EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000005487 (Gene tree)
Gene ID: 111565486
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 76885 bases
Position: chrNXFZ01001923.1:1284254-1361138
Accession: 111565486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000020993	ResIII	PF04851.15	3.6e-06	1	1
ENSAOCP00000002317	ResIII	PF04851.15	3.7e-06	1	1
ENSAOCP00000002359	ResIII	PF04851.15	1.8e-05	1	1
ENSAOCP00000002386	ResIII	PF04851.15	1.8e-05	1	1
ENSAOCP00000020993	BRK	PF07533.16	2.1e-32	1	2
ENSAOCP00000020993	BRK	PF07533.16	2.1e-32	2	2
ENSAOCP00000002317	BRK	PF07533.16	2.2e-32	1	2
ENSAOCP00000002317	BRK	PF07533.16	2.2e-32	2	2
ENSAOCP00000002359	BRK	PF07533.16	3.4e-32	1	2
ENSAOCP00000002359	BRK	PF07533.16	3.4e-32	2	2
ENSAOCP00000002386	BRK	PF07533.16	3.4e-32	1	2
ENSAOCP00000002386	BRK	PF07533.16	3.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000011698	-	10360	XM_023265574	ENSAOCP00000002317	2490 (aa)	XP_023121342	-
ENSAOCT00000011580	-	12274	-	ENSAOCP00000002386	3004 (aa)	-	-
ENSAOCT00000011662	-	10384	-	ENSAOCP00000020993	2462 (aa)	-	-
ENSAOCT00000011625	-	12449	-	ENSAOCP00000002359	3004 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000005487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000005487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000005487	chd9	67	61.244	ENSAOCG00000016793	chd8	70	61.355
ENSAOCG00000005487	chd9	81	72.222	ENSAOCG00000002337	chd7	85	70.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000005487	chd9	99	69.181	ENSG00000177200	CHD9	96	70.899	Homo_sapiens
ENSAOCG00000005487	chd9	100	99.157	ENSAPOG00000023034	chd9	100	99.157	Acanthochromis_polyacanthus
ENSAOCG00000005487	chd9	67	75.640	ENSAMEG00000016232	CHD9	79	71.500	Ailuropoda_melanoleuca
ENSAOCG00000005487	chd9	98	87.587	ENSACIG00000004097	chd9	98	85.475	Amphilophus_citrinellus
ENSAOCG00000005487	chd9	100	99.799	ENSAPEG00000009859	chd9	100	99.799	Amphiprion_percula
ENSAOCG00000005487	chd9	99	93.415	ENSATEG00000002748	chd9	99	89.238	Anabas_testudineus
ENSAOCG00000005487	chd9	98	70.285	ENSAPLG00000002826	CHD9	61	77.940	Anas_platyrhynchos
ENSAOCG00000005487	chd9	68	75.717	ENSACAG00000016150	CHD9	85	69.808	Anolis_carolinensis
ENSAOCG00000005487	chd9	99	60.668	ENSANAG00000015630	CHD9	93	69.366	Aotus_nancymaae
ENSAOCG00000005487	chd9	98	89.437	ENSACLG00000016899	chd9	99	87.967	Astatotilapia_calliptera
ENSAOCG00000005487	chd9	99	77.196	ENSAMXG00000005652	chd9	99	77.694	Astyanax_mexicanus
ENSAOCG00000005487	chd9	67	74.970	ENSBTAG00000002287	CHD9	79	71.129	Bos_taurus
