EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000006023 (Gene tree)
Gene ID: 111581253
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 15393 bases
Position: chrNXFZ01003693.1:7484-22876
Accession: 111581253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000002832	GTP_EFTU	PF00009.27	5.7e-63	1	1
ENSAOCP00000002832	GTP_EFTU_D2	PF03144.25	3.6e-17	1	1
ENSAOCP00000002832	EFG_IV	PF03764.18	7.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000010825	-	3394	XM_023289365	ENSAOCP00000002832	747 (aa)	XP_023145133	UPI000C30DDF5

Gene Model

Click here to download ENSAOCG00000006023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000006023	gfm1	51	32.692	ENSAOCG00000006219	guf1	59	32.692
ENSAOCG00000006023	gfm1	98	33.631	ENSAOCG00000014342	gfm2	97	33.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006023	gfm1	97	79.178	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSAOCG00000006023	gfm1	93	95.415	ENSAPOG00000016489	gfm1	99	95.415	Acanthochromis_polyacanthus
ENSAOCG00000006023	gfm1	95	80.785	ENSAMEG00000013542	GFM1	99	78.476	Ailuropoda_melanoleuca
ENSAOCG00000006023	gfm1	97	85.379	ENSACIG00000014465	gfm1	94	85.379	Amphilophus_citrinellus
ENSAOCG00000006023	gfm1	100	99.732	ENSAPEG00000024499	gfm1	100	99.732	Amphiprion_percula
ENSAOCG00000006023	gfm1	100	89.171	ENSATEG00000013789	gfm1	100	89.171	Anabas_testudineus
ENSAOCG00000006023	gfm1	97	79.448	ENSAPLG00000005022	GFM1	100	79.448	Anas_platyrhynchos
ENSAOCG00000006023	gfm1	96	79.444	ENSACAG00000006829	GFM1	97	79.444	Anolis_carolinensis
ENSAOCG00000006023	gfm1	99	77.882	ENSANAG00000035983	GFM1	99	77.882	Aotus_nancymaae
ENSAOCG00000006023	gfm1	100	90.107	ENSACLG00000016586	gfm1	100	90.107	Astatotilapia_calliptera
ENSAOCG00000006023	gfm1	100	84.492	ENSAMXG00000013435	gfm1	98	85.363	Astyanax_mexicanus
ENSAOCG00000006023	gfm1	95	80.785	ENSBTAG00000027795	GFM1	95	80.785	Bos_taurus
ENSAOCG00000006023	gfm1	93	57.659	WBGene00009246	gfm-1	92	57.659	Caenorhabditis_elegans
ENSAOCG00000006023	gfm1	96	80.305	ENSCJAG00000000363	GFM1	96	80.305	Callithrix_jacchus
ENSAOCG00000006023	gfm1	97	79.835	ENSCAFG00000009006	GFM1	99	80.775	Canis_familiaris
ENSAOCG00000006023	gfm1	97	79.726	ENSCAFG00020005878	GFM1	98	81.206	Canis_lupus_dingo
ENSAOCG00000006023	gfm1	95	81.066	ENSCHIG00000015220	GFM1	95	81.066	Capra_hircus
ENSAOCG00000006023	gfm1	99	78.342	ENSTSYG00000002013	GFM1	99	78.342	Carlito_syrichta
ENSAOCG00000006023	gfm1	95	70.236	ENSCAPG00000005699	GFM1	97	70.236	Cavia_aperea
ENSAOCG00000006023	gfm1	99	77.837	ENSCPOG00000001194	GFM1	99	77.837	Cavia_porcellus
