EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000006229 (Gene tree)
Gene ID: 111580011
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 9151 bases
Position: chrNXFZ01003518.1:307615-316765
Accession: 111580011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000021438	MA3	PF02847.17	4.7e-22	1	1
ENSAOCP00000003021	MA3	PF02847.17	5.7e-22	1	1
ENSAOCP00000021438	MIF4G	PF02854.19	5.8e-20	1	1
ENSAOCP00000003021	MIF4G	PF02854.19	6.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000010493	-	3790	XM_023287564	ENSAOCP00000003021	846 (aa)	XP_023143332	UPI000C31B250
ENSAOCT00000010506	-	3394	-	ENSAOCP00000021438	793 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000006229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006229	nom1	98	54.035	ENSG00000146909	NOM1	60	69.231	Homo_sapiens
ENSAOCG00000006229	nom1	64	96.846	ENSAPOG00000012073	nom1	100	92.706	Acanthochromis_polyacanthus
ENSAOCG00000006229	nom1	82	57.082	ENSAMEG00000001412	NOM1	97	55.556	Ailuropoda_melanoleuca
ENSAOCG00000006229	nom1	88	91.603	ENSACIG00000018050	nom1	98	91.603	Amphilophus_citrinellus
ENSAOCG00000006229	nom1	100	98.463	ENSAPEG00000015994	nom1	100	98.463	Amphiprion_percula
ENSAOCG00000006229	nom1	100	76.325	ENSATEG00000005405	nom1	65	88.534	Anabas_testudineus
ENSAOCG00000006229	nom1	79	57.333	ENSAPLG00000006585	NOM1	80	66.098	Anas_platyrhynchos
ENSAOCG00000006229	nom1	80	56.914	ENSACAG00000011192	NOM1	64	64.168	Anolis_carolinensis
ENSAOCG00000006229	nom1	100	77.453	ENSACLG00000000033	nom1	64	89.700	Astatotilapia_calliptera
ENSAOCG00000006229	nom1	63	74.721	ENSAMXG00000041486	nom1	62	74.721	Astyanax_mexicanus
ENSAOCG00000006229	nom1	97	51.768	ENSBTAG00000016435	NOM1	62	64.773	Bos_taurus
ENSAOCG00000006229	nom1	98	54.157	ENSCJAG00000004336	NOM1	61	68.130	Callithrix_jacchus
ENSAOCG00000006229	nom1	82	57.062	ENSCAFG00020005121	NOM1	61	65.038	Canis_lupus_dingo
ENSAOCG00000006229	nom1	82	56.472	ENSCHIG00000020102	NOM1	62	65.067	Capra_hircus
ENSAOCG00000006229	nom1	98	54.191	ENSTSYG00000000227	NOM1	62	68.654	Carlito_syrichta
ENSAOCG00000006229	nom1	61	68.330	ENSCAPG00000016273	NOM1	99	68.330	Cavia_aperea
ENSAOCG00000006229	nom1	98	51.769	ENSCPOG00000025538	NOM1	61	63.208	Cavia_porcellus
ENSAOCG00000006229	nom1	90	68.075	ENSCCAG00000014944	NOM1	99	67.797	Cebus_capucinus
ENSAOCG00000006229	nom1	82	57.041	ENSCLAG00000000267	NOM1	63	64.916	Chinchilla_lanigera
ENSAOCG00000006229	nom1	68	67.871	ENSCPBG00000018215	NOM1	72	67.871	Chrysemys_picta_bellii
ENSAOCG00000006229	nom1	61	40.385	ENSCING00000005248	-	70	40.267	Ciona_intestinalis
ENSAOCG00000006229	nom1	63	67.041	ENSCANG00000041984	NOM1	91	67.041	Colobus_angolensis_palliatus
ENSAOCG00000006229	nom1	61	67.437	ENSCGRG00000005405	Nom1	97	67.437	Cricetulus_griseus_crigri
ENSAOCG00000006229	nom1	98	70.077	ENSCSEG00000000932	nom1	61	82.435	Cynoglossus_semilaevis
