EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000005457 (Gene tree)
Gene ID: 111564345
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 11248 bases
Position: chrNXFZ01006331.1:8263-19510
Accession: 111564345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000002348	PRP4	PF08799.11	2.1e-14	1	1
ENSAOCP00000021006	PRP4	PF08799.11	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000011621	-	2084	XM_023263849	ENSAOCP00000021006	510 (aa)	XP_023119617	UPI000C2FFB3A
ENSAOCT00000011637	-	1976	-	ENSAOCP00000002348	474 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000005457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000005457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000005457	prpf4	61	32.812	ENSAOCG00000000453	tbl3	64	32.812
ENSAOCG00000005457	prpf4	54	31.696	ENSAOCG00000002553	wdr5	89	31.696
ENSAOCG00000005457	prpf4	58	31.875	ENSAOCG00000001066	POC1A	73	31.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000005457	prpf4	99	76.832	ENSG00000136875	PRPF4	96	76.832	Homo_sapiens
ENSAOCG00000005457	prpf4	99	97.930	ENSAPOG00000014132	prpf4	99	97.930	Acanthochromis_polyacanthus
ENSAOCG00000005457	prpf4	99	76.832	ENSAMEG00000013048	PRPF4	94	76.832	Ailuropoda_melanoleuca
ENSAOCG00000005457	prpf4	100	94.706	ENSACIG00000005579	prpf4	100	94.706	Amphilophus_citrinellus
ENSAOCG00000005457	prpf4	100	99.804	ENSAPEG00000000776	prpf4	100	99.804	Amphiprion_percula
ENSAOCG00000005457	prpf4	100	94.706	ENSATEG00000023013	prpf4	100	94.706	Anabas_testudineus
ENSAOCG00000005457	prpf4	99	76.575	ENSAPLG00000006534	PRPF4	94	76.575	Anas_platyrhynchos
ENSAOCG00000005457	prpf4	99	75.000	ENSACAG00000015110	PRPF4	98	75.000	Anolis_carolinensis
ENSAOCG00000005457	prpf4	99	76.832	ENSANAG00000022464	PRPF4	93	76.832	Aotus_nancymaae
ENSAOCG00000005457	prpf4	100	94.314	ENSACLG00000019031	prpf4	100	94.314	Astatotilapia_calliptera
ENSAOCG00000005457	prpf4	100	73.444	ENSAMXG00000006756	prpf4	100	73.651	Astyanax_mexicanus
ENSAOCG00000005457	prpf4	99	76.832	ENSBTAG00000004571	PRPF4	96	76.832	Bos_taurus
ENSAOCG00000005457	prpf4	92	43.552	WBGene00007972	prp-4	95	43.552	Caenorhabditis_elegans
ENSAOCG00000005457	prpf4	99	76.832	ENSCJAG00000017856	PRPF4	96	76.832	Callithrix_jacchus
ENSAOCG00000005457	prpf4	99	76.832	ENSCAFG00000003224	PRPF4	93	76.832	Canis_familiaris
ENSAOCG00000005457	prpf4	99	76.832	ENSCAFG00020022637	PRPF4	97	76.832	Canis_lupus_dingo
ENSAOCG00000005457	prpf4	99	76.832	ENSCHIG00000024648	-	96	76.832	Capra_hircus
ENSAOCG00000005457	prpf4	99	77.030	ENSTSYG00000010366	PRPF4	96	77.030	Carlito_syrichta
ENSAOCG00000005457	prpf4	90	68.974	ENSCAPG00000008935	PRPF4	97	68.974	Cavia_aperea
