EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000006342 (Gene tree)
Gene ID: 111586441
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 4296 bases
Position: chrNXFZ01004881.1:12125-16420
Accession: 111586441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000021505	RRM_1	PF00076.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000010335	-	884	XM_023296146	ENSAOCP00000021505	99 (aa)	XP_023151914	UPI000C31577C

Gene Model

Click here to download ENSAOCG00000006342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006342's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000006342	slirp	80	31.579	ENSAOCG00000015914	-	56	31.579
ENSAOCG00000006342	slirp	82	33.333	ENSAOCG00000014191	hnrnpd	55	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006342	slirp	90	50.562	ENSG00000119705	SLIRP	93	59.155	Homo_sapiens
ENSAOCG00000006342	slirp	99	87.755	ENSAPOG00000001298	slirp	98	87.755	Acanthochromis_polyacanthus
ENSAOCG00000006342	slirp	71	60.000	ENSAMEG00000003975	SLIRP	77	60.000	Ailuropoda_melanoleuca
ENSAOCG00000006342	slirp	100	84.848	ENSACIG00000023083	slirp	98	84.848	Amphilophus_citrinellus
ENSAOCG00000006342	slirp	99	100.000	ENSAPEG00000015719	-	100	100.000	Amphiprion_percula
ENSAOCG00000006342	slirp	100	100.000	ENSAPEG00000015917	slirp	100	100.000	Amphiprion_percula
ENSAOCG00000006342	slirp	99	75.510	ENSATEG00000013525	slirp	98	75.510	Anabas_testudineus
ENSAOCG00000006342	slirp	97	63.542	ENSAMXG00000018693	slirp	96	63.542	Astyanax_mexicanus
ENSAOCG00000006342	slirp	75	59.459	ENSCJAG00000016946	SLIRP	72	58.209	Callithrix_jacchus
ENSAOCG00000006342	slirp	90	53.846	ENSCAFG00020015876	-	82	53.846	Canis_lupus_dingo
ENSAOCG00000006342	slirp	76	57.333	ENSCCAG00000030130	SLIRP	69	57.333	Cebus_capucinus
ENSAOCG00000006342	slirp	77	56.579	ENSCATG00000036327	SLIRP	72	58.209	Cercocebus_atys
ENSAOCG00000006342	slirp	89	48.864	ENSCSAG00000011736	SLIRP	81	48.864	Chlorocebus_sabaeus
ENSAOCG00000006342	slirp	79	62.821	ENSCPBG00000026327	SLIRP	79	62.821	Chrysemys_picta_bellii
ENSAOCG00000006342	slirp	68	61.194	ENSCANG00000032892	SLIRP	68	61.194	Colobus_angolensis_palliatus
ENSAOCG00000006342	slirp	73	52.778	ENSCGRG00001024068	Slirp	65	52.778	Cricetulus_griseus_chok1gshd
ENSAOCG00000006342	slirp	73	52.778	ENSCGRG00000017440	Slirp	65	52.778	Cricetulus_griseus_crigri
ENSAOCG00000006342	slirp	93	62.366	ENSCSEG00000015766	slirp	95	62.366	Cynoglossus_semilaevis
ENSAOCG00000006342	slirp	89	76.136	ENSCVAG00000012504	slirp	84	76.136	Cyprinodon_variegatus
ENSAOCG00000006342	slirp	95	76.596	ENSDARG00000097753	slirp	93	77.083	Danio_rerio
ENSAOCG00000006342	slirp	86	47.059	ENSDNOG00000007721	SLIRP	78	46.512	Dasypus_novemcinctus
ENSAOCG00000006342	slirp	90	52.222	ENSDORG00000012379	Slirp	81	52.222	Dipodomys_ordii
ENSAOCG00000006342	slirp	90	48.315	ENSETEG00000010345	SLIRP	81	48.315	Echinops_telfairi
ENSAOCG00000006342	slirp	86	58.140	ENSEASG00005020193	SLIRP	77	58.140	Equus_asinus_asinus