ENSAOCG00000006023	gfm1	99	77.733	ENSCCAG00000025561	GFM1	99	77.733	Cebus_capucinus
ENSAOCG00000006023	gfm1	99	78.284	ENSCATG00000037622	GFM1	99	78.284	Cercocebus_atys
ENSAOCG00000006023	gfm1	96	78.918	ENSCLAG00000002503	GFM1	95	78.918	Chinchilla_lanigera
ENSAOCG00000006023	gfm1	99	78.150	ENSCSAG00000012162	GFM1	99	78.150	Chlorocebus_sabaeus
ENSAOCG00000006023	gfm1	99	69.057	ENSCHOG00000004867	GFM1	99	69.057	Choloepus_hoffmanni
ENSAOCG00000006023	gfm1	99	79.704	ENSCPBG00000018367	GFM1	99	79.704	Chrysemys_picta_bellii
ENSAOCG00000006023	gfm1	94	58.881	ENSCING00000011960	-	93	58.881	Ciona_intestinalis
ENSAOCG00000006023	gfm1	96	59.639	ENSCSAVG00000008514	-	99	59.744	Ciona_savignyi
ENSAOCG00000006023	gfm1	97	79.178	ENSCANG00000031714	GFM1	99	78.150	Colobus_angolensis_palliatus
ENSAOCG00000006023	gfm1	99	77.882	ENSCGRG00001022095	GFM1	99	77.882	Cricetulus_griseus_chok1gshd
ENSAOCG00000006023	gfm1	99	77.882	ENSCGRG00000012043	GFM1	99	77.882	Cricetulus_griseus_crigri
ENSAOCG00000006023	gfm1	97	81.881	ENSCSEG00000017088	gfm1	99	81.881	Cynoglossus_semilaevis
ENSAOCG00000006023	gfm1	100	91.031	ENSCVAG00000004126	gfm1	100	91.031	Cyprinodon_variegatus
ENSAOCG00000006023	gfm1	100	81.150	ENSDARG00000063624	gfm1	100	81.150	Danio_rerio
ENSAOCG00000006023	gfm1	54	77.970	ENSDNOG00000016385	-	99	77.970	Dasypus_novemcinctus
ENSAOCG00000006023	gfm1	99	77.069	ENSDORG00000014165	Gfm1	97	77.069	Dipodomys_ordii
ENSAOCG00000006023	gfm1	95	67.842	FBgn0263133	mEFG1	95	67.842	Drosophila_melanogaster
ENSAOCG00000006023	gfm1	95	72.346	ENSETEG00000019197	GFM1	95	72.346	Echinops_telfairi
ENSAOCG00000006023	gfm1	90	63.353	ENSEBUG00000012794	gfm1	100	63.353	Eptatretus_burgeri
ENSAOCG00000006023	gfm1	95	59.301	ENSEEUG00000000429	GFM1	98	59.301	Erinaceus_europaeus
ENSAOCG00000006023	gfm1	100	84.225	ENSELUG00000014728	gfm1	100	84.225	Esox_lucius
ENSAOCG00000006023	gfm1	96	80.166	ENSFCAG00000013291	GFM1	99	78.238	Felis_catus
ENSAOCG00000006023	gfm1	90	79.552	ENSFALG00000007619	GFM1	99	79.552	Ficedula_albicollis
ENSAOCG00000006023	gfm1	99	78.104	ENSFDAG00000016559	GFM1	99	78.104	Fukomys_damarensis
ENSAOCG00000006023	gfm1	100	89.439	ENSFHEG00000006091	gfm1	100	89.439	Fundulus_heteroclitus
ENSAOCG00000006023	gfm1	97	85.144	ENSGMOG00000010161	gfm1	100	85.144	Gadus_morhua
ENSAOCG00000006023	gfm1	97	79.586	ENSGALG00000009634	GFM1	98	79.586	Gallus_gallus
ENSAOCG00000006023	gfm1	100	89.840	ENSGAFG00000012527	gfm1	100	89.840	Gambusia_affinis
ENSAOCG00000006023	gfm1	100	88.785	ENSGACG00000009864	gfm1	100	88.785	Gasterosteus_aculeatus
ENSAOCG00000006023	gfm1	97	79.452	ENSGGOG00000003085	GFM1	99	78.418	Gorilla_gorilla