ENSAOCG00000005487	chd9	99	60.586	ENSCJAG00000001573	CHD9	93	69.718	Callithrix_jacchus
ENSAOCG00000005487	chd9	67	75.492	ENSCAFG00000009699	CHD9	79	71.255	Canis_familiaris
ENSAOCG00000005487	chd9	67	75.492	ENSCAFG00020002879	CHD9	91	69.718	Canis_lupus_dingo
ENSAOCG00000005487	chd9	67	75.060	ENSTSYG00000007693	CHD9	91	69.366	Carlito_syrichta
ENSAOCG00000005487	chd9	74	60.135	ENSCAPG00000011604	CHD9	57	63.953	Cavia_aperea
ENSAOCG00000005487	chd9	67	70.960	ENSCPOG00000036544	CHD9	83	67.961	Cavia_porcellus
ENSAOCG00000005487	chd9	67	75.164	ENSCCAG00000036178	CHD9	93	70.318	Cebus_capucinus
ENSAOCG00000005487	chd9	67	75.298	ENSCATG00000036753	CHD9	91	69.097	Cercocebus_atys
ENSAOCG00000005487	chd9	67	75.298	ENSCLAG00000007137	CHD9	99	78.073	Chinchilla_lanigera
ENSAOCG00000005487	chd9	67	75.239	ENSCSAG00000005311	CHD9	84	70.997	Chlorocebus_sabaeus
ENSAOCG00000005487	chd9	70	91.864	ENSCHOG00000003935	CHD9	55	91.821	Choloepus_hoffmanni
ENSAOCG00000005487	chd9	90	82.748	ENSCPBG00000012459	CHD9	84	80.084	Chrysemys_picta_bellii
ENSAOCG00000005487	chd9	67	75.239	ENSCANG00000030349	CHD9	91	69.718	Colobus_angolensis_palliatus
ENSAOCG00000005487	chd9	99	68.427	ENSCGRG00001016150	Chd9	84	70.017	Cricetulus_griseus_chok1gshd
ENSAOCG00000005487	chd9	99	68.427	ENSCGRG00000012850	Chd9	99	77.741	Cricetulus_griseus_crigri
ENSAOCG00000005487	chd9	99	86.824	ENSCSEG00000009209	chd9	99	85.697	Cynoglossus_semilaevis
ENSAOCG00000005487	chd9	96	90.013	ENSCVAG00000016195	chd9	99	82.760	Cyprinodon_variegatus
ENSAOCG00000005487	chd9	99	77.316	ENSDARG00000074498	chd9	99	77.264	Danio_rerio
ENSAOCG00000005487	chd9	97	69.526	ENSDNOG00000006045	CHD9	96	70.987	Dasypus_novemcinctus
ENSAOCG00000005487	chd9	83	68.599	ENSDORG00000008523	-	96	70.509	Dipodomys_ordii
ENSAOCG00000005487	chd9	65	92.063	ENSETEG00000009565	CHD9	76	92.063	Echinops_telfairi
ENSAOCG00000005487	chd9	98	68.380	ENSEASG00005014832	CHD9	95	79.325	Equus_asinus_asinus
ENSAOCG00000005487	chd9	66	76.727	ENSECAG00000011505	CHD9	84	71.154	Equus_caballus
ENSAOCG00000005487	chd9	79	86.087	ENSEEUG00000014515	CHD9	68	85.083	Erinaceus_europaeus
ENSAOCG00000005487	chd9	99	78.960	ENSELUG00000006031	chd9	99	79.359	Esox_lucius
ENSAOCG00000005487	chd9	99	69.027	ENSFCAG00000022534	CHD9	91	70.070	Felis_catus
ENSAOCG00000005487	chd9	98	70.081	ENSFALG00000013276	CHD9	97	71.021	Ficedula_albicollis
ENSAOCG00000005487	chd9	67	75.179	ENSFDAG00000021037	CHD9	84	70.375	Fukomys_damarensis
ENSAOCG00000005487	chd9	99	89.224	ENSFHEG00000006068	chd9	99	89.023	Fundulus_heteroclitus