ENSAOCG00000006342	slirp	89	50.000	ENSEEUG00000007257	SLIRP	87	50.000	Erinaceus_europaeus
ENSAOCG00000006342	slirp	95	73.404	ENSELUG00000016800	slirp	93	73.404	Esox_lucius
ENSAOCG00000006342	slirp	77	61.842	ENSFCAG00000036326	SLIRP	76	61.842	Felis_catus
ENSAOCG00000006342	slirp	79	58.974	ENSFALG00000012583	SLIRP	85	53.333	Ficedula_albicollis
ENSAOCG00000006342	slirp	86	55.814	ENSFDAG00000008347	SLIRP	76	55.814	Fukomys_damarensis
ENSAOCG00000006342	slirp	79	78.205	ENSFHEG00000004709	slirp	85	78.205	Fundulus_heteroclitus
ENSAOCG00000006342	slirp	97	73.958	ENSGMOG00000016948	slirp	92	73.958	Gadus_morhua
ENSAOCG00000006342	slirp	93	51.064	ENSGALG00000031238	SLIRP	95	51.064	Gallus_gallus
ENSAOCG00000006342	slirp	99	75.510	ENSGAFG00000010998	slirp	98	75.510	Gambusia_affinis
ENSAOCG00000006342	slirp	79	84.615	ENSGACG00000020137	slirp	91	84.615	Gasterosteus_aculeatus
ENSAOCG00000006342	slirp	99	61.616	ENSGAGG00000009953	SLIRP	68	61.616	Gopherus_agassizii
ENSAOCG00000006342	slirp	90	50.562	ENSGGOG00000011059	-	73	60.294	Gorilla_gorilla
ENSAOCG00000006342	slirp	86	50.000	ENSHGLG00000018491	SLIRP	77	50.000	Heterocephalus_glaber_female
ENSAOCG00000006342	slirp	86	50.000	ENSHGLG00100014153	SLIRP	77	50.000	Heterocephalus_glaber_male
ENSAOCG00000006342	slirp	94	84.946	ENSHCOG00000006795	slirp	94	84.946	Hippocampus_comes
ENSAOCG00000006342	slirp	97	73.958	ENSIPUG00000010214	SLIRP	96	73.958	Ictalurus_punctatus
ENSAOCG00000006342	slirp	87	54.023	ENSSTOG00000034316	SLIRP	78	54.023	Ictidomys_tridecemlineatus
ENSAOCG00000006342	slirp	99	67.347	ENSKMAG00000002038	slirp	94	67.347	Kryptolebias_marmoratus
ENSAOCG00000006342	slirp	99	67.347	ENSLBEG00000007564	slirp	98	67.347	Labrus_bergylta
ENSAOCG00000006342	slirp	96	73.684	ENSLACG00000013434	SLIRP	91	73.684	Latimeria_chalumnae
ENSAOCG00000006342	slirp	89	48.864	ENSMFAG00000042960	SLIRP	73	57.353	Macaca_fascicularis
ENSAOCG00000006342	slirp	85	53.571	ENSMMUG00000029256	SLIRP	72	58.209	Macaca_mulatta
ENSAOCG00000006342	slirp	89	48.864	ENSMNEG00000028921	SLIRP	73	57.353	Macaca_nemestrina
ENSAOCG00000006342	slirp	91	50.000	ENSMLEG00000043644	SLIRP	80	50.000	Mandrillus_leucophaeus
ENSAOCG00000006342	slirp	100	86.869	ENSMZEG00005004617	slirp	100	86.869	Maylandia_zebra
ENSAOCG00000006342	slirp	91	47.778	ENSMAUG00000003857	Slirp	81	47.778	Mesocricetus_auratus
ENSAOCG00000006342	slirp	72	61.972	ENSMICG00000012080	SLIRP	66	61.972	Microcebus_murinus
ENSAOCG00000006342	slirp	76	54.667	ENSMOCG00000016019	Slirp	69	55.714	Microtus_ochrogaster
ENSAOCG00000006342	slirp	99	83.673	ENSMMOG00000018268	slirp	98	83.673	Mola_mola
ENSAOCG00000006342	slirp	71	58.571	ENSMODG00000005207	-	99	58.571	Monodelphis_domestica
ENSAOCG00000006342	slirp	98	75.258	ENSMALG00000012581	slirp	97	75.258	Monopterus_albus
ENSAOCG00000006342	slirp	87	51.724	MGP_CAROLIEiJ_G0017995	Slirp	81	51.724	Mus_caroli
ENSAOCG00000006342	slirp	90	51.111	ENSMUSG00000021040	Slirp	80	51.111	Mus_musculus
ENSAOCG00000006342	slirp	90	51.111	MGP_SPRETEiJ_G0018840	Slirp	80	51.111	Mus_spretus
