EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000006308 (Gene tree)
Gene ID: 111564945
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 13950 bases
Position: chrNXFZ01006364.1:414476-428425
Accession: 111564945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003043	RRM_5	PF13893.6	1.7e-06	1	1
ENSAOCP00000021448	RRM_5	PF13893.6	2.7e-06	1	1
ENSAOCP00000021448	RRM_1	PF00076.22	5.7e-14	1	1
ENSAOCP00000003043	RRM_1	PF00076.22	6e-14	1	1
ENSAOCP00000021448	SAP	PF02037.27	2.7e-09	1	1
ENSAOCP00000003043	SAP	PF02037.27	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000010486	-	2232	-	ENSAOCP00000021448	743 (aa)	-	-
ENSAOCT00000010461	-	3435	XM_023264834	ENSAOCP00000003043	783 (aa)	XP_023120602	-

Gene Model

Click here to download ENSAOCG00000006308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000006308	safb	75	39.825	ENSAOCG00000002747	sltm	53	47.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006308	safb	71	42.834	ENSG00000160633	SAFB	95	47.802	Homo_sapiens
ENSAOCG00000006308	safb	100	96.679	ENSAPOG00000022508	safb	95	96.679	Acanthochromis_polyacanthus
ENSAOCG00000006308	safb	71	43.556	ENSAMEG00000012254	SAFB	93	43.367	Ailuropoda_melanoleuca
ENSAOCG00000006308	safb	98	76.117	ENSACIG00000006247	safb	100	75.734	Amphilophus_citrinellus
ENSAOCG00000006308	safb	100	99.617	ENSAPEG00000023342	safb	95	99.617	Amphiprion_percula
ENSAOCG00000006308	safb	99	84.818	ENSATEG00000004998	safb	95	85.194	Anabas_testudineus
ENSAOCG00000006308	safb	93	43.140	ENSAPLG00000005780	-	94	45.683	Anas_platyrhynchos
ENSAOCG00000006308	safb	62	46.055	ENSAPLG00000006355	-	96	50.185	Anas_platyrhynchos
ENSAOCG00000006308	safb	52	56.044	ENSACAG00000016893	-	96	45.503	Anolis_carolinensis
ENSAOCG00000006308	safb	71	43.915	ENSANAG00000028821	SAFB	92	44.563	Aotus_nancymaae
ENSAOCG00000006308	safb	99	78.382	ENSACLG00000001926	safb	100	74.786	Astatotilapia_calliptera
ENSAOCG00000006308	safb	99	63.703	ENSAMXG00000018154	safb	100	59.701	Astyanax_mexicanus
ENSAOCG00000006308	safb	98	43.721	ENSBTAG00000007875	SAFB	93	43.001	Bos_taurus
ENSAOCG00000006308	safb	71	43.577	ENSCAFG00000018803	SAFB	80	43.701	Canis_familiaris
ENSAOCG00000006308	safb	71	43.577	ENSCAFG00020018943	SAFB	92	43.938	Canis_lupus_dingo
ENSAOCG00000006308	safb	98	44.191	ENSCHIG00000007262	SAFB	93	43.464	Capra_hircus
ENSAOCG00000006308	safb	57	47.107	ENSTSYG00000001851	-	88	45.000	Carlito_syrichta
ENSAOCG00000006308	safb	71	43.922	ENSCCAG00000020193	SAFB	92	44.457	Cebus_capucinus
ENSAOCG00000006308	safb	71	42.516	ENSCATG00000029994	SAFB	92	44.222	Cercocebus_atys
ENSAOCG00000006308	safb	71	42.516	ENSCSAG00000009949	SAFB	92	44.036	Chlorocebus_sabaeus
ENSAOCG00000006308	safb	63	33.099	ENSCHOG00000003208	SAFB	87	39.021	Choloepus_hoffmanni
ENSAOCG00000006308	safb	92	43.149	ENSCPBG00000010928	-	93	44.970	Chrysemys_picta_bellii
ENSAOCG00000006308	safb	90	45.154	ENSCPBG00000010936	-	94	45.927	Chrysemys_picta_bellii