ENSAOCG00000005457	prpf4	99	76.436	ENSCPOG00000010747	-	96	76.436	Cavia_porcellus
ENSAOCG00000005457	prpf4	99	71.485	ENSCPOG00000014729	-	96	71.485	Cavia_porcellus
ENSAOCG00000005457	prpf4	99	76.634	ENSCCAG00000028990	PRPF4	96	76.634	Cebus_capucinus
ENSAOCG00000005457	prpf4	99	76.832	ENSCATG00000021552	PRPF4	96	76.832	Cercocebus_atys
ENSAOCG00000005457	prpf4	99	76.832	ENSCLAG00000013448	PRPF4	96	76.832	Chinchilla_lanigera
ENSAOCG00000005457	prpf4	89	75.442	ENSCHOG00000007233	PRPF4	100	75.442	Choloepus_hoffmanni
ENSAOCG00000005457	prpf4	100	75.538	ENSCPBG00000019136	PRPF4	73	75.787	Chrysemys_picta_bellii
ENSAOCG00000005457	prpf4	100	58.891	ENSCING00000001299	-	100	58.891	Ciona_intestinalis
ENSAOCG00000005457	prpf4	98	58.812	ENSCSAVG00000009178	-	99	60.823	Ciona_savignyi
ENSAOCG00000005457	prpf4	99	76.832	ENSCANG00000003246	PRPF4	96	76.832	Colobus_angolensis_palliatus
ENSAOCG00000005457	prpf4	99	77.030	ENSCGRG00001016992	Prpf4	96	77.030	Cricetulus_griseus_chok1gshd
ENSAOCG00000005457	prpf4	99	77.030	ENSCGRG00000017560	Prpf4	96	77.030	Cricetulus_griseus_crigri
ENSAOCG00000005457	prpf4	100	87.451	ENSCSEG00000020451	prpf4	100	87.451	Cynoglossus_semilaevis
ENSAOCG00000005457	prpf4	100	80.000	ENSDARG00000067639	prpf4	100	80.000	Danio_rerio
ENSAOCG00000005457	prpf4	99	76.634	ENSDNOG00000013203	PRPF4	96	76.634	Dasypus_novemcinctus
ENSAOCG00000005457	prpf4	99	77.228	ENSDORG00000026275	Prpf4	96	77.228	Dipodomys_ordii
ENSAOCG00000005457	prpf4	99	50.091	FBgn0036733	U4-U6-60K	99	49.909	Drosophila_melanogaster
ENSAOCG00000005457	prpf4	99	77.426	ENSETEG00000020389	PRPF4	96	77.426	Echinops_telfairi
ENSAOCG00000005457	prpf4	99	67.640	ENSEBUG00000015229	prpf4	88	68.315	Eptatretus_burgeri
ENSAOCG00000005457	prpf4	99	76.832	ENSEASG00005022678	PRPF4	96	76.832	Equus_asinus_asinus
ENSAOCG00000005457	prpf4	99	76.832	ENSECAG00000007072	PRPF4	96	76.832	Equus_caballus
ENSAOCG00000005457	prpf4	84	81.172	ENSEEUG00000007480	PRPF4	96	61.451	Erinaceus_europaeus
ENSAOCG00000005457	prpf4	100	80.588	ENSELUG00000007510	prpf4	100	80.588	Esox_lucius
ENSAOCG00000005457	prpf4	99	76.832	ENSFCAG00000005514	PRPF4	96	76.832	Felis_catus
ENSAOCG00000005457	prpf4	99	76.126	ENSFALG00000005423	PRPF4	85	76.126	Ficedula_albicollis
ENSAOCG00000005457	prpf4	99	76.832	ENSFDAG00000005839	PRPF4	96	76.832	Fukomys_damarensis
ENSAOCG00000005457	prpf4	100	90.784	ENSFHEG00000001300	prpf4	100	90.784	Fundulus_heteroclitus
ENSAOCG00000005457	prpf4	99	76.378	ENSGALG00000008857	PRPF4	94	76.378	Gallus_gallus
ENSAOCG00000005457	prpf4	85	90.274	ENSGAFG00000012164	prpf4	68	90.274	Gambusia_affinis
ENSAOCG00000005457	prpf4	100	81.836	ENSGACG00000015476	prpf4	100	81.641	Gasterosteus_aculeatus