ENSAOCG00000005487	chd9	81	87.525	ENSGMOG00000006040	chd9	84	87.593	Gadus_morhua
ENSAOCG00000005487	chd9	94	71.963	ENSGALG00000039178	CHD9	80	72.402	Gallus_gallus
ENSAOCG00000005487	chd9	99	90.060	ENSGAFG00000010014	chd9	99	90.584	Gambusia_affinis
ENSAOCG00000005487	chd9	67	75.179	ENSGGOG00000014816	CHD9	93	69.366	Gorilla_gorilla
ENSAOCG00000005487	chd9	99	90.258	ENSHBUG00000023322	chd9	99	91.868	Haplochromis_burtoni
ENSAOCG00000005487	chd9	98	69.403	ENSHGLG00000014938	CHD9	96	80.975	Heterocephalus_glaber_female
ENSAOCG00000005487	chd9	96	84.619	ENSHCOG00000000937	chd9	99	83.713	Hippocampus_comes
ENSAOCG00000005487	chd9	99	78.068	ENSIPUG00000016448	chd9	97	80.986	Ictalurus_punctatus
ENSAOCG00000005487	chd9	98	68.585	ENSSTOG00000022273	CHD9	99	77.741	Ictidomys_tridecemlineatus
ENSAOCG00000005487	chd9	82	69.419	ENSJJAG00000015741	-	96	69.821	Jaculus_jaculus
ENSAOCG00000005487	chd9	97	91.829	ENSKMAG00000016784	chd9	99	91.027	Kryptolebias_marmoratus
ENSAOCG00000005487	chd9	99	90.788	ENSLBEG00000012077	chd9	99	91.590	Labrus_bergylta
ENSAOCG00000005487	chd9	96	66.832	ENSLACG00000005557	CHD9	93	62.397	Latimeria_chalumnae
ENSAOCG00000005487	chd9	99	77.192	ENSLOCG00000007225	chd9	99	76.372	Lepisosteus_oculatus
ENSAOCG00000005487	chd9	67	74.822	ENSLAFG00000015374	CHD9	79	69.925	Loxodonta_africana
ENSAOCG00000005487	chd9	95	70.130	ENSMFAG00000041354	CHD9	94	71.171	Macaca_fascicularis
ENSAOCG00000005487	chd9	67	75.298	ENSMMUG00000016310	CHD9	91	69.718	Macaca_mulatta
ENSAOCG00000005487	chd9	87	71.716	ENSMNEG00000031494	CHD9	80	72.825	Macaca_nemestrina
ENSAOCG00000005487	chd9	67	75.298	ENSMLEG00000043219	CHD9	91	69.718	Mandrillus_leucophaeus
ENSAOCG00000005487	chd9	99	92.283	ENSMAMG00000003909	chd9	99	88.722	Mastacembelus_armatus
ENSAOCG00000005487	chd9	99	92.754	ENSMZEG00005006581	chd9	99	93.495	Maylandia_zebra
ENSAOCG00000005487	chd9	98	65.198	ENSMGAG00000004642	CHD9	59	72.545	Meleagris_gallopavo
ENSAOCG00000005487	chd9	67	75.239	ENSMICG00000016679	CHD9	91	70.070	Microcebus_murinus
ENSAOCG00000005487	chd9	98	86.590	ENSMMOG00000016406	chd9	99	81.140	Mola_mola
ENSAOCG00000005487	chd9	87	73.373	ENSMODG00000013142	-	96	78.190	Monodelphis_domestica
ENSAOCG00000005487	chd9	98	89.138	ENSMALG00000013306	chd9	99	86.359	Monopterus_albus
ENSAOCG00000005487	chd9	67	74.598	MGP_CAROLIEiJ_G0031364	Chd9	84	70.598	Mus_caroli
ENSAOCG00000005487	chd9	99	68.244	ENSMUSG00000056608	Chd9	99	77.076	Mus_musculus
ENSAOCG00000005487	chd9	98	67.342	MGP_PahariEiJ_G0022964	Chd9	84	69.179	Mus_pahari
ENSAOCG00000005487	chd9	67	74.226	MGP_SPRETEiJ_G0032483	Chd9	84	70.072	Mus_spretus