ENSAOCG00000006023	gfm1	100	90.241	ENSHBUG00000002120	gfm1	100	90.241	Haplochromis_burtoni
ENSAOCG00000006023	gfm1	96	79.473	ENSHGLG00000016855	GFM1	99	77.303	Heterocephalus_glaber_female
ENSAOCG00000006023	gfm1	96	79.473	ENSHGLG00100013049	GFM1	99	77.303	Heterocephalus_glaber_male
ENSAOCG00000006023	gfm1	100	87.684	ENSHCOG00000007638	gfm1	99	88.750	Hippocampus_comes
ENSAOCG00000006023	gfm1	100	83.289	ENSIPUG00000005873	gfm1	100	83.289	Ictalurus_punctatus
ENSAOCG00000006023	gfm1	96	78.363	ENSSTOG00000010150	GFM1	97	78.363	Ictidomys_tridecemlineatus
ENSAOCG00000006023	gfm1	99	77.212	ENSJJAG00000016447	Gfm1	99	77.212	Jaculus_jaculus
ENSAOCG00000006023	gfm1	100	86.765	ENSKMAG00000020768	gfm1	100	86.765	Kryptolebias_marmoratus
ENSAOCG00000006023	gfm1	94	88.588	ENSLBEG00000021315	gfm1	100	88.588	Labrus_bergylta
ENSAOCG00000006023	gfm1	99	79.273	ENSLACG00000012295	GFM1	99	79.273	Latimeria_chalumnae
ENSAOCG00000006023	gfm1	97	78.237	ENSLOCG00000003778	gfm1	99	78.237	Lepisosteus_oculatus
ENSAOCG00000006023	gfm1	99	76.913	ENSLAFG00000010945	GFM1	99	77.902	Loxodonta_africana
ENSAOCG00000006023	gfm1	99	78.150	ENSMFAG00000035731	GFM1	99	78.150	Macaca_fascicularis
ENSAOCG00000006023	gfm1	99	78.150	ENSMMUG00000004961	GFM1	99	78.150	Macaca_mulatta
ENSAOCG00000006023	gfm1	99	78.150	ENSMNEG00000033245	GFM1	99	78.150	Macaca_nemestrina
ENSAOCG00000006023	gfm1	96	78.056	ENSMLEG00000030908	GFM1	99	77.959	Mandrillus_leucophaeus
ENSAOCG00000006023	gfm1	100	90.642	ENSMAMG00000011760	gfm1	100	90.642	Mastacembelus_armatus
ENSAOCG00000006023	gfm1	100	90.241	ENSMZEG00005016639	gfm1	100	90.241	Maylandia_zebra
ENSAOCG00000006023	gfm1	96	79.694	ENSMGAG00000010641	GFM1	97	79.694	Meleagris_gallopavo
ENSAOCG00000006023	gfm1	96	80.000	ENSMAUG00000000611	Gfm1	96	80.000	Mesocricetus_auratus
ENSAOCG00000006023	gfm1	96	80.444	ENSMICG00000049086	GFM1	96	80.444	Microcebus_murinus
ENSAOCG00000006023	gfm1	99	78.284	ENSMOCG00000000465	Gfm1	99	78.284	Microtus_ochrogaster
ENSAOCG00000006023	gfm1	97	87.879	ENSMMOG00000012538	gfm1	98	87.879	Mola_mola
ENSAOCG00000006023	gfm1	98	78.689	ENSMODG00000015673	GFM1	99	78.689	Monodelphis_domestica
ENSAOCG00000006023	gfm1	96	88.408	ENSMALG00000012508	gfm1	95	88.408	Monopterus_albus
ENSAOCG00000006023	gfm1	95	80.899	MGP_CAROLIEiJ_G0025052	Gfm1	94	82.200	Mus_caroli
ENSAOCG00000006023	gfm1	95	80.618	ENSMUSG00000027774	Gfm1	95	80.618	Mus_musculus
ENSAOCG00000006023	gfm1	99	77.882	MGP_PahariEiJ_G0026495	Gfm1	100	78.277	Mus_pahari
ENSAOCG00000006023	gfm1	95	80.618	MGP_SPRETEiJ_G0025994	Gfm1	94	81.800	Mus_spretus
ENSAOCG00000006023	gfm1	96	80.583	ENSMPUG00000002859	GFM1	96	80.583	Mustela_putorius_furo