ENSAOCG00000005457	prpf4	99	75.787	ENSGAGG00000025029	PRPF4	94	75.787	Gopherus_agassizii
ENSAOCG00000005457	prpf4	99	76.832	ENSGGOG00000006943	PRPF4	96	76.832	Gorilla_gorilla
ENSAOCG00000005457	prpf4	100	94.314	ENSHBUG00000000562	prpf4	100	94.314	Haplochromis_burtoni
ENSAOCG00000005457	prpf4	99	77.030	ENSHGLG00000015191	PRPF4	96	77.030	Heterocephalus_glaber_female
ENSAOCG00000005457	prpf4	95	66.053	ENSHGLG00000016628	-	95	66.462	Heterocephalus_glaber_female
ENSAOCG00000005457	prpf4	99	61.782	ENSHGLG00000003838	-	96	61.782	Heterocephalus_glaber_female
ENSAOCG00000005457	prpf4	99	61.782	ENSHGLG00100005571	-	96	61.782	Heterocephalus_glaber_male
ENSAOCG00000005457	prpf4	100	78.824	ENSIPUG00000017956	PRPF4	100	78.824	Ictalurus_punctatus
ENSAOCG00000005457	prpf4	99	76.436	ENSSTOG00000027833	PRPF4	96	76.436	Ictidomys_tridecemlineatus
ENSAOCG00000005457	prpf4	99	76.832	ENSJJAG00000008838	Prpf4	96	76.832	Jaculus_jaculus
ENSAOCG00000005457	prpf4	100	91.373	ENSKMAG00000013236	prpf4	100	91.373	Kryptolebias_marmoratus
ENSAOCG00000005457	prpf4	100	93.922	ENSLBEG00000020611	prpf4	100	93.922	Labrus_bergylta
ENSAOCG00000005457	prpf4	100	71.930	ENSLACG00000016317	PRPF4	97	71.930	Latimeria_chalumnae
ENSAOCG00000005457	prpf4	100	81.765	ENSLOCG00000000581	prpf4	100	81.996	Lepisosteus_oculatus
ENSAOCG00000005457	prpf4	99	76.832	ENSLAFG00000018225	PRPF4	96	76.832	Loxodonta_africana
ENSAOCG00000005457	prpf4	99	76.634	ENSMFAG00000039397	PRPF4	96	76.634	Macaca_fascicularis
ENSAOCG00000005457	prpf4	99	76.832	ENSMMUG00000005844	PRPF4	96	76.832	Macaca_mulatta
ENSAOCG00000005457	prpf4	99	68.317	ENSMNEG00000033737	PRPF4	96	68.317	Macaca_nemestrina
ENSAOCG00000005457	prpf4	99	76.832	ENSMLEG00000040284	PRPF4	96	76.832	Mandrillus_leucophaeus
ENSAOCG00000005457	prpf4	100	93.529	ENSMAMG00000020141	prpf4	100	93.529	Mastacembelus_armatus
ENSAOCG00000005457	prpf4	100	94.314	ENSMZEG00005023205	prpf4	100	94.314	Maylandia_zebra
ENSAOCG00000005457	prpf4	99	75.787	ENSMGAG00000001796	PRPF4	94	75.787	Meleagris_gallopavo
ENSAOCG00000005457	prpf4	99	77.030	ENSMAUG00000018022	Prpf4	96	77.030	Mesocricetus_auratus
ENSAOCG00000005457	prpf4	99	76.275	ENSMICG00000015022	PRPF4	97	76.275	Microcebus_murinus
ENSAOCG00000005457	prpf4	99	76.634	ENSMOCG00000018273	Prpf4	96	76.634	Microtus_ochrogaster
ENSAOCG00000005457	prpf4	100	90.588	ENSMMOG00000021177	prpf4	100	90.588	Mola_mola
ENSAOCG00000005457	prpf4	99	75.686	ENSMODG00000004444	-	97	75.984	Monodelphis_domestica
ENSAOCG00000005457	prpf4	99	75.490	ENSMODG00000025096	-	94	75.787	Monodelphis_domestica
ENSAOCG00000005457	prpf4	100	94.314	ENSMALG00000013624	prpf4	100	94.314	Monopterus_albus
ENSAOCG00000005457	prpf4	99	77.030	MGP_CAROLIEiJ_G0026078	Prpf4	96	77.030	Mus_caroli
