EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000005886 (Gene tree)
Gene ID: 111564961
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 71886 bases
Position: chrNXFZ01006366.1:96382-168267
Accession: 111564961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000002732	PPR	PF01535.20	8.1e-35	1	6
ENSAOCP00000002732	PPR	PF01535.20	8.1e-35	2	6
ENSAOCP00000002732	PPR	PF01535.20	8.1e-35	3	6
ENSAOCP00000002732	PPR	PF01535.20	8.1e-35	4	6
ENSAOCP00000002732	PPR	PF01535.20	8.1e-35	5	6
ENSAOCP00000002732	PPR	PF01535.20	8.1e-35	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000010982	-	4558	XM_023264856	ENSAOCP00000002732	1429 (aa)	XP_023120624	UPI000C301A38

Gene Model

Click here to download ENSAOCG00000005886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000005886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000005886	lrpprc	100	90.553	ENSAPOG00000016610	lrpprc	100	90.483	Acanthochromis_polyacanthus
ENSAOCG00000005886	lrpprc	96	51.332	ENSAMEG00000005852	LRPPRC	99	51.404	Ailuropoda_melanoleuca
ENSAOCG00000005886	lrpprc	100	74.685	ENSACIG00000009604	lrpprc	99	74.685	Amphilophus_citrinellus
ENSAOCG00000005886	lrpprc	100	92.598	ENSAPEG00000002937	lrpprc	98	92.598	Amphiprion_percula
ENSAOCG00000005886	lrpprc	100	58.873	ENSATEG00000010555	lrpprc	95	73.093	Anabas_testudineus
ENSAOCG00000005886	lrpprc	94	56.186	ENSACAG00000029278	LRPPRC	99	54.552	Anolis_carolinensis
ENSAOCG00000005886	lrpprc	99	50.734	ENSANAG00000027440	LRPPRC	97	57.143	Aotus_nancymaae
ENSAOCG00000005886	lrpprc	96	73.381	ENSACLG00000023712	lrpprc	92	83.298	Astatotilapia_calliptera
ENSAOCG00000005886	lrpprc	99	50.908	ENSCJAG00000000794	LRPPRC	97	57.223	Callithrix_jacchus
ENSAOCG00000005886	lrpprc	97	51.820	ENSCHIG00000020173	LRPPRC	99	51.965	Capra_hircus
ENSAOCG00000005886	lrpprc	94	41.653	ENSCAPG00000013631	LRPPRC	99	41.653	Cavia_aperea
ENSAOCG00000005886	lrpprc	85	50.774	ENSCPOG00000000204	LRPPRC	99	50.774	Cavia_porcellus
ENSAOCG00000005886	lrpprc	99	50.804	ENSCCAG00000031900	LRPPRC	97	56.822	Cebus_capucinus
ENSAOCG00000005886	lrpprc	95	51.679	ENSCATG00000014187	LRPPRC	97	56.579	Cercocebus_atys
ENSAOCG00000005886	lrpprc	99	50.349	ENSCLAG00000005203	LRPPRC	99	50.594	Chinchilla_lanigera
ENSAOCG00000005886	lrpprc	95	52.263	ENSCSAG00000013233	LRPPRC	97	52.263	Chlorocebus_sabaeus
ENSAOCG00000005886	lrpprc	83	50.993	ENSCHOG00000003631	LRPPRC	84	50.993	Choloepus_hoffmanni
ENSAOCG00000005886	lrpprc	94	50.037	ENSCANG00000034961	LRPPRC	99	60.727	Colobus_angolensis_palliatus
ENSAOCG00000005886	lrpprc	99	50.000	ENSCGRG00001016261	Lrpprc	99	50.420	Cricetulus_griseus_chok1gshd
ENSAOCG00000005886	lrpprc	99	50.000	ENSCGRG00000004072	Lrpprc	99	50.420	Cricetulus_griseus_crigri
