EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000005662 (Gene tree)
Gene ID: 111574309
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 6519 bases
Position: chrNXFZ01000632.1:26309-32827
Accession: 111574309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000002522	RtcB	PF01139.17	5.7e-147	1	1
ENSAOCP00000002508	RtcB	PF01139.17	8e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000011330	-	2119	-	ENSAOCP00000002522	460 (aa)	-	-
ENSAOCT00000011361	-	2337	XM_023278844	ENSAOCP00000002508	505 (aa)	XP_023134612	UPI0004982498

Gene Model

Click here to download ENSAOCG00000005662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000005662's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000005662	rtcb	100	95.435	ENSG00000100220	RTCB	100	94.851	Homo_sapiens
ENSAOCG00000005662	rtcb	100	99.604	ENSAPOG00000006040	rtcb	100	99.604	Acanthochromis_polyacanthus
ENSAOCG00000005662	rtcb	100	95.435	ENSAMEG00000016152	RTCB	100	94.851	Ailuropoda_melanoleuca
ENSAOCG00000005662	rtcb	100	93.478	ENSACIG00000009083	rtcb	100	93.465	Amphilophus_citrinellus
ENSAOCG00000005662	rtcb	100	100.000	ENSAPEG00000024701	rtcb	100	100.000	Amphiprion_percula
ENSAOCG00000005662	rtcb	100	95.870	ENSAPEG00000024653	rtcb	100	94.456	Amphiprion_percula
ENSAOCG00000005662	rtcb	100	98.913	ENSATEG00000000618	rtcb	100	98.416	Anabas_testudineus
ENSAOCG00000005662	rtcb	100	94.783	ENSACAG00000014817	RTCB	100	91.522	Anolis_carolinensis
ENSAOCG00000005662	rtcb	100	80.435	ENSANAG00000018191	-	91	79.802	Aotus_nancymaae
ENSAOCG00000005662	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSAOCG00000005662	rtcb	100	97.174	ENSACLG00000008367	rtcb	100	97.174	Astatotilapia_calliptera
ENSAOCG00000005662	rtcb	100	96.957	ENSAMXG00000042320	rtcb	100	96.436	Astyanax_mexicanus
ENSAOCG00000005662	rtcb	100	95.435	ENSBTAG00000011070	RTCB	100	95.050	Bos_taurus
ENSAOCG00000005662	rtcb	100	76.304	WBGene00008877	rtcb-1	100	74.851	Caenorhabditis_elegans
ENSAOCG00000005662	rtcb	100	95.435	ENSCJAG00000006128	RTCB	100	94.653	Callithrix_jacchus
ENSAOCG00000005662	rtcb	100	91.087	ENSCAFG00000010789	-	100	90.693	Canis_familiaris
ENSAOCG00000005662	rtcb	100	95.435	ENSCAFG00000001785	RTCB	100	94.851	Canis_familiaris
ENSAOCG00000005662	rtcb	87	90.909	ENSCAFG00020018953	-	99	90.909	Canis_lupus_dingo
ENSAOCG00000005662	rtcb	100	95.435	ENSCAFG00020004890	-	100	94.851	Canis_lupus_dingo
ENSAOCG00000005662	rtcb	50	71.616	ENSCHIG00000017428	-	100	71.616	Capra_hircus
ENSAOCG00000005662	rtcb	100	95.435	ENSCHIG00000027009	-	100	95.050	Capra_hircus
ENSAOCG00000005662	rtcb	100	95.652	ENSTSYG00000012320	RTCB	100	95.050	Carlito_syrichta
ENSAOCG00000005662	rtcb	100	95.217	ENSCAPG00000011647	RTCB	96	94.340	Cavia_aperea
ENSAOCG00000005662	rtcb	100	95.435	ENSCCAG00000000618	RTCB	100	94.653	Cebus_capucinus
ENSAOCG00000005662	rtcb	100	95.217	ENSCATG00000033424	RTCB	100	94.653	Cercocebus_atys