ENSAOCG00000006308	safb	97	43.632	ENSCANG00000019754	-	90	44.565	Colobus_angolensis_palliatus
ENSAOCG00000006308	safb	98	38.471	ENSCANG00000004774	-	91	43.060	Colobus_angolensis_palliatus
ENSAOCG00000006308	safb	67	42.215	ENSCGRG00001002254	Safb	93	43.440	Cricetulus_griseus_chok1gshd
ENSAOCG00000006308	safb	91	87.912	ENSCSEG00000019870	safb	100	74.802	Cynoglossus_semilaevis
ENSAOCG00000006308	safb	100	63.808	ENSCVAG00000002226	safb	100	62.500	Cyprinodon_variegatus
ENSAOCG00000006308	safb	97	62.252	ENSDARG00000020467	safb	98	58.528	Danio_rerio
ENSAOCG00000006308	safb	71	43.248	ENSDNOG00000015746	SAFB	95	42.424	Dasypus_novemcinctus
ENSAOCG00000006308	safb	53	62.085	ENSETEG00000018679	SAFB	63	52.574	Echinops_telfairi
ENSAOCG00000006308	safb	68	43.719	ENSEASG00005023019	SAFB	93	43.645	Equus_asinus_asinus
ENSAOCG00000006308	safb	67	43.406	ENSECAG00000018659	SAFB	81	45.970	Equus_caballus
ENSAOCG00000006308	safb	99	64.217	ENSELUG00000022327	safb	99	64.087	Esox_lucius
ENSAOCG00000006308	safb	71	43.248	ENSFCAG00000011835	SAFB	92	43.708	Felis_catus
ENSAOCG00000006308	safb	98	43.883	ENSFALG00000013882	-	87	45.219	Ficedula_albicollis
ENSAOCG00000006308	safb	77	57.463	ENSFDAG00000020306	SAFB	74	43.230	Fukomys_damarensis
ENSAOCG00000006308	safb	100	67.298	ENSFHEG00000004219	safb	100	66.007	Fundulus_heteroclitus
ENSAOCG00000006308	safb	99	66.253	ENSGMOG00000014280	safb	95	67.244	Gadus_morhua
ENSAOCG00000006308	safb	67	43.492	ENSGALG00000001948	-	93	47.271	Gallus_gallus
ENSAOCG00000006308	safb	99	44.643	ENSGALG00000013365	-	97	45.039	Gallus_gallus
ENSAOCG00000006308	safb	100	65.133	ENSGAFG00000016162	safb	100	63.496	Gambusia_affinis
ENSAOCG00000006308	safb	99	74.939	ENSGACG00000011385	safb	95	75.303	Gasterosteus_aculeatus
ENSAOCG00000006308	safb	65	51.899	ENSGAGG00000017702	-	82	55.311	Gopherus_agassizii
ENSAOCG00000006308	safb	99	47.546	ENSGAGG00000008424	-	98	48.366	Gopherus_agassizii
ENSAOCG00000006308	safb	71	42.994	ENSGGOG00000015109	SAFB	92	44.458	Gorilla_gorilla
ENSAOCG00000006308	safb	100	73.880	ENSHBUG00000009218	safb	100	75.160	Haplochromis_burtoni
ENSAOCG00000006308	safb	77	57.463	ENSHGLG00100004228	SAFB	87	40.594	Heterocephalus_glaber_male
ENSAOCG00000006308	safb	92	66.166	ENSHCOG00000001705	safb	95	67.026	Hippocampus_comes
ENSAOCG00000006308	safb	98	63.052	ENSIPUG00000024869	safb2	95	62.654	Ictalurus_punctatus
ENSAOCG00000006308	safb	67	41.876	ENSJJAG00000009021	Safb	93	43.564	Jaculus_jaculus
ENSAOCG00000006308	safb	99	79.082	ENSKMAG00000022308	safb	95	79.445	Kryptolebias_marmoratus
ENSAOCG00000006308	safb	100	80.149	ENSLBEG00000006015	safb	95	80.025	Labrus_bergylta
ENSAOCG00000006308	safb	69	45.156	ENSLACG00000018090	SAFB	97	47.743	Latimeria_chalumnae
ENSAOCG00000006308	safb	98	62.255	ENSLOCG00000003613	safb	99	60.165	Lepisosteus_oculatus
ENSAOCG00000006308	safb	98	43.701	ENSLAFG00000003840	SAFB	93	44.395	Loxodonta_africana