ENSAOCG00000005886	lrpprc	100	51.586	ENSCSEG00000003850	lrpprc	96	58.789	Cynoglossus_semilaevis
ENSAOCG00000005886	lrpprc	100	78.741	ENSCVAG00000012967	lrpprc	100	78.741	Cyprinodon_variegatus
ENSAOCG00000005886	lrpprc	99	58.044	ENSDARG00000043970	lrpprc	98	58.044	Danio_rerio
ENSAOCG00000005886	lrpprc	99	50.665	ENSDNOG00000012594	-	99	51.015	Dasypus_novemcinctus
ENSAOCG00000005886	lrpprc	77	42.793	ENSDNOG00000032336	-	95	42.973	Dasypus_novemcinctus
ENSAOCG00000005886	lrpprc	96	52.381	ENSDORG00000012233	Lrpprc	99	51.678	Dipodomys_ordii
ENSAOCG00000005886	lrpprc	94	52.321	ENSETEG00000006657	LRPPRC	99	51.120	Echinops_telfairi
ENSAOCG00000005886	lrpprc	82	43.408	ENSEEUG00000012340	LRPPRC	91	43.408	Erinaceus_europaeus
ENSAOCG00000005886	lrpprc	93	63.303	ENSELUG00000012803	lrpprc	95	63.303	Esox_lucius
ENSAOCG00000005886	lrpprc	99	51.924	ENSFCAG00000013468	LRPPRC	99	52.241	Felis_catus
ENSAOCG00000005886	lrpprc	94	49.518	ENSFALG00000012738	LRPPRC	99	49.370	Ficedula_albicollis
ENSAOCG00000005886	lrpprc	99	48.713	ENSFDAG00000015328	LRPPRC	99	48.713	Fukomys_damarensis
ENSAOCG00000005886	lrpprc	100	76.713	ENSFHEG00000019604	lrpprc	100	76.746	Fundulus_heteroclitus
ENSAOCG00000005886	lrpprc	99	64.110	ENSGMOG00000008337	lrpprc	99	64.110	Gadus_morhua
ENSAOCG00000005886	lrpprc	99	75.579	ENSGAFG00000001455	lrpprc	99	75.579	Gambusia_affinis
ENSAOCG00000005886	lrpprc	99	71.458	ENSGACG00000010679	lrpprc	99	73.622	Gasterosteus_aculeatus
ENSAOCG00000005886	lrpprc	100	81.329	ENSHBUG00000000393	lrpprc	98	81.329	Haplochromis_burtoni
ENSAOCG00000005886	lrpprc	99	49.233	ENSHGLG00000006123	LRPPRC	99	49.233	Heterocephalus_glaber_female
ENSAOCG00000005886	lrpprc	59	47.468	ENSHGLG00100005960	-	99	47.468	Heterocephalus_glaber_male
ENSAOCG00000005886	lrpprc	97	72.994	ENSHCOG00000002107	lrpprc	100	72.994	Hippocampus_comes
ENSAOCG00000005886	lrpprc	99	63.176	ENSIPUG00000009406	lrpprc	99	63.037	Ictalurus_punctatus
ENSAOCG00000005886	lrpprc	99	50.803	ENSSTOG00000011185	LRPPRC	99	50.942	Ictidomys_tridecemlineatus
ENSAOCG00000005886	lrpprc	94	51.513	ENSJJAG00000020475	Lrpprc	99	50.175	Jaculus_jaculus
ENSAOCG00000005886	lrpprc	99	65.390	ENSKMAG00000003287	lrpprc	85	65.390	Kryptolebias_marmoratus
ENSAOCG00000005886	lrpprc	100	64.665	ENSLBEG00000023225	lrpprc	96	73.152	Labrus_bergylta
ENSAOCG00000005886	lrpprc	100	57.478	ENSLACG00000014030	LRPPRC	100	57.478	Latimeria_chalumnae
ENSAOCG00000005886	lrpprc	99	61.695	ENSLOCG00000016390	lrpprc	97	61.695	Lepisosteus_oculatus
ENSAOCG00000005886	lrpprc	99	49.128	ENSLAFG00000008614	LRPPRC	99	49.128	Loxodonta_africana
ENSAOCG00000005886	lrpprc	95	51.971	ENSMFAG00000041560	LRPPRC	99	76.382	Macaca_fascicularis
ENSAOCG00000005886	lrpprc	95	51.276	ENSMMUG00000019841	LRPPRC	99	55.449	Macaca_mulatta