ENSAOCG00000005457	prpf4	99	77.030	ENSMUSG00000066148	Prpf4	96	77.030	Mus_musculus
ENSAOCG00000005457	prpf4	99	77.228	MGP_PahariEiJ_G0028413	Prpf4	96	77.228	Mus_pahari
ENSAOCG00000005457	prpf4	99	77.030	MGP_SPRETEiJ_G0027042	Prpf4	96	77.030	Mus_spretus
ENSAOCG00000005457	prpf4	99	76.832	ENSMPUG00000007883	PRPF4	96	76.832	Mustela_putorius_furo
ENSAOCG00000005457	prpf4	99	76.634	ENSMLUG00000015309	-	93	76.634	Myotis_lucifugus
ENSAOCG00000005457	prpf4	99	75.644	ENSMLUG00000008626	-	94	75.644	Myotis_lucifugus
ENSAOCG00000005457	prpf4	99	71.683	ENSNGAG00000000468	Prpf4	96	71.683	Nannospalax_galili
ENSAOCG00000005457	prpf4	100	94.314	ENSNBRG00000007972	prpf4	100	94.314	Neolamprologus_brichardi
ENSAOCG00000005457	prpf4	99	76.832	ENSNLEG00000016647	PRPF4	96	76.832	Nomascus_leucogenys
ENSAOCG00000005457	prpf4	99	75.686	ENSMEUG00000013256	PRPF4	98	75.984	Notamacropus_eugenii
ENSAOCG00000005457	prpf4	99	77.030	ENSOPRG00000005302	PRPF4	96	77.030	Ochotona_princeps
ENSAOCG00000005457	prpf4	99	76.832	ENSODEG00000018147	PRPF4	96	76.832	Octodon_degus
ENSAOCG00000005457	prpf4	100	94.510	ENSONIG00000012671	prpf4	100	94.510	Oreochromis_niloticus
ENSAOCG00000005457	prpf4	99	77.030	ENSOCUG00000005046	PRPF4	96	77.030	Oryctolagus_cuniculus
ENSAOCG00000005457	prpf4	100	89.412	ENSORLG00000019641	prpf4	100	89.412	Oryzias_latipes
ENSAOCG00000005457	prpf4	100	89.412	ENSORLG00020019438	prpf4	100	89.412	Oryzias_latipes_hni
ENSAOCG00000005457	prpf4	100	88.431	ENSOMEG00000020941	prpf4	100	88.820	Oryzias_melastigma
ENSAOCG00000005457	prpf4	99	72.673	ENSOGAG00000007802	PRPF4	94	72.673	Otolemur_garnettii
ENSAOCG00000005457	prpf4	99	76.832	ENSOARG00000006319	PRPF4	93	76.832	Ovis_aries
ENSAOCG00000005457	prpf4	99	76.832	ENSPPAG00000041797	PRPF4	96	76.832	Pan_paniscus
ENSAOCG00000005457	prpf4	99	76.832	ENSPPRG00000014360	PRPF4	96	76.832	Panthera_pardus
ENSAOCG00000005457	prpf4	99	76.832	ENSPTIG00000009574	PRPF4	96	76.832	Panthera_tigris_altaica
ENSAOCG00000005457	prpf4	99	76.832	ENSPTRG00000021274	PRPF4	96	76.832	Pan_troglodytes
ENSAOCG00000005457	prpf4	99	77.030	ENSPANG00000025776	PRPF4	92	77.030	Papio_anubis
ENSAOCG00000005457	prpf4	100	80.980	ENSPKIG00000017259	prpf4	100	80.980	Paramormyrops_kingsleyae
ENSAOCG00000005457	prpf4	100	75.342	ENSPSIG00000010713	PRPF4	89	75.591	Pelodiscus_sinensis
ENSAOCG00000005457	prpf4	100	64.498	ENSPMGG00000000997	prpf4	98	65.799	Periophthalmus_magnuspinnatus
ENSAOCG00000005457	prpf4	99	77.030	ENSPEMG00000024115	Prpf4	96	77.030	Peromyscus_maniculatus_bairdii
ENSAOCG00000005457	prpf4	99	75.882	ENSPCIG00000003821	PRPF4	98	76.181	Phascolarctos_cinereus