ENSAOCG00000005487	chd9	67	75.671	ENSMPUG00000003285	CHD9	84	71.033	Mustela_putorius_furo
ENSAOCG00000005487	chd9	67	75.075	ENSMLUG00000004456	CHD9	79	70.071	Myotis_lucifugus
ENSAOCG00000005487	chd9	99	92.066	ENSNBRG00000009423	chd9	99	92.710	Neolamprologus_brichardi
ENSAOCG00000005487	chd9	89	62.246	ENSNLEG00000001026	CHD9	80	72.973	Nomascus_leucogenys
ENSAOCG00000005487	chd9	73	95.489	ENSMEUG00000008222	-	74	89.375	Notamacropus_eugenii
ENSAOCG00000005487	chd9	55	95.489	ENSOPRG00000011168	CHD9	70	85.754	Ochotona_princeps
ENSAOCG00000005487	chd9	99	68.874	ENSODEG00000004466	CHD9	84	71.116	Octodon_degus
ENSAOCG00000005487	chd9	98	91.931	ENSONIG00000002816	chd9	98	92.219	Oreochromis_niloticus
ENSAOCG00000005487	chd9	66	77.474	ENSOANG00000013401	CHD9	84	72.229	Ornithorhynchus_anatinus
ENSAOCG00000005487	chd9	99	68.778	ENSOCUG00000001016	CHD9	96	69.813	Oryctolagus_cuniculus
ENSAOCG00000005487	chd9	97	88.510	ENSORLG00000013810	chd9	97	86.081	Oryzias_latipes
ENSAOCG00000005487	chd9	97	83.292	ENSORLG00020020665	chd9	98	80.492	Oryzias_latipes_hni
ENSAOCG00000005487	chd9	98	88.235	ENSORLG00015019126	chd9	97	88.727	Oryzias_latipes_hsok
ENSAOCG00000005487	chd9	55	89.562	ENSOMEG00000015978	chd9	91	84.007	Oryzias_melastigma
ENSAOCG00000005487	chd9	99	68.722	ENSOGAG00000002110	CHD9	79	70.763	Otolemur_garnettii
ENSAOCG00000005487	chd9	67	74.837	ENSOARG00000017664	CHD9	79	71.039	Ovis_aries
ENSAOCG00000005487	chd9	98	68.957	ENSPPAG00000039388	-	96	70.426	Pan_paniscus
ENSAOCG00000005487	chd9	99	69.107	ENSPPRG00000004801	CHD9	91	70.775	Panthera_pardus
ENSAOCG00000005487	chd9	99	67.981	ENSPTIG00000021854	CHD9	91	61.268	Panthera_tigris_altaica
ENSAOCG00000005487	chd9	67	75.179	ENSPTRG00000008113	CHD9	93	69.366	Pan_troglodytes
ENSAOCG00000005487	chd9	99	68.750	ENSPANG00000019307	CHD9	97	69.516	Papio_anubis
ENSAOCG00000005487	chd9	97	72.206	ENSPKIG00000025401	-	90	68.285	Paramormyrops_kingsleyae
ENSAOCG00000005487	chd9	96	78.485	ENSPKIG00000021876	chd9	99	77.769	Paramormyrops_kingsleyae
ENSAOCG00000005487	chd9	55	78.920	ENSPSIG00000008099	CHD9	78	78.920	Pelodiscus_sinensis
ENSAOCG00000005487	chd9	86	71.488	ENSPCIG00000017215	CHD9	94	76.459	Phascolarctos_cinereus
ENSAOCG00000005487	chd9	99	90.024	ENSPFOG00000015839	chd9	99	86.800	Poecilia_formosa
ENSAOCG00000005487	chd9	99	90.141	ENSPLAG00000011118	chd9	99	90.865	Poecilia_latipinna
ENSAOCG00000005487	chd9	99	87.601	ENSPMEG00000015106	chd9	99	83.933	Poecilia_mexicana
ENSAOCG00000005487	chd9	97	91.925	ENSPREG00000006473	chd9	99	90.455	Poecilia_reticulata