ENSAOCG00000005886	lrpprc	95	51.971	ENSMNEG00000031613	LRPPRC	97	56.767	Macaca_nemestrina
ENSAOCG00000005886	lrpprc	92	76.953	ENSMAMG00000021835	lrpprc	91	76.953	Mastacembelus_armatus
ENSAOCG00000005886	lrpprc	100	81.399	ENSMZEG00005027379	lrpprc	99	81.399	Maylandia_zebra
ENSAOCG00000005886	lrpprc	99	50.140	ENSMAUG00000012118	Lrpprc	99	50.933	Mesocricetus_auratus
ENSAOCG00000005886	lrpprc	99	51.013	ENSMICG00000010486	LRPPRC	97	56.203	Microcebus_murinus
ENSAOCG00000005886	lrpprc	99	50.700	ENSMOCG00000006048	Lrpprc	99	50.630	Microtus_ochrogaster
ENSAOCG00000005886	lrpprc	100	70.957	ENSMMOG00000007830	lrpprc	94	78.039	Mola_mola
ENSAOCG00000005886	lrpprc	94	52.311	ENSMODG00000000648	LRPPRC	99	52.311	Monodelphis_domestica
ENSAOCG00000005886	lrpprc	100	71.049	ENSMALG00000001271	lrpprc	99	71.049	Monopterus_albus
ENSAOCG00000005886	lrpprc	95	53.749	ENSMPUG00000011800	LRPPRC	99	52.760	Mustela_putorius_furo
ENSAOCG00000005886	lrpprc	96	52.302	ENSMLUG00000010575	LRPPRC	99	51.431	Myotis_lucifugus
ENSAOCG00000005886	lrpprc	99	51.332	ENSNGAG00000013069	Lrpprc	99	51.192	Nannospalax_galili
ENSAOCG00000005886	lrpprc	94	72.115	ENSNBRG00000013202	lrpprc	92	80.973	Neolamprologus_brichardi
ENSAOCG00000005886	lrpprc	99	49.965	ENSNLEG00000016782	LRPPRC	96	56.579	Nomascus_leucogenys
ENSAOCG00000005886	lrpprc	87	51.667	ENSOPRG00000016774	LRPPRC	92	45.892	Ochotona_princeps
ENSAOCG00000005886	lrpprc	94	51.694	ENSODEG00000011211	LRPPRC	99	50.280	Octodon_degus
ENSAOCG00000005886	lrpprc	100	81.329	ENSONIG00000000917	lrpprc	100	79.636	Oreochromis_niloticus
ENSAOCG00000005886	lrpprc	74	47.254	ENSOANG00000014670	-	100	46.999	Ornithorhynchus_anatinus
ENSAOCG00000005886	lrpprc	99	51.568	ENSOCUG00000015046	LRPPRC	96	51.638	Oryctolagus_cuniculus
ENSAOCG00000005886	lrpprc	100	71.997	ENSORLG00000004605	lrpprc	99	69.422	Oryzias_latipes
ENSAOCG00000005886	lrpprc	92	75.475	ENSORLG00020012536	lrpprc	99	75.258	Oryzias_latipes_hni
ENSAOCG00000005886	lrpprc	96	76.803	ENSORLG00015018270	lrpprc	100	76.803	Oryzias_latipes_hsok
ENSAOCG00000005886	lrpprc	95	51.232	ENSOGAG00000012798	LRPPRC	99	50.666	Otolemur_garnettii
ENSAOCG00000005886	lrpprc	95	52.562	ENSOARG00000006522	LRPPRC	99	51.538	Ovis_aries
ENSAOCG00000005886	lrpprc	99	49.199	ENSPPAG00000040876	LRPPRC	97	56.473	Pan_paniscus
ENSAOCG00000005886	lrpprc	99	52.235	ENSPPRG00000006578	LRPPRC	99	52.304	Panthera_pardus
ENSAOCG00000005886	lrpprc	95	53.031	ENSPTIG00000000933	LRPPRC	97	53.104	Panthera_tigris_altaica
ENSAOCG00000005886	lrpprc	99	50.314	ENSPTRG00000011880	LRPPRC	97	56.611	Pan_troglodytes
ENSAOCG00000005886	lrpprc	95	51.825	ENSPANG00000020731	LRPPRC	97	56.203	Papio_anubis
ENSAOCG00000005886	lrpprc	95	47.982	ENSPKIG00000022232	lrpprc	97	59.496	Paramormyrops_kingsleyae