ENSAOCG00000005662	rtcb	100	95.435	ENSCLAG00000007997	RTCB	100	94.653	Chinchilla_lanigera
ENSAOCG00000005662	rtcb	100	95.217	ENSCSAG00000008351	RTCB	100	94.455	Chlorocebus_sabaeus
ENSAOCG00000005662	rtcb	100	80.990	ENSCHOG00000009123	RTCB	100	80.990	Choloepus_hoffmanni
ENSAOCG00000005662	rtcb	100	94.783	ENSCPBG00000023184	RTCB	100	93.465	Chrysemys_picta_bellii
ENSAOCG00000005662	rtcb	100	86.087	ENSCING00000003830	-	100	83.168	Ciona_intestinalis
ENSAOCG00000005662	rtcb	100	85.870	ENSCSAVG00000008124	-	99	83.366	Ciona_savignyi
ENSAOCG00000005662	rtcb	100	91.087	ENSCANG00000001891	RTCB	100	90.891	Colobus_angolensis_palliatus
ENSAOCG00000005662	rtcb	100	95.217	ENSCGRG00001011173	Rtcb	100	94.851	Cricetulus_griseus_chok1gshd
ENSAOCG00000005662	rtcb	100	95.435	ENSCGRG00000009587	-	96	95.319	Cricetulus_griseus_crigri
ENSAOCG00000005662	rtcb	100	97.609	ENSCSEG00000003986	rtcb	100	97.030	Cynoglossus_semilaevis
ENSAOCG00000005662	rtcb	90	96.394	ENSCVAG00000000569	rtcb	95	96.394	Cyprinodon_variegatus
ENSAOCG00000005662	rtcb	100	97.826	ENSDARG00000101047	rtcb	100	96.832	Danio_rerio
ENSAOCG00000005662	rtcb	80	90.909	ENSDNOG00000012425	RTCB	99	90.909	Dasypus_novemcinctus
ENSAOCG00000005662	rtcb	100	94.783	ENSDORG00000010855	Rtcb	100	94.455	Dipodomys_ordii
ENSAOCG00000005662	rtcb	100	86.957	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSAOCG00000005662	rtcb	100	88.696	ENSETEG00000001988	RTCB	100	88.515	Echinops_telfairi
ENSAOCG00000005662	rtcb	100	86.957	ENSEBUG00000014235	rtcb	100	86.337	Eptatretus_burgeri
ENSAOCG00000005662	rtcb	100	95.435	ENSEASG00005019059	RTCB	100	95.050	Equus_asinus_asinus
ENSAOCG00000005662	rtcb	100	95.435	ENSECAG00000023998	RTCB	100	95.050	Equus_caballus
ENSAOCG00000005662	rtcb	97	85.906	ENSEEUG00000006251	RTCB	100	85.906	Erinaceus_europaeus
ENSAOCG00000005662	rtcb	100	83.554	ENSELUG00000009275	rtcb	100	83.554	Esox_lucius
ENSAOCG00000005662	rtcb	100	95.435	ENSFCAG00000026480	RTCB	100	94.851	Felis_catus
ENSAOCG00000005662	rtcb	100	95.435	ENSFALG00000013334	RTCB	100	94.653	Ficedula_albicollis
ENSAOCG00000005662	rtcb	100	95.435	ENSFDAG00000018150	RTCB	100	94.653	Fukomys_damarensis
ENSAOCG00000005662	rtcb	100	98.478	ENSFHEG00000009595	rtcb	100	97.426	Fundulus_heteroclitus
ENSAOCG00000005662	rtcb	100	94.783	ENSGMOG00000018882	rtcb	100	93.069	Gadus_morhua
ENSAOCG00000005662	rtcb	100	95.217	ENSGALG00000012611	RTCB	100	94.455	Gallus_gallus
ENSAOCG00000005662	rtcb	100	98.478	ENSGAFG00000004198	rtcb	100	97.426	Gambusia_affinis
ENSAOCG00000005662	rtcb	100	97.391	ENSGACG00000000586	rtcb	100	96.832	Gasterosteus_aculeatus
ENSAOCG00000005662	rtcb	92	94.353	ENSGAGG00000019133	RTCB	98	92.553	Gopherus_agassizii
ENSAOCG00000005662	rtcb	100	95.435	ENSGGOG00000011402	RTCB	100	94.851	Gorilla_gorilla