ENSAOCG00000005457	prpf4	100	84.630	ENSPFOG00000013524	prpf4	99	89.362	Poecilia_formosa
ENSAOCG00000005457	prpf4	85	88.000	ENSPLAG00000011620	prpf4	96	88.199	Poecilia_latipinna
ENSAOCG00000005457	prpf4	99	89.676	ENSPMEG00000006813	prpf4	100	89.676	Poecilia_mexicana
ENSAOCG00000005457	prpf4	99	76.634	ENSPCAG00000002561	PRPF4	98	76.634	Procavia_capensis
ENSAOCG00000005457	prpf4	99	76.634	ENSPCOG00000011975	PRPF4	96	76.634	Propithecus_coquereli
ENSAOCG00000005457	prpf4	99	73.465	ENSPVAG00000004708	PRPF4	96	73.465	Pteropus_vampyrus
ENSAOCG00000005457	prpf4	100	94.510	ENSPNYG00000008013	prpf4	100	94.510	Pundamilia_nyererei
ENSAOCG00000005457	prpf4	100	80.392	ENSPNAG00000000697	prpf4	100	80.392	Pygocentrus_nattereri
ENSAOCG00000005457	prpf4	99	77.030	ENSRNOG00000014777	Prpf4	96	77.030	Rattus_norvegicus
ENSAOCG00000005457	prpf4	99	76.832	ENSRBIG00000040221	PRPF4	96	76.832	Rhinopithecus_bieti
ENSAOCG00000005457	prpf4	99	76.832	ENSRROG00000040240	PRPF4	96	76.832	Rhinopithecus_roxellana
ENSAOCG00000005457	prpf4	99	75.882	ENSSHAG00000017658	PRPF4	97	76.181	Sarcophilus_harrisii
ENSAOCG00000005457	prpf4	100	81.569	ENSSFOG00015008963	prpf4	100	81.569	Scleropages_formosus
ENSAOCG00000005457	prpf4	100	91.176	ENSSMAG00000008889	prpf4	100	91.176	Scophthalmus_maximus
ENSAOCG00000005457	prpf4	99	94.824	ENSSDUG00000022083	prpf4	94	94.824	Seriola_dumerili
ENSAOCG00000005457	prpf4	99	94.617	ENSSLDG00000008115	prpf4	94	94.617	Seriola_lalandi_dorsalis
ENSAOCG00000005457	prpf4	99	76.471	ENSSPUG00000015582	PRPF4	97	76.471	Sphenodon_punctatus
ENSAOCG00000005457	prpf4	100	89.474	ENSSPAG00000011286	prpf4	100	89.474	Stegastes_partitus
ENSAOCG00000005457	prpf4	99	76.832	ENSSSCG00000024648	PRPF4	96	76.832	Sus_scrofa
ENSAOCG00000005457	prpf4	97	77.419	ENSTGUG00000002623	PRPF4	100	77.642	Taeniopygia_guttata
ENSAOCG00000005457	prpf4	100	89.020	ENSTRUG00000008853	prpf4	100	89.020	Takifugu_rubripes
ENSAOCG00000005457	prpf4	100	89.020	ENSTNIG00000013250	prpf4	100	89.020	Tetraodon_nigroviridis
ENSAOCG00000005457	prpf4	99	69.505	ENSTBEG00000000821	PRPF4	96	69.505	Tupaia_belangeri
ENSAOCG00000005457	prpf4	89	78.859	ENSTTRG00000003246	PRPF4	85	78.859	Tursiops_truncatus
ENSAOCG00000005457	prpf4	67	73.270	ENSUAMG00000018288	PRPF4	94	67.989	Ursus_americanus
ENSAOCG00000005457	prpf4	99	76.238	ENSUMAG00000019375	PRPF4	96	76.238	Ursus_maritimus
ENSAOCG00000005457	prpf4	99	76.436	ENSVPAG00000005281	PRPF4	96	76.436	Vicugna_pacos
ENSAOCG00000005457	prpf4	99	76.031	ENSVVUG00000002476	PRPF4	99	75.835	Vulpes_vulpes
ENSAOCG00000005457	prpf4	78	73.641	ENSXCOG00000006101	prpf4	93	73.641	Xiphophorus_couchianus
ENSAOCG00000005457	prpf4	100	83.544	ENSXMAG00000002750	prpf4	100	83.544	Xiphophorus_maculatus