ENSAOCG00000005886	lrpprc	61	53.934	ENSPSIG00000006830	-	99	54.162	Pelodiscus_sinensis
ENSAOCG00000005886	lrpprc	67	64.196	ENSPMGG00000016597	lrpprc	97	64.196	Periophthalmus_magnuspinnatus
ENSAOCG00000005886	lrpprc	93	46.887	ENSPMAG00000002147	lrpprc	99	46.887	Petromyzon_marinus
ENSAOCG00000005886	lrpprc	99	74.719	ENSPFOG00000011227	lrpprc	99	74.719	Poecilia_formosa
ENSAOCG00000005886	lrpprc	99	74.719	ENSPLAG00000004018	lrpprc	99	74.719	Poecilia_latipinna
ENSAOCG00000005886	lrpprc	99	74.508	ENSPMEG00000016425	lrpprc	99	74.508	Poecilia_mexicana
ENSAOCG00000005886	lrpprc	99	74.455	ENSPREG00000003662	lrpprc	99	74.455	Poecilia_reticulata
ENSAOCG00000005886	lrpprc	58	47.491	ENSPPYG00000029532	-	99	47.368	Pongo_abelii
ENSAOCG00000005886	lrpprc	82	52.429	ENSPCAG00000001430	LRPPRC	84	52.588	Procavia_capensis
ENSAOCG00000005886	lrpprc	99	49.510	ENSPVAG00000002007	LRPPRC	99	49.510	Pteropus_vampyrus
ENSAOCG00000005886	lrpprc	100	70.588	ENSPNYG00000000756	lrpprc	90	81.529	Pundamilia_nyererei
ENSAOCG00000005886	lrpprc	99	65.436	ENSPNAG00000002895	lrpprc	99	65.436	Pygocentrus_nattereri
ENSAOCG00000005886	lrpprc	94	51.031	ENSRNOG00000005877	Lrpprc	99	50.105	Rattus_norvegicus
ENSAOCG00000005886	lrpprc	95	50.545	ENSRBIG00000031552	LRPPRC	99	49.617	Rhinopithecus_bieti
ENSAOCG00000005886	lrpprc	99	50.910	ENSSBOG00000011807	LRPPRC	97	57.143	Saimiri_boliviensis_boliviensis
ENSAOCG00000005886	lrpprc	94	51.401	ENSSHAG00000018725	LRPPRC	99	51.401	Sarcophilus_harrisii
ENSAOCG00000005886	lrpprc	99	56.630	ENSSFOG00015001042	lrpprc	99	56.630	Scleropages_formosus
ENSAOCG00000005886	lrpprc	100	74.214	ENSSDUG00000019062	lrpprc	99	74.214	Seriola_dumerili
ENSAOCG00000005886	lrpprc	100	68.977	ENSSLDG00000023028	lrpprc	100	69.967	Seriola_lalandi_dorsalis
ENSAOCG00000005886	lrpprc	90	49.271	ENSSARG00000000426	LRPPRC	99	49.271	Sorex_araneus
ENSAOCG00000005886	lrpprc	100	70.511	ENSSPAG00000000162	lrpprc	100	70.519	Stegastes_partitus
ENSAOCG00000005886	lrpprc	99	50.805	ENSSSCG00000008452	LRPPRC	99	50.805	Sus_scrofa
ENSAOCG00000005886	lrpprc	93	47.309	ENSTGUG00000003759	LRPPRC	99	47.309	Taeniopygia_guttata
ENSAOCG00000005886	lrpprc	99	71.077	ENSTRUG00000008409	lrpprc	96	71.000	Takifugu_rubripes
ENSAOCG00000005886	lrpprc	99	69.769	ENSTNIG00000007470	lrpprc	100	70.640	Tetraodon_nigroviridis
ENSAOCG00000005886	lrpprc	99	49.300	ENSTTRG00000006403	LRPPRC	99	49.300	Tursiops_truncatus
ENSAOCG00000005886	lrpprc	94	49.153	ENSVPAG00000008993	LRPPRC	99	49.153	Vicugna_pacos
ENSAOCG00000005886	lrpprc	97	57.286	ENSXETG00000009296	lrpprc	99	57.714	Xenopus_tropicalis
ENSAOCG00000005886	lrpprc	98	69.275	ENSXCOG00000013343	lrpprc	95	70.254	Xiphophorus_couchianus
ENSAOCG00000005886	lrpprc	99	75.299	ENSXMAG00000018108	lrpprc	99	75.299	Xiphophorus_maculatus