ENSAOCG00000006308	safb	71	42.289	ENSMFAG00000003885	SAFB	92	44.222	Macaca_fascicularis
ENSAOCG00000006308	safb	71	43.279	ENSMMUG00000017970	SAFB	92	44.344	Macaca_mulatta
ENSAOCG00000006308	safb	71	40.488	ENSMNEG00000035637	SAFB	91	45.030	Macaca_nemestrina
ENSAOCG00000006308	safb	69	39.344	ENSMLEG00000038637	SAFB	92	42.906	Mandrillus_leucophaeus
ENSAOCG00000006308	safb	100	84.731	ENSMAMG00000003357	safb	87	84.731	Mastacembelus_armatus
ENSAOCG00000006308	safb	99	82.368	ENSMZEG00005009120	safb	95	82.397	Maylandia_zebra
ENSAOCG00000006308	safb	52	60.465	ENSMGAG00000001051	-	96	48.379	Meleagris_gallopavo
ENSAOCG00000006308	safb	98	41.869	ENSMGAG00000001101	-	98	44.255	Meleagris_gallopavo
ENSAOCG00000006308	safb	71	43.631	ENSMICG00000008739	-	92	45.103	Microcebus_murinus
ENSAOCG00000006308	safb	90	38.298	ENSMICG00000046795	-	70	66.197	Microcebus_murinus
ENSAOCG00000006308	safb	67	41.335	ENSMOCG00000014040	Safb	50	53.165	Microtus_ochrogaster
ENSAOCG00000006308	safb	98	44.027	ENSMODG00000001236	SAFB	91	44.240	Monodelphis_domestica
ENSAOCG00000006308	safb	100	82.302	ENSMALG00000020330	safb	100	82.302	Monopterus_albus
ENSAOCG00000006308	safb	67	41.111	MGP_CAROLIEiJ_G0021780	Safb	93	43.107	Mus_caroli
ENSAOCG00000006308	safb	67	40.952	ENSMUSG00000071054	Safb	93	42.686	Mus_musculus
ENSAOCG00000006308	safb	66	40.510	MGP_PahariEiJ_G0020769	Safb	93	42.358	Mus_pahari
ENSAOCG00000006308	safb	98	43.894	ENSMLUG00000001081	SAFB	90	44.037	Myotis_lucifugus
ENSAOCG00000006308	safb	67	42.834	ENSNGAG00000019882	Safb	93	43.473	Nannospalax_galili
ENSAOCG00000006308	safb	71	42.782	ENSNLEG00000013551	SAFB	97	44.157	Nomascus_leucogenys
ENSAOCG00000006308	safb	57	56.044	ENSODEG00000014838	SAFB	93	44.260	Octodon_degus
ENSAOCG00000006308	safb	99	82.219	ENSONIG00000002318	safb	95	81.920	Oreochromis_niloticus
ENSAOCG00000006308	safb	89	39.387	ENSOCUG00000014628	SAFB	94	38.896	Oryctolagus_cuniculus
ENSAOCG00000006308	safb	99	76.628	ENSORLG00000016989	safb	95	77.020	Oryzias_latipes
ENSAOCG00000006308	safb	98	71.673	ENSORLG00020000404	safb	100	71.447	Oryzias_latipes_hni
ENSAOCG00000006308	safb	100	76.894	ENSORLG00015010733	safb	95	77.146	Oryzias_latipes_hsok
ENSAOCG00000006308	safb	99	76.628	ENSOMEG00000009066	safb	95	77.020	Oryzias_melastigma
ENSAOCG00000006308	safb	68	44.799	ENSOGAG00000027769	SAFB	92	44.683	Otolemur_garnettii
ENSAOCG00000006308	safb	98	41.067	ENSOARG00000007662	-	93	39.798	Ovis_aries
ENSAOCG00000006308	safb	51	47.477	ENSOARG00000007856	-	100	39.221	Ovis_aries
ENSAOCG00000006308	safb	71	42.626	ENSPPAG00000035129	SAFB	92	44.222	Pan_paniscus
ENSAOCG00000006308	safb	71	43.248	ENSPPRG00000017197	SAFB	92	43.708	Panthera_pardus
ENSAOCG00000006308	safb	71	42.609	ENSPTRG00000010335	SAFB	92	44.222	Pan_troglodytes
ENSAOCG00000006308	safb	71	41.971	ENSPANG00000007770	SAFB	92	44.222	Papio_anubis
ENSAOCG00000006308	safb	99	63.735	ENSPKIG00000009902	safb	95	64.362	Paramormyrops_kingsleyae
