EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000005514 (Gene tree)
Gene ID: 111583246
Gene Symbol: -
Alias: -
Full Name: prolyl 4-hydroxylase subunit alpha-1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 23166 bases
Position: chrNXFZ01004045.1:96378-119543
Accession: 111583246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000002390	2OG-FeII_Oxy	PF03171.20	4.4e-08	1	1
ENSAOCP00000021021	2OG-FeII_Oxy	PF03171.20	4.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000011598	-	1620	XM_023292233	ENSAOCP00000021021	539 (aa)	XP_023148001	-
ENSAOCT00000011572	-	1763	XM_023292232	ENSAOCP00000002390	534 (aa)	XP_023148000	-

Gene Model

Click here to download ENSAOCG00000005514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000005514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000005514	-	100	86.517	ENSAOCG00000005531	p4ha1a	100	86.517
ENSAOCG00000005514	-	97	75.142	ENSAOCG00000001647	p4ha1b	98	74.212
ENSAOCG00000005514	-	89	66.042	ENSAOCG00000003785	p4ha2	94	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000005514	-	81	69.615	ENSAPOG00000008101	p4ha1a	91	69.615	Acanthochromis_polyacanthus
ENSAOCG00000005514	-	97	84.942	ENSACIG00000014303	p4ha1a	96	87.280	Amphilophus_citrinellus
ENSAOCG00000005514	-	100	99.438	ENSAPEG00000010462	-	100	99.438	Amphiprion_percula
ENSAOCG00000005514	-	99	77.467	ENSAMXG00000018364	p4ha1a	99	77.467	Astyanax_mexicanus
ENSAOCG00000005514	-	96	80.426	ENSCSEG00000001857	-	96	82.770	Cynoglossus_semilaevis
ENSAOCG00000005514	-	100	82.276	ENSCVAG00000020081	p4ha1a	100	82.276	Cyprinodon_variegatus
ENSAOCG00000005514	-	100	75.691	ENSDARG00000033537	p4ha1a	100	75.691	Danio_rerio
ENSAOCG00000005514	-	99	79.592	ENSELUG00000005174	p4ha1a	99	79.592	Esox_lucius
ENSAOCG00000005514	-	99	88.411	ENSMAMG00000010119	p4ha1a	99	88.411	Mastacembelus_armatus
ENSAOCG00000005514	-	96	81.961	ENSMMOG00000009210	-	95	83.661	Mola_mola
ENSAOCG00000005514	-	100	84.444	ENSMALG00000013083	-	100	87.960	Monopterus_albus
ENSAOCG00000005514	-	98	76.718	ENSORLG00000014906	-	94	76.718	Oryzias_latipes
ENSAOCG00000005514	-	99	78.531	ENSORLG00020015227	-	97	78.531	Oryzias_latipes_hni
ENSAOCG00000005514	-	99	78.719	ENSORLG00015012970	-	97	78.719	Oryzias_latipes_hsok
ENSAOCG00000005514	-	99	78.868	ENSOMEG00000019702	-	99	78.868	Oryzias_melastigma
ENSAOCG00000005514	-	99	77.425	ENSPKIG00000002519	p4ha1a	99	77.425	Paramormyrops_kingsleyae
ENSAOCG00000005514	-	99	82.900	ENSPREG00000016136	p4ha1a	99	82.900	Poecilia_reticulata
ENSAOCG00000005514	-	99	77.052	ENSPNAG00000025732	p4ha1a	99	77.323	Pygocentrus_nattereri
ENSAOCG00000005514	-	96	77.927	ENSSFOG00015009731	p4ha1	99	77.009	Scleropages_formosus
ENSAOCG00000005514	-	99	76.938	ENSTNIG00000003570	-	99	76.938	Tetraodon_nigroviridis