ENSAOCG00000006229	nom1	98	72.255	ENSCVAG00000007562	nom1	64	86.654	Cyprinodon_variegatus
ENSAOCG00000006229	nom1	100	63.573	ENSDARG00000060027	nom1	100	76.591	Danio_rerio
ENSAOCG00000006229	nom1	67	58.182	ENSDORG00000015682	Nom1	78	56.957	Dipodomys_ordii
ENSAOCG00000006229	nom1	59	38.430	FBgn0035336	CG9004	59	38.207	Drosophila_melanogaster
ENSAOCG00000006229	nom1	74	55.924	ENSETEG00000003104	NOM1	77	55.924	Echinops_telfairi
ENSAOCG00000006229	nom1	51	50.342	ENSEBUG00000010077	nom1	96	50.342	Eptatretus_burgeri
ENSAOCG00000006229	nom1	65	65.880	ENSEASG00005001489	NOM1	62	67.614	Equus_asinus_asinus
ENSAOCG00000006229	nom1	65	65.766	ENSECAG00000007596	NOM1	57	67.424	Equus_caballus
ENSAOCG00000006229	nom1	65	79.455	ENSELUG00000006266	nom1	64	80.185	Esox_lucius
ENSAOCG00000006229	nom1	98	52.432	ENSFCAG00000006467	NOM1	64	65.981	Felis_catus
ENSAOCG00000006229	nom1	82	57.429	ENSFALG00000006904	NOM1	77	66.791	Ficedula_albicollis
ENSAOCG00000006229	nom1	99	51.220	ENSFDAG00000016241	NOM1	64	64.906	Fukomys_damarensis
ENSAOCG00000006229	nom1	98	72.967	ENSFHEG00000015974	nom1	64	84.557	Fundulus_heteroclitus
ENSAOCG00000006229	nom1	94	62.857	ENSGMOG00000005129	nom1	67	74.761	Gadus_morhua
ENSAOCG00000006229	nom1	88	55.053	ENSGALG00000006437	NOM1	61	66.920	Gallus_gallus
ENSAOCG00000006229	nom1	98	73.460	ENSGAFG00000003211	nom1	64	86.116	Gambusia_affinis
ENSAOCG00000006229	nom1	83	57.865	ENSGAGG00000014347	NOM1	64	67.681	Gopherus_agassizii
ENSAOCG00000006229	nom1	65	65.530	ENSGGOG00000010920	NOM1	56	68.654	Gorilla_gorilla
ENSAOCG00000006229	nom1	100	76.279	ENSHBUG00000014616	nom1	64	89.700	Haplochromis_burtoni
ENSAOCG00000006229	nom1	98	53.909	ENSHGLG00000007392	NOM1	62	66.792	Heterocephalus_glaber_female
ENSAOCG00000006229	nom1	87	69.380	ENSHGLG00100014407	NOM1	62	66.792	Heterocephalus_glaber_male
ENSAOCG00000006229	nom1	62	72.348	ENSIPUG00000013980	nom1	63	72.212	Ictalurus_punctatus
ENSAOCG00000006229	nom1	63	67.355	ENSSTOG00000031736	NOM1	93	67.355	Ictidomys_tridecemlineatus
ENSAOCG00000006229	nom1	58	68.789	ENSJJAG00000011716	Nom1	98	68.789	Jaculus_jaculus
ENSAOCG00000006229	nom1	98	74.622	ENSLBEG00000009252	nom1	98	75.467	Labrus_bergylta
ENSAOCG00000006229	nom1	84	61.657	ENSLACG00000011777	NOM1	64	68.480	Latimeria_chalumnae
ENSAOCG00000006229	nom1	98	61.105	ENSLOCG00000012452	nom1	66	75.235	Lepisosteus_oculatus
ENSAOCG00000006229	nom1	98	47.642	ENSLAFG00000007119	NOM1	94	60.223	Loxodonta_africana
ENSAOCG00000006229	nom1	97	52.613	ENSMMUG00000039033	NOM1	59	65.326	Macaca_mulatta
ENSAOCG00000006229	nom1	61	68.582	ENSMLEG00000037062	NOM1	98	68.582	Mandrillus_leucophaeus
ENSAOCG00000006229	nom1	100	77.700	ENSMAMG00000004118	nom1	100	76.995	Mastacembelus_armatus
ENSAOCG00000006229	nom1	100	77.220	ENSMZEG00005000384	nom1	64	89.513	Maylandia_zebra
ENSAOCG00000006229	nom1	62	66.288	ENSMGAG00000005051	NOM1	77	66.288	Meleagris_gallopavo