ENSAOCG00000006308	safb	98	46.765	ENSPSIG00000009367	-	91	46.652	Pelodiscus_sinensis
ENSAOCG00000006308	safb	99	47.124	ENSPSIG00000011679	-	95	48.775	Pelodiscus_sinensis
ENSAOCG00000006308	safb	100	68.170	ENSPFOG00000007745	safb	100	66.626	Poecilia_formosa
ENSAOCG00000006308	safb	100	64.826	ENSPLAG00000001614	safb	100	63.807	Poecilia_latipinna
ENSAOCG00000006308	safb	100	67.794	ENSPMEG00000021023	safb	100	68.125	Poecilia_mexicana
ENSAOCG00000006308	safb	100	65.968	ENSPREG00000012496	safb	100	65.018	Poecilia_reticulata
ENSAOCG00000006308	safb	71	42.834	ENSPPYG00000009428	SAFB	92	44.022	Pongo_abelii
ENSAOCG00000006308	safb	92	39.010	ENSPCAG00000006475	SAFB	92	41.779	Procavia_capensis
ENSAOCG00000006308	safb	98	41.238	ENSPCOG00000014090	SAFB	92	41.259	Propithecus_coquereli
ENSAOCG00000006308	safb	73	57.273	ENSPVAG00000004913	SAFB	67	56.364	Pteropus_vampyrus
ENSAOCG00000006308	safb	99	63.942	ENSPNAG00000021838	safb	99	60.117	Pygocentrus_nattereri
ENSAOCG00000006308	safb	57	57.724	ENSRNOG00000050543	Safb	96	40.569	Rattus_norvegicus
ENSAOCG00000006308	safb	71	44.271	ENSRBIG00000042509	SAFB	92	44.915	Rhinopithecus_bieti
ENSAOCG00000006308	safb	71	42.607	ENSRROG00000029278	SAFB	92	44.340	Rhinopithecus_roxellana
ENSAOCG00000006308	safb	71	43.949	ENSSBOG00000026291	SAFB	92	44.544	Saimiri_boliviensis_boliviensis
ENSAOCG00000006308	safb	99	62.635	ENSSFOG00015008156	safb	95	63.114	Scleropages_formosus
ENSAOCG00000006308	safb	99	83.019	ENSSMAG00000009316	safb	95	83.019	Scophthalmus_maximus
ENSAOCG00000006308	safb	100	81.234	ENSSDUG00000009652	safb	100	80.510	Seriola_dumerili
ENSAOCG00000006308	safb	100	87.657	ENSSLDG00000001670	safb	95	87.657	Seriola_lalandi_dorsalis
ENSAOCG00000006308	safb	63	42.391	ENSSARG00000010475	SAFB	93	41.860	Sorex_araneus
ENSAOCG00000006308	safb	59	43.133	ENSSPUG00000009747	-	97	43.386	Sphenodon_punctatus
ENSAOCG00000006308	safb	53	43.893	ENSSPUG00000009820	-	94	48.271	Sphenodon_punctatus
ENSAOCG00000006308	safb	100	81.795	ENSSPAG00000015682	safb	100	81.946	Stegastes_partitus
ENSAOCG00000006308	safb	86	42.894	ENSSSCG00000013522	SAFB	96	44.689	Sus_scrofa
ENSAOCG00000006308	safb	98	44.165	ENSTGUG00000000502	-	95	45.862	Taeniopygia_guttata
ENSAOCG00000006308	safb	67	44.631	ENSTGUG00000000489	-	96	51.111	Taeniopygia_guttata
ENSAOCG00000006308	safb	99	76.835	ENSTRUG00000003567	safb	95	76.942	Takifugu_rubripes
ENSAOCG00000006308	safb	95	64.321	ENSTNIG00000015470	safb	100	63.195	Tetraodon_nigroviridis
ENSAOCG00000006308	safb	64	75.000	ENSTTRG00000013588	SAFB	60	75.000	Tursiops_truncatus
ENSAOCG00000006308	safb	79	44.007	ENSUMAG00000009734	SAFB	87	42.339	Ursus_maritimus
ENSAOCG00000006308	safb	71	44.228	ENSVVUG00000013720	SAFB	80	43.924	Vulpes_vulpes
ENSAOCG00000006308	safb	67	43.049	ENSXETG00000008755	safb	92	46.871	Xenopus_tropicalis
ENSAOCG00000006308	safb	100	68.045	ENSXMAG00000003458	safb	100	66.258	Xiphophorus_maculatus