ENSAOCG00000005662	rtcb	100	97.174	ENSHBUG00000020571	rtcb	100	96.436	Haplochromis_burtoni
ENSAOCG00000005662	rtcb	99	67.756	ENSHGLG00000001066	-	99	68.230	Heterocephalus_glaber_female
ENSAOCG00000005662	rtcb	100	95.435	ENSHGLG00000004492	RTCB	100	94.653	Heterocephalus_glaber_female
ENSAOCG00000005662	rtcb	100	95.435	ENSHGLG00100008965	RTCB	100	94.653	Heterocephalus_glaber_male
ENSAOCG00000005662	rtcb	100	95.887	ENSHCOG00000006450	rtcb	100	94.675	Hippocampus_comes
ENSAOCG00000005662	rtcb	100	96.304	ENSIPUG00000015443	rtcb	100	95.446	Ictalurus_punctatus
ENSAOCG00000005662	rtcb	100	95.435	ENSSTOG00000003878	RTCB	100	94.653	Ictidomys_tridecemlineatus
ENSAOCG00000005662	rtcb	100	95.435	ENSJJAG00000010667	Rtcb	100	95.050	Jaculus_jaculus
ENSAOCG00000005662	rtcb	100	99.130	ENSKMAG00000013178	rtcb	100	97.624	Kryptolebias_marmoratus
ENSAOCG00000005662	rtcb	100	98.696	ENSLBEG00000010566	RTCB	100	97.426	Labrus_bergylta
ENSAOCG00000005662	rtcb	100	97.391	ENSLBEG00000000214	rtcb	100	96.238	Labrus_bergylta
ENSAOCG00000005662	rtcb	100	96.087	ENSLACG00000013033	RTCB	100	94.851	Latimeria_chalumnae
ENSAOCG00000005662	rtcb	100	97.174	ENSLOCG00000016515	rtcb	99	96.238	Lepisosteus_oculatus
ENSAOCG00000005662	rtcb	100	95.217	ENSLAFG00000002082	RTCB	100	94.653	Loxodonta_africana
ENSAOCG00000005662	rtcb	100	95.217	ENSMFAG00000034419	RTCB	100	94.455	Macaca_fascicularis
ENSAOCG00000005662	rtcb	100	95.217	ENSMMUG00000006720	RTCB	100	94.455	Macaca_mulatta
ENSAOCG00000005662	rtcb	100	95.217	ENSMNEG00000040669	RTCB	100	94.455	Macaca_nemestrina
ENSAOCG00000005662	rtcb	100	95.217	ENSMLEG00000040505	RTCB	100	94.653	Mandrillus_leucophaeus
ENSAOCG00000005662	rtcb	100	98.478	ENSMAMG00000020676	rtcb	100	98.020	Mastacembelus_armatus
ENSAOCG00000005662	rtcb	100	97.174	ENSMZEG00005018942	rtcb	100	96.436	Maylandia_zebra
ENSAOCG00000005662	rtcb	100	94.805	ENSMGAG00000012805	RTCB	100	94.083	Meleagris_gallopavo
ENSAOCG00000005662	rtcb	62	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSAOCG00000005662	rtcb	100	95.435	ENSMICG00000013303	-	100	94.653	Microcebus_murinus
ENSAOCG00000005662	rtcb	100	76.522	ENSMICG00000036677	-	100	75.446	Microcebus_murinus
ENSAOCG00000005662	rtcb	100	95.652	ENSMOCG00000002440	Rtcb	100	95.248	Microtus_ochrogaster
ENSAOCG00000005662	rtcb	100	98.913	ENSMMOG00000005987	rtcb	100	98.218	Mola_mola
ENSAOCG00000005662	rtcb	100	95.217	ENSMODG00000001414	RTCB	100	94.653	Monodelphis_domestica
ENSAOCG00000005662	rtcb	100	98.261	ENSMALG00000007603	rtcb	100	97.228	Monopterus_albus
ENSAOCG00000005662	rtcb	100	95.435	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.851	Mus_caroli
ENSAOCG00000005662	rtcb	100	95.435	ENSMUSG00000001783	Rtcb	100	94.851	Mus_musculus
ENSAOCG00000005662	rtcb	100	95.435	MGP_PahariEiJ_G0031396	Rtcb	100	94.851	Mus_pahari
ENSAOCG00000005662	rtcb	100	95.435	MGP_SPRETEiJ_G0016507	Rtcb	100	94.851	Mus_spretus