ENSAOCG00000006229	nom1	65	64.727	ENSMAUG00000017988	Nom1	64	66.353	Mesocricetus_auratus
ENSAOCG00000006229	nom1	97	51.852	ENSMICG00000017531	NOM1	63	65.666	Microcebus_murinus
ENSAOCG00000006229	nom1	68	62.912	ENSMOCG00000015962	Nom1	62	67.433	Microtus_ochrogaster
ENSAOCG00000006229	nom1	99	72.980	ENSMMOG00000004419	nom1	65	80.367	Mola_mola
ENSAOCG00000006229	nom1	66	66.607	ENSMODG00000005177	NOM1	62	70.152	Monodelphis_domestica
ENSAOCG00000006229	nom1	97	75.032	ENSMALG00000008800	nom1	99	75.434	Monopterus_albus
ENSAOCG00000006229	nom1	97	52.990	MGP_CAROLIEiJ_G0027043	Nom1	61	66.089	Mus_caroli
ENSAOCG00000006229	nom1	97	52.927	ENSMUSG00000001569	Nom1	61	66.089	Mus_musculus
ENSAOCG00000006229	nom1	97	52.751	MGP_SPRETEiJ_G0028039	Nom1	61	66.089	Mus_spretus
ENSAOCG00000006229	nom1	82	54.043	ENSMPUG00000009745	NOM1	77	62.218	Mustela_putorius_furo
ENSAOCG00000006229	nom1	70	62.771	ENSMLUG00000009129	NOM1	88	67.105	Myotis_lucifugus
ENSAOCG00000006229	nom1	100	77.156	ENSNBRG00000016429	nom1	95	89.981	Neolamprologus_brichardi
ENSAOCG00000006229	nom1	98	53.436	ENSNLEG00000000238	NOM1	60	67.050	Nomascus_leucogenys
ENSAOCG00000006229	nom1	70	55.220	ENSMEUG00000001108	NOM1	52	73.438	Notamacropus_eugenii
ENSAOCG00000006229	nom1	52	56.393	ENSOPRG00000014676	NOM1	52	56.026	Ochotona_princeps
ENSAOCG00000006229	nom1	82	56.899	ENSODEG00000009399	NOM1	76	63.790	Octodon_degus
ENSAOCG00000006229	nom1	94	78.040	ENSONIG00000005958	nom1	68	90.262	Oreochromis_niloticus
ENSAOCG00000006229	nom1	55	67.527	ENSOANG00000006139	-	97	67.312	Ornithorhynchus_anatinus
ENSAOCG00000006229	nom1	89	53.877	ENSOCUG00000021448	-	90	52.602	Oryctolagus_cuniculus
ENSAOCG00000006229	nom1	98	54.279	ENSOCUG00000004071	-	63	67.103	Oryctolagus_cuniculus
ENSAOCG00000006229	nom1	100	75.235	ENSORLG00000010541	nom1	64	85.366	Oryzias_latipes
ENSAOCG00000006229	nom1	93	74.275	ENSORLG00020010789	nom1	69	85.366	Oryzias_latipes_hni
ENSAOCG00000006229	nom1	100	73.918	ENSORLG00015010475	nom1	69	85.178	Oryzias_latipes_hsok
ENSAOCG00000006229	nom1	100	75.615	ENSOMEG00000004219	nom1	100	75.967	Oryzias_melastigma
ENSAOCG00000006229	nom1	68	63.993	ENSOGAG00000001124	NOM1	87	67.797	Otolemur_garnettii
ENSAOCG00000006229	nom1	82	56.330	ENSOARG00000007261	NOM1	70	65.067	Ovis_aries
ENSAOCG00000006229	nom1	97	54.265	ENSPPAG00000041374	NOM1	60	69.038	Pan_paniscus
ENSAOCG00000006229	nom1	82	57.567	ENSPTIG00000013532	NOM1	73	65.672	Panthera_tigris_altaica
ENSAOCG00000006229	nom1	98	54.000	ENSPTRG00000019917	NOM1	60	69.038	Pan_troglodytes
ENSAOCG00000006229	nom1	98	55.136	ENSPANG00000007605	NOM1	60	69.038	Papio_anubis
ENSAOCG00000006229	nom1	100	60.164	ENSPKIG00000005825	nom1	64	70.841	Paramormyrops_kingsleyae
ENSAOCG00000006229	nom1	63	67.161	ENSPSIG00000017848	NOM1	89	67.161	Pelodiscus_sinensis
ENSAOCG00000006229	nom1	100	72.855	ENSPMGG00000002577	nom1	66	86.168	Periophthalmus_magnuspinnatus
