EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000005997 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 8543 bases
Position: chrNXFZ01006163.1:103551-112093
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000002834	RRM_1	PF00076.22	1.2e-27	1	2
ENSAOCP00000002834	RRM_1	PF00076.22	1.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000010827	-	525	-	ENSAOCP00000002834	174 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000005997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000005997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000005997	srsf4	90	42.945	ENSAOCG00000002992	srsf9	65	43.210
ENSAOCG00000005997	srsf4	92	76.829	ENSAOCG00000004309	-	52	75.000
ENSAOCG00000005997	srsf4	92	63.529	ENSAOCG00000005719	srsf5b	58	64.912
ENSAOCG00000005997	srsf4	94	43.678	ENSAOCG00000000337	-	67	45.509
ENSAOCG00000005997	srsf4	91	60.843	ENSAOCG00000014967	srsf5a	57	62.048
ENSAOCG00000005997	srsf4	94	45.562	ENSAOCG00000010671	-	68	46.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000005997	srsf4	92	76.220	ENSAPOG00000023399	-	55	74.390	Acanthochromis_polyacanthus
ENSAOCG00000005997	srsf4	92	92.500	ENSACIG00000018649	srsf4	90	92.437	Amphilophus_citrinellus
ENSAOCG00000005997	srsf4	50	98.851	ENSAPEG00000020870	-	67	98.851	Amphiprion_percula
ENSAOCG00000005997	srsf4	90	92.683	ENSATEG00000005680	srsf4	55	92.683	Anabas_testudineus
ENSAOCG00000005997	srsf4	92	90.000	ENSACLG00000003395	srsf4	64	98.701	Astatotilapia_calliptera
ENSAOCG00000005997	srsf4	92	90.062	ENSAMXG00000034811	srsf4	70	91.549	Astyanax_mexicanus
ENSAOCG00000005997	srsf4	91	50.538	WBGene00004698	rsp-1	98	49.655	Caenorhabditis_elegans
ENSAOCG00000005997	srsf4	90	57.386	ENSCING00000020631	-	72	56.250	Ciona_intestinalis
ENSAOCG00000005997	srsf4	91	54.749	ENSCING00000024718	-	52	53.107	Ciona_intestinalis
ENSAOCG00000005997	srsf4	96	53.125	ENSCING00000011362	-	65	55.135	Ciona_intestinalis
ENSAOCG00000005997	srsf4	90	58.791	ENSCING00000012370	-	62	57.692	Ciona_intestinalis
ENSAOCG00000005997	srsf4	90	64.815	ENSCSAVG00000002581	-	60	64.198	Ciona_savignyi
ENSAOCG00000005997	srsf4	92	87.059	ENSCSEG00000010058	srsf4	75	95.041	Cynoglossus_semilaevis
ENSAOCG00000005997	srsf4	92	83.636	ENSDARG00000105293	srsf4	66	94.286	Danio_rerio
ENSAOCG00000005997	srsf4	90	62.500	FBgn0004587	B52	95	59.375	Drosophila_melanogaster
ENSAOCG00000005997	srsf4	80	60.714	ENSEBUG00000003129	srsf4	56	65.600	Eptatretus_burgeri
ENSAOCG00000005997	srsf4	94	57.988	ENSEBUG00000001681	srsf4	64	57.396	Eptatretus_burgeri
ENSAOCG00000005997	srsf4	92	77.841	ENSELUG00000017551	srsf4	95	73.485	Esox_lucius
ENSAOCG00000005997	srsf4	92	95.031	ENSFHEG00000007472	srsf4	90	98.810	Fundulus_heteroclitus
ENSAOCG00000005997	srsf4	92	88.272	ENSGMOG00000012906	srsf4	52	87.037	Gadus_morhua
ENSAOCG00000005997	srsf4	92	95.652	ENSGAFG00000018496	srsf4	59	80.723	Gambusia_affinis
ENSAOCG00000005997	srsf4	92	93.210	ENSGACG00000002389	srsf4	51	90.123	Gasterosteus_aculeatus
ENSAOCG00000005997	srsf4	92	89.881	ENSHCOG00000012540	srsf4	62	86.905	Hippocampus_comes
ENSAOCG00000005997	srsf4	92	92.121	ENSKMAG00000013631	srsf4	75	76.562	Kryptolebias_marmoratus
ENSAOCG00000005997	srsf4	92	96.875	ENSMAMG00000004888	srsf4	70	95.833	Mastacembelus_armatus
ENSAOCG00000005997	srsf4	92	90.000	ENSMZEG00005026275	srsf4	64	98.701	Maylandia_zebra
ENSAOCG00000005997	srsf4	92	90.625	ENSMMOG00000013653	srsf4	57	86.250	Mola_mola
ENSAOCG00000005997	srsf4	92	86.420	ENSMODG00000011052	SRSF4	50	83.333	Monodelphis_domestica
ENSAOCG00000005997	srsf4	92	93.827	ENSMALG00000013392	srsf4	60	89.375	Monopterus_albus
ENSAOCG00000005997	srsf4	92	69.325	ENSNLEG00000030787	-	57	68.750	Nomascus_leucogenys
ENSAOCG00000005997	srsf4	92	96.296	ENSORLG00020016052	srsf4	60	96.296	Oryzias_latipes_hni
ENSAOCG00000005997	srsf4	92	96.296	ENSORLG00015007566	srsf4	64	96.296	Oryzias_latipes_hsok
ENSAOCG00000005997	srsf4	92	86.127	ENSPMGG00000013436	srsf4	95	89.764	Periophthalmus_magnuspinnatus
ENSAOCG00000005997	srsf4	92	65.476	ENSPMAG00000009397	srsf4	62	64.881	Petromyzon_marinus
ENSAOCG00000005997	srsf4	92	95.652	ENSPLAG00000008812	srsf4	58	79.518	Poecilia_latipinna
ENSAOCG00000005997	srsf4	92	89.091	ENSPNYG00000003796	srsf4	51	90.909	Pundamilia_nyererei
ENSAOCG00000005997	srsf4	92	91.250	ENSSFOG00015020292	srsf4	72	97.403	Scleropages_formosus
ENSAOCG00000005997	srsf4	92	76.250	ENSSLDG00000009745	srsf4	55	76.250	Seriola_lalandi_dorsalis
ENSAOCG00000005997	srsf4	92	95.652	ENSSPAG00000014538	srsf4	83	97.479	Stegastes_partitus
ENSAOCG00000005997	srsf4	92	94.375	ENSTRUG00000011891	srsf4	57	82.386	Takifugu_rubripes
ENSAOCG00000005997	srsf4	92	92.771	ENSXCOG00000018826	srsf4	89	93.220	Xiphophorus_couchianus
ENSAOCG00000005997	srsf4	92	70.520	ENSXCOG00000003212	-	51	69.364	Xiphophorus_couchianus
ENSAOCG00000005997	srsf4	50	94.253	ENSXMAG00000021549	-	62	100.000	Xiphophorus_maculatus