ENSAOCG00000005487	chd9	67	75.179	ENSPPYG00000007348	CHD9	80	70.733	Pongo_abelii
ENSAOCG00000005487	chd9	72	80.273	ENSPCAG00000007564	CHD9	73	82.193	Procavia_capensis
ENSAOCG00000005487	chd9	67	72.852	ENSPCOG00000028433	CHD9	91	69.014	Propithecus_coquereli
ENSAOCG00000005487	chd9	96	72.601	ENSPVAG00000015617	CHD9	81	74.186	Pteropus_vampyrus
ENSAOCG00000005487	chd9	99	92.552	ENSPNYG00000010947	chd9	99	92.727	Pundamilia_nyererei
ENSAOCG00000005487	chd9	99	78.549	ENSPNAG00000024141	chd9	99	78.486	Pygocentrus_nattereri
ENSAOCG00000005487	chd9	87	68.472	ENSRNOG00000049302	Chd9	94	57.854	Rattus_norvegicus
ENSAOCG00000005487	chd9	99	68.750	ENSRBIG00000035553	CHD9	95	70.985	Rhinopithecus_bieti
ENSAOCG00000005487	chd9	98	69.567	ENSRROG00000033278	CHD9	96	70.997	Rhinopithecus_roxellana
ENSAOCG00000005487	chd9	99	68.725	ENSSBOG00000030240	CHD9	93	69.718	Saimiri_boliviensis_boliviensis
ENSAOCG00000005487	chd9	99	69.515	ENSSHAG00000002719	CHD9	84	71.597	Sarcophilus_harrisii
ENSAOCG00000005487	chd9	99	73.967	ENSSFOG00015001327	chd9	98	74.615	Scleropages_formosus
ENSAOCG00000005487	chd9	96	79.546	ENSSFOG00015020209	chd9	99	77.954	Scleropages_formosus
ENSAOCG00000005487	chd9	97	92.943	ENSSMAG00000008953	chd9	99	92.267	Scophthalmus_maximus
ENSAOCG00000005487	chd9	99	93.229	ENSSDUG00000006139	chd9	99	93.873	Seriola_dumerili
ENSAOCG00000005487	chd9	99	93.793	ENSSLDG00000017818	chd9	99	94.438	Seriola_lalandi_dorsalis
ENSAOCG00000005487	chd9	71	77.694	ENSSARG00000010632	CHD9	55	77.898	Sorex_araneus
ENSAOCG00000005487	chd9	100	97.715	ENSSPAG00000021649	chd9	100	97.715	Stegastes_partitus
ENSAOCG00000005487	chd9	87	73.043	ENSTGUG00000007476	CHD9	86	73.893	Taeniopygia_guttata
ENSAOCG00000005487	chd9	99	86.502	ENSTRUG00000009125	chd9	99	84.510	Takifugu_rubripes
ENSAOCG00000005487	chd9	78	69.794	ENSTNIG00000003825	chd9	84	99.408	Tetraodon_nigroviridis
ENSAOCG00000005487	chd9	61	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSAOCG00000005487	chd9	85	71.755	ENSTTRG00000012674	CHD9	77	71.948	Tursiops_truncatus
ENSAOCG00000005487	chd9	80	86.416	ENSUMAG00000004043	CHD9	94	86.779	Ursus_maritimus
ENSAOCG00000005487	chd9	71	75.909	ENSVPAG00000001374	CHD9	81	69.918	Vicugna_pacos
ENSAOCG00000005487	chd9	67	75.432	ENSVVUG00000019435	CHD9	79	71.213	Vulpes_vulpes
ENSAOCG00000005487	chd9	98	67.252	ENSXETG00000000349	chd9	77	75.746	Xenopus_tropicalis
ENSAOCG00000005487	chd9	99	89.216	ENSXCOG00000012997	chd9	99	89.822	Xiphophorus_couchianus
ENSAOCG00000005487	chd9	99	90.704	ENSXMAG00000016192	chd9	99	91.251	Xiphophorus_maculatus