ENSAOCG00000006229	nom1	97	53.747	ENSPEMG00000024180	Nom1	60	68.593	Peromyscus_maniculatus_bairdii
ENSAOCG00000006229	nom1	99	52.680	ENSPCIG00000027941	NOM1	59	67.797	Phascolarctos_cinereus
ENSAOCG00000006229	nom1	99	73.653	ENSPFOG00000015771	nom1	99	74.140	Poecilia_formosa
ENSAOCG00000006229	nom1	63	86.867	ENSPLAG00000007856	nom1	99	72.652	Poecilia_latipinna
ENSAOCG00000006229	nom1	99	74.356	ENSPMEG00000014155	nom1	99	74.140	Poecilia_mexicana
ENSAOCG00000006229	nom1	98	73.191	ENSPREG00000008850	nom1	98	72.835	Poecilia_reticulata
ENSAOCG00000006229	nom1	98	49.883	ENSPPYG00000018222	NOM1	59	62.692	Pongo_abelii
ENSAOCG00000006229	nom1	77	62.093	ENSPCAG00000000440	NOM1	83	62.093	Procavia_capensis
ENSAOCG00000006229	nom1	61	66.603	ENSPCOG00000015222	NOM1	98	66.603	Propithecus_coquereli
ENSAOCG00000006229	nom1	97	52.844	ENSPVAG00000014760	NOM1	63	65.000	Pteropus_vampyrus
ENSAOCG00000006229	nom1	100	77.103	ENSPNYG00000006975	nom1	96	88.910	Pundamilia_nyererei
ENSAOCG00000006229	nom1	66	71.964	ENSPNAG00000011085	nom1	60	74.812	Pygocentrus_nattereri
ENSAOCG00000006229	nom1	97	49.471	ENSRNOG00000048969	AABR07059041.1	64	63.006	Rattus_norvegicus
ENSAOCG00000006229	nom1	98	54.965	ENSRBIG00000037042	NOM1	60	68.846	Rhinopithecus_bieti
ENSAOCG00000006229	nom1	98	54.728	ENSRROG00000037293	NOM1	60	68.462	Rhinopithecus_roxellana
ENSAOCG00000006229	nom1	65	66.908	ENSSHAG00000017998	-	77	69.011	Sarcophilus_harrisii
ENSAOCG00000006229	nom1	52	62.470	ENSSHAG00000002835	-	99	62.470	Sarcophilus_harrisii
ENSAOCG00000006229	nom1	57	73.045	ENSSFOG00015003196	nom1	100	73.045	Scleropages_formosus
ENSAOCG00000006229	nom1	100	77.921	ENSSMAG00000011047	nom1	64	88.662	Scophthalmus_maximus
ENSAOCG00000006229	nom1	98	80.691	ENSSDUG00000006834	nom1	64	90.892	Seriola_dumerili
ENSAOCG00000006229	nom1	98	79.380	ENSSLDG00000021812	nom1	98	79.359	Seriola_lalandi_dorsalis
ENSAOCG00000006229	nom1	85	48.123	ENSSPUG00000002556	NOM1	90	68.571	Sphenodon_punctatus
ENSAOCG00000006229	nom1	98	86.572	ENSSPAG00000000953	nom1	98	85.277	Stegastes_partitus
ENSAOCG00000006229	nom1	82	57.082	ENSTGUG00000000702	-	75	67.110	Taeniopygia_guttata
ENSAOCG00000006229	nom1	66	80.824	ENSTRUG00000010239	nom1	64	82.959	Takifugu_rubripes
ENSAOCG00000006229	nom1	98	69.203	ENSTNIG00000012783	nom1	100	67.778	Tetraodon_nigroviridis
ENSAOCG00000006229	nom1	95	51.632	ENSTTRG00000009691	NOM1	62	66.603	Tursiops_truncatus
ENSAOCG00000006229	nom1	98	52.179	ENSUAMG00000025450	NOM1	61	65.283	Ursus_americanus
ENSAOCG00000006229	nom1	86	56.739	ENSUMAG00000014275	NOM1	71	64.540	Ursus_maritimus
ENSAOCG00000006229	nom1	75	67.123	ENSVVUG00000002608	NOM1	62	65.169	Vulpes_vulpes
ENSAOCG00000006229	nom1	91	56.274	ENSXETG00000021611	nom1	82	77.073	Xenopus_tropicalis
ENSAOCG00000006229	nom1	98	74.614	ENSXMAG00000002451	nom1	98	73.428	Xiphophorus_maculatus