ENSAOCG00000006023	gfm1	96	80.583	ENSMLUG00000000452	GFM1	96	80.583	Myotis_lucifugus
ENSAOCG00000006023	gfm1	99	77.181	ENSNGAG00000012375	Gfm1	99	77.181	Nannospalax_galili
ENSAOCG00000006023	gfm1	97	90.110	ENSNBRG00000004631	gfm1	99	90.110	Neolamprologus_brichardi
ENSAOCG00000006023	gfm1	96	80.028	ENSNLEG00000004176	GFM1	99	78.150	Nomascus_leucogenys
ENSAOCG00000006023	gfm1	91	70.882	ENSMEUG00000007784	GFM1	99	70.882	Notamacropus_eugenii
ENSAOCG00000006023	gfm1	99	77.957	ENSOPRG00000009860	GFM1	99	77.957	Ochotona_princeps
ENSAOCG00000006023	gfm1	97	79.424	ENSODEG00000004316	GFM1	99	78.104	Octodon_degus
ENSAOCG00000006023	gfm1	100	90.241	ENSONIG00000003772	gfm1	100	90.241	Oreochromis_niloticus
ENSAOCG00000006023	gfm1	97	79.698	ENSOCUG00000013561	GFM1	97	79.698	Oryctolagus_cuniculus
ENSAOCG00000006023	gfm1	95	88.983	ENSORLG00000006487	gfm1	100	88.983	Oryzias_latipes
ENSAOCG00000006023	gfm1	100	88.503	ENSORLG00020003362	gfm1	100	88.503	Oryzias_latipes_hni
ENSAOCG00000006023	gfm1	100	88.503	ENSORLG00015005829	gfm1	100	88.503	Oryzias_latipes_hsok
ENSAOCG00000006023	gfm1	100	90.107	ENSOMEG00000012894	gfm1	100	90.107	Oryzias_melastigma
ENSAOCG00000006023	gfm1	96	79.334	ENSOGAG00000008298	GFM1	96	79.334	Otolemur_garnettii
ENSAOCG00000006023	gfm1	95	80.168	ENSOARG00000002409	GFM1	98	80.168	Ovis_aries
ENSAOCG00000006023	gfm1	97	79.452	ENSPPAG00000033881	GFM1	99	78.418	Pan_paniscus
ENSAOCG00000006023	gfm1	96	80.166	ENSPPRG00000009281	GFM1	99	78.238	Panthera_pardus
ENSAOCG00000006023	gfm1	96	80.028	ENSPTIG00000012416	GFM1	99	78.104	Panthera_tigris_altaica
ENSAOCG00000006023	gfm1	97	79.452	ENSPTRG00000015570	GFM1	99	78.418	Pan_troglodytes
ENSAOCG00000006023	gfm1	99	78.150	ENSPANG00000016512	GFM1	99	78.150	Papio_anubis
ENSAOCG00000006023	gfm1	99	83.042	ENSPKIG00000004876	gfm1	99	83.042	Paramormyrops_kingsleyae
ENSAOCG00000006023	gfm1	100	79.973	ENSPSIG00000012567	GFM1	99	79.973	Pelodiscus_sinensis
ENSAOCG00000006023	gfm1	97	85.379	ENSPMGG00000014068	gfm1	100	85.379	Periophthalmus_magnuspinnatus
ENSAOCG00000006023	gfm1	99	77.480	ENSPEMG00000008942	Gfm1	99	77.480	Peromyscus_maniculatus_bairdii
ENSAOCG00000006023	gfm1	86	76.434	ENSPCIG00000020195	GFM1	96	78.827	Phascolarctos_cinereus
ENSAOCG00000006023	gfm1	100	89.706	ENSPFOG00000011022	gfm1	100	89.706	Poecilia_formosa
ENSAOCG00000006023	gfm1	97	90.055	ENSPLAG00000019585	gfm1	100	89.326	Poecilia_latipinna
ENSAOCG00000006023	gfm1	100	89.572	ENSPMEG00000012376	gfm1	100	89.572	Poecilia_mexicana
ENSAOCG00000006023	gfm1	100	89.840	ENSPREG00000001332	gfm1	95	89.840	Poecilia_reticulata