ENSAOCG00000005662	rtcb	100	95.435	ENSMPUG00000012285	RTCB	100	94.851	Mustela_putorius_furo
ENSAOCG00000005662	rtcb	100	93.043	ENSMLUG00000007803	RTCB	100	92.110	Myotis_lucifugus
ENSAOCG00000005662	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSAOCG00000005662	rtcb	100	97.391	ENSNBRG00000017202	rtcb	100	96.832	Neolamprologus_brichardi
ENSAOCG00000005662	rtcb	100	95.435	ENSNLEG00000004960	RTCB	100	94.851	Nomascus_leucogenys
ENSAOCG00000005662	rtcb	86	99.107	ENSMEUG00000007809	-	79	99.107	Notamacropus_eugenii
ENSAOCG00000005662	rtcb	73	97.500	ENSOPRG00000003488	RTCB	79	97.500	Ochotona_princeps
ENSAOCG00000005662	rtcb	100	63.366	ENSODEG00000005042	-	100	63.366	Octodon_degus
ENSAOCG00000005662	rtcb	87	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSAOCG00000005662	rtcb	100	98.261	ENSONIG00000007474	rtcb	100	97.228	Oreochromis_niloticus
ENSAOCG00000005662	rtcb	100	95.000	ENSOANG00000005524	RTCB	100	94.257	Ornithorhynchus_anatinus
ENSAOCG00000005662	rtcb	93	94.468	ENSOCUG00000008270	RTCB	96	94.468	Oryctolagus_cuniculus
ENSAOCG00000005662	rtcb	100	98.043	ENSORLG00000020093	rtcb	100	96.436	Oryzias_latipes
ENSAOCG00000005662	rtcb	100	98.043	ENSORLG00020003706	rtcb	100	96.436	Oryzias_latipes_hni
ENSAOCG00000005662	rtcb	100	98.261	ENSORLG00015002968	rtcb	100	96.634	Oryzias_latipes_hsok
ENSAOCG00000005662	rtcb	100	97.826	ENSOMEG00000021278	rtcb	100	96.238	Oryzias_melastigma
ENSAOCG00000005662	rtcb	100	94.783	ENSOGAG00000001425	RTCB	100	94.059	Otolemur_garnettii
ENSAOCG00000005662	rtcb	100	95.435	ENSOARG00000018008	RTCB	100	95.050	Ovis_aries
ENSAOCG00000005662	rtcb	100	95.435	ENSPPAG00000028667	RTCB	100	94.851	Pan_paniscus
ENSAOCG00000005662	rtcb	100	95.435	ENSPPRG00000004038	RTCB	100	94.851	Panthera_pardus
ENSAOCG00000005662	rtcb	100	90.652	ENSPTIG00000020499	RTCB	97	91.579	Panthera_tigris_altaica
ENSAOCG00000005662	rtcb	100	95.435	ENSPTRG00000014287	RTCB	100	94.851	Pan_troglodytes
ENSAOCG00000005662	rtcb	100	95.217	ENSPANG00000016035	RTCB	100	94.455	Papio_anubis
ENSAOCG00000005662	rtcb	100	96.739	ENSPKIG00000001881	rtcb	100	95.842	Paramormyrops_kingsleyae
ENSAOCG00000005662	rtcb	100	94.348	ENSPSIG00000011690	RTCB	100	94.348	Pelodiscus_sinensis
ENSAOCG00000005662	rtcb	100	97.391	ENSPMGG00000016672	rtcb	100	97.228	Periophthalmus_magnuspinnatus
ENSAOCG00000005662	rtcb	100	95.435	ENSPEMG00000019548	Rtcb	100	94.851	Peromyscus_maniculatus_bairdii
ENSAOCG00000005662	rtcb	100	93.043	ENSPMAG00000005657	rtcb	100	91.881	Petromyzon_marinus
ENSAOCG00000005662	rtcb	100	95.217	ENSPCIG00000009467	RTCB	100	94.653	Phascolarctos_cinereus
ENSAOCG00000005662	rtcb	100	98.913	ENSPFOG00000003058	rtcb	100	97.822	Poecilia_formosa
ENSAOCG00000005662	rtcb	100	98.696	ENSPLAG00000017663	rtcb	100	97.624	Poecilia_latipinna
ENSAOCG00000005662	rtcb	100	98.913	ENSPMEG00000006227	rtcb	100	97.822	Poecilia_mexicana
