-9282.008Poecilia_mexicana
ENSAOCG00000005395puf60b10095.066ENSPREG00000005440puf60b10095.565Poecilia_reticulata
ENSAOCG00000005395puf60b8184.123ENSPPYG00000018951-9584.123Pongo_abelii
ENSAOCG00000005395puf60b8185.782ENSPCAG00000014837PUF6010085.782Procavia_capensis
ENSAOCG00000005395puf60b10086.180ENSPCOG00000027981PUF609985.472Propithecus_coquereli
ENSAOCG00000005395puf60b10096.835ENSPVAG00000016167PUF608196.835Pteropus_vampyrus
ENSAOCG00000005395puf60b10083.658ENSPNYG00000004273-10082.922Pundamilia_nyererei
ENSAOCG00000005395puf60b10097.856ENSPNYG00000002556puf60b10097.856Pundamilia_nyererei
ENSAOCG00000005395puf60b9887.698ENSPNAG00000019909puf60a9988.294Pygocentrus_nattereri
ENSAOCG00000005395puf60b9981.225ENSPNAG00000019415puf60b9180.671Pygocentrus_nattereri
ENSAOCG00000005395puf60b10086.948ENSRNOG00000009960Puf609386.148Rattus_norvegicus
ENSAOCG00000005395puf60b10086.180ENSRBIG00000035274PUF609885.389Rhinopithecus_bieti
ENSAOCG00000005395puf60b10086.180ENSRROG00000029360PUF609985.389Rhinopithecus_roxellana
ENSAOCG00000005395puf60b10084.837ENSSBOG00000027089PUF609983.490Saimiri_boliviensis_boliviensis
ENSAOCG00000005395puf60b9085.928ENSSHAG00000006668PUF609085.053Sarcophilus_harrisii
ENSAOCG00000005395puf60b9590.224ENSSFOG00015019371puf60a9890.224Scleropages_formosus
ENSAOCG00000005395puf60b10082.852ENSSFOG00015019619puf60b9985.976Scleropages_formosus
ENSAOCG00000005395puf60b77100.000ENSSMAG00000016381puf60b78100.000Scophthalmus_maximus
ENSAOCG00000005395puf60b9784.337ENSSDUG00000007048-9783.757Seriola_dumerili
ENSAOCG00000005395puf60b10097.137ENSSDUG00000009935puf60b9997.331Seriola_dumerili
ENSAOCG00000005395puf60b10099.220ENSSLDG00000024011puf60b10096.584Seriola_lalandi_dorsalis
ENSAOCG00000005395puf60b10081.731ENSSLDG00000007366-9982.150Seriola_lalandi_dorsalis
ENSAOCG00000005395puf60b6578.466ENSSPUG00000013518PUF609279.091Sphenodon_punctatus
ENSAOCG00000005395puf60b10097.037ENSSPAG00000012144puf60b10097.037Stegastes_partitus
ENSAOCG00000005395puf60b10083.721ENSSPAG00000020285-10084.302Stegastes_partitus
ENSAOCG00000005395puf60b10086.180ENSSSCG00000038800PUF609884.902Sus_scrofa
ENSAOCG00000005395puf60b10083.908ENSTGUG00000012797-10083.144Taeniopygia_guttata
ENSAOCG00000005395puf60b10096.881ENSTRUG00000005420puf60b10094.307Takifugu_rubripes
ENSAOCG00000005395puf60b10078.794ENSTRUG00000008843-10081.891Takifugu_rubripes
ENSAOCG00000005395puf60b10080.702ENSTNIG00000003069-9980.507Tetraodon_nigroviridis
ENSAOCG00000005395puf60b10096.881ENSTNIG00000013675puf60b9996.881Tetraodon_nigroviridis
ENSAOCG00000005395puf60b7766.097ENSTBEG00000001899-10066.952Tupaia_belangeri
ENSAOCG00000005395puf60b5686.254ENSTBEG00000002751-9786.254Tupaia_belangeri
ENSAOCG00000005395puf60b10085.029ENSTTRG00000017088PUF6010085.221Tursiops_truncatus
ENSAOCG00000005395puf60b10086.372ENSUAMG00000024917PUF609885.579Ursus_americanus
ENSAOCG00000005395puf60b10081.382ENSUMAG00000000272PUF609380.455Ursus_maritimus
ENSAOCG00000005395puf60b10086.372ENSVVUG00000022527PUF6010086.372Vulpes_vulpes
ENSAOCG00000005395puf60b10084.261ENSXETG00000012469puf609983.629Xenopus_tropicalis
ENSAOCG00000005395puf60b9797.581ENSXCOG00000012355puf60b10097.581Xiphophorus_couchianus
ENSAOCG00000005395puf60b10097.661ENSXMAG00000001862puf60b10097.661Xiphophorus_maculatus
ENSAOCG00000005395puf60b9981.746ENSXMAG00000010507-9981.548Xiphophorus_maculatus

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