ENSAOCG00000006023	gfm1	97	78.904	ENSPPYG00000014244	GFM1	99	77.882	Pongo_abelii
ENSAOCG00000006023	gfm1	94	78.378	ENSPCAG00000008934	GFM1	100	78.378	Procavia_capensis
ENSAOCG00000006023	gfm1	97	79.150	ENSPCOG00000022259	GFM1	99	77.704	Propithecus_coquereli
ENSAOCG00000006023	gfm1	96	78.918	ENSPVAG00000013605	GFM1	96	78.918	Pteropus_vampyrus
ENSAOCG00000006023	gfm1	100	89.973	ENSPNYG00000006037	gfm1	100	89.973	Pundamilia_nyererei
ENSAOCG00000006023	gfm1	100	83.690	ENSPNAG00000001237	gfm1	100	83.690	Pygocentrus_nattereri
ENSAOCG00000006023	gfm1	96	79.861	ENSRNOG00000012873	Gfm1	96	79.861	Rattus_norvegicus
ENSAOCG00000006023	gfm1	97	79.041	ENSRBIG00000031363	GFM1	99	78.016	Rhinopithecus_bieti
ENSAOCG00000006023	gfm1	97	79.178	ENSRROG00000031081	GFM1	99	78.150	Rhinopithecus_roxellana
ENSAOCG00000006023	gfm1	92	57.019	YLR069C	-	90	57.019	Saccharomyces_cerevisiae
ENSAOCG00000006023	gfm1	99	78.016	ENSSBOG00000023252	GFM1	99	78.016	Saimiri_boliviensis_boliviensis
ENSAOCG00000006023	gfm1	96	80.641	ENSSHAG00000017772	GFM1	96	80.641	Sarcophilus_harrisii
ENSAOCG00000006023	gfm1	99	82.796	ENSSFOG00015003117	gfm1	99	83.148	Scleropages_formosus
ENSAOCG00000006023	gfm1	100	89.973	ENSSMAG00000013221	gfm1	100	89.973	Scophthalmus_maximus
ENSAOCG00000006023	gfm1	100	90.508	ENSSDUG00000018665	gfm1	100	90.508	Seriola_dumerili
ENSAOCG00000006023	gfm1	100	90.374	ENSSLDG00000020606	gfm1	100	90.374	Seriola_lalandi_dorsalis
ENSAOCG00000006023	gfm1	98	76.975	ENSSPUG00000018686	GFM1	99	76.975	Sphenodon_punctatus
ENSAOCG00000006023	gfm1	100	92.513	ENSSPAG00000008800	gfm1	100	92.513	Stegastes_partitus
ENSAOCG00000006023	gfm1	95	79.944	ENSSSCG00000025651	GFM1	95	79.944	Sus_scrofa
ENSAOCG00000006023	gfm1	100	87.166	ENSTRUG00000009244	gfm1	100	87.166	Takifugu_rubripes
ENSAOCG00000006023	gfm1	100	87.834	ENSTNIG00000007729	gfm1	100	87.834	Tetraodon_nigroviridis
ENSAOCG00000006023	gfm1	89	71.493	ENSTBEG00000017404	GFM1	89	71.493	Tupaia_belangeri
ENSAOCG00000006023	gfm1	95	80.505	ENSTTRG00000001735	GFM1	94	80.505	Tursiops_truncatus
ENSAOCG00000006023	gfm1	96	80.305	ENSUAMG00000026381	GFM1	96	80.305	Ursus_americanus
ENSAOCG00000006023	gfm1	96	80.305	ENSUMAG00000011268	GFM1	96	80.305	Ursus_maritimus
ENSAOCG00000006023	gfm1	96	76.667	ENSVPAG00000009444	GFM1	96	76.667	Vicugna_pacos
ENSAOCG00000006023	gfm1	97	79.642	ENSVVUG00000020091	GFM1	99	80.477	Vulpes_vulpes
ENSAOCG00000006023	gfm1	99	80.589	ENSXETG00000032551	GFM1	99	80.589	Xenopus_tropicalis
ENSAOCG00000006023	gfm1	54	88.089	ENSXCOG00000012590	gfm1	93	88.089	Xiphophorus_couchianus
ENSAOCG00000006023	gfm1	100	89.305	ENSXMAG00000000261	gfm1	100	89.305	Xiphophorus_maculatus