ENSAOCG00000005662	rtcb	100	98.696	ENSPREG00000018467	rtcb	100	97.426	Poecilia_reticulata
ENSAOCG00000005662	rtcb	100	95.435	ENSPPYG00000011752	RTCB	100	94.851	Pongo_abelii
ENSAOCG00000005662	rtcb	93	78.390	ENSPCAG00000013641	RTCB	100	78.390	Procavia_capensis
ENSAOCG00000005662	rtcb	100	95.435	ENSPCOG00000017243	RTCB	100	94.653	Propithecus_coquereli
ENSAOCG00000005662	rtcb	93	93.830	ENSPVAG00000002380	RTCB	100	93.830	Pteropus_vampyrus
ENSAOCG00000005662	rtcb	100	97.174	ENSPNYG00000022760	rtcb	100	96.436	Pundamilia_nyererei
ENSAOCG00000005662	rtcb	100	96.739	ENSPNAG00000009209	rtcb	100	96.238	Pygocentrus_nattereri
ENSAOCG00000005662	rtcb	100	95.435	ENSRNOG00000004813	Rtcb	100	94.851	Rattus_norvegicus
ENSAOCG00000005662	rtcb	100	86.759	ENSRBIG00000042090	RTCB	100	86.759	Rhinopithecus_bieti
ENSAOCG00000005662	rtcb	99	91.485	ENSSBOG00000020085	-	100	89.901	Saimiri_boliviensis_boliviensis
ENSAOCG00000005662	rtcb	100	95.435	ENSSHAG00000016277	RTCB	100	95.148	Sarcophilus_harrisii
ENSAOCG00000005662	rtcb	100	97.826	ENSSFOG00015000763	rtcb	100	96.238	Scleropages_formosus
ENSAOCG00000005662	rtcb	100	94.783	ENSSFOG00015011572	RTCB	100	94.257	Scleropages_formosus
ENSAOCG00000005662	rtcb	100	94.783	ENSSMAG00000005096	rtcb	100	94.257	Scophthalmus_maximus
ENSAOCG00000005662	rtcb	100	97.609	ENSSDUG00000012605	rtcb	100	97.426	Seriola_dumerili
ENSAOCG00000005662	rtcb	100	97.609	ENSSLDG00000019458	rtcb	100	97.228	Seriola_lalandi_dorsalis
ENSAOCG00000005662	rtcb	70	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSAOCG00000005662	rtcb	100	94.783	ENSSPUG00000012814	RTCB	100	93.465	Sphenodon_punctatus
ENSAOCG00000005662	rtcb	100	100.000	ENSSPAG00000004623	rtcb	100	100.000	Stegastes_partitus
ENSAOCG00000005662	rtcb	100	95.435	ENSSSCG00000000158	RTCB	100	94.851	Sus_scrofa
ENSAOCG00000005662	rtcb	100	95.435	ENSTGUG00000010947	RTCB	99	94.653	Taeniopygia_guttata
ENSAOCG00000005662	rtcb	100	98.043	ENSTRUG00000009880	rtcb	100	98.043	Takifugu_rubripes
ENSAOCG00000005662	rtcb	100	96.522	ENSTNIG00000002484	rtcb	100	96.436	Tetraodon_nigroviridis
ENSAOCG00000005662	rtcb	97	86.130	ENSTBEG00000004418	RTCB	100	81.980	Tupaia_belangeri
ENSAOCG00000005662	rtcb	93	93.617	ENSTTRG00000006417	RTCB	100	93.617	Tursiops_truncatus
ENSAOCG00000005662	rtcb	100	95.435	ENSUAMG00000022792	RTCB	100	94.851	Ursus_americanus
ENSAOCG00000005662	rtcb	100	95.435	ENSUMAG00000017225	RTCB	100	94.851	Ursus_maritimus
ENSAOCG00000005662	rtcb	100	95.217	ENSVPAG00000005375	RTCB	100	94.653	Vicugna_pacos
ENSAOCG00000005662	rtcb	100	95.435	ENSVVUG00000023408	RTCB	100	95.086	Vulpes_vulpes
ENSAOCG00000005662	rtcb	100	94.348	ENSXETG00000011523	rtcb	100	93.663	Xenopus_tropicalis
ENSAOCG00000005662	rtcb	50	96.507	ENSXCOG00000011944	rtcb	100	96.507	Xiphophorus_couchianus
ENSAOCG00000005662	rtcb	100	98.696	ENSXMAG00000002855	rtcb	100	97.426	Xiphophorus_maculatus