ENSAOCG00000006342	slirp	74	64.384	ENSMLUG00000024998	-	66	64.384	Myotis_lucifugus
ENSAOCG00000006342	slirp	84	60.241	ENSMLUG00000029544	-	73	60.241	Myotis_lucifugus
ENSAOCG00000006342	slirp	87	48.276	ENSNGAG00000016363	Slirp	84	48.276	Nannospalax_galili
ENSAOCG00000006342	slirp	90	47.191	ENSNLEG00000027238	-	80	55.714	Nomascus_leucogenys
ENSAOCG00000006342	slirp	90	47.191	ENSNLEG00000032459	-	82	47.191	Nomascus_leucogenys
ENSAOCG00000006342	slirp	89	52.222	ENSODEG00000012580	SLIRP	76	58.571	Octodon_degus
ENSAOCG00000006342	slirp	100	85.859	ENSONIG00000011692	slirp	100	85.859	Oreochromis_niloticus
ENSAOCG00000006342	slirp	90	54.945	ENSOANG00000022366	SLIRP	82	54.945	Ornithorhynchus_anatinus
ENSAOCG00000006342	slirp	99	81.633	ENSORLG00000010761	slirp	76	81.633	Oryzias_latipes
ENSAOCG00000006342	slirp	99	80.612	ENSORLG00020022188	slirp	98	80.612	Oryzias_latipes_hni
ENSAOCG00000006342	slirp	99	81.633	ENSORLG00015020171	slirp	97	81.633	Oryzias_latipes_hsok
ENSAOCG00000006342	slirp	99	80.612	ENSOMEG00000019321	slirp	98	80.612	Oryzias_melastigma
ENSAOCG00000006342	slirp	87	56.977	ENSPPAG00000040710	-	78	56.977	Pan_paniscus
ENSAOCG00000006342	slirp	77	61.842	ENSPPRG00000014350	SLIRP	76	61.842	Panthera_pardus
ENSAOCG00000006342	slirp	77	61.842	ENSPTIG00000014196	SLIRP	76	61.842	Panthera_tigris_altaica
ENSAOCG00000006342	slirp	87	55.814	ENSPTRG00000030691	SLIRP	80	55.814	Pan_troglodytes
ENSAOCG00000006342	slirp	75	58.108	ENSPANG00000026323	SLIRP	72	59.701	Papio_anubis
ENSAOCG00000006342	slirp	70	69.565	ENSPKIG00000008831	slirp	68	69.565	Paramormyrops_kingsleyae
ENSAOCG00000006342	slirp	79	76.923	ENSPMGG00000010541	slirp	90	76.923	Periophthalmus_magnuspinnatus
ENSAOCG00000006342	slirp	89	46.591	ENSPEMG00000013234	Slirp	77	46.591	Peromyscus_maniculatus_bairdii
ENSAOCG00000006342	slirp	85	53.571	ENSPMAG00000009355	slirp	93	53.571	Petromyzon_marinus
ENSAOCG00000006342	slirp	79	53.846	ENSPCIG00000026842	-	84	53.846	Phascolarctos_cinereus
ENSAOCG00000006342	slirp	98	75.258	ENSPFOG00000006758	slirp	97	75.258	Poecilia_formosa
ENSAOCG00000006342	slirp	98	76.289	ENSPLAG00000011140	slirp	97	76.289	Poecilia_latipinna
ENSAOCG00000006342	slirp	98	75.258	ENSPMEG00000019535	slirp	97	75.258	Poecilia_mexicana
ENSAOCG00000006342	slirp	98	75.258	ENSPREG00000011673	slirp	97	75.258	Poecilia_reticulata
ENSAOCG00000006342	slirp	86	57.647	ENSPPYG00000006030	SLIRP	78	56.977	Pongo_abelii
ENSAOCG00000006342	slirp	78	58.442	ENSPCOG00000015159	SLIRP	66	59.155	Propithecus_coquereli
ENSAOCG00000006342	slirp	97	82.292	ENSPNAG00000008633	slirp	97	82.292	Pygocentrus_nattereri
ENSAOCG00000006342	slirp	68	58.209	ENSRBIG00000032998	-	62	58.209	Rhinopithecus_bieti
ENSAOCG00000006342	slirp	66	58.462	ENSRBIG00000031396	-	65	58.462	Rhinopithecus_bieti
ENSAOCG00000006342	slirp	86	51.765	ENSRBIG00000035817	-	78	51.765	Rhinopithecus_bieti
ENSAOCG00000006342	slirp	89	53.409	ENSRBIG00000032222	-	81	53.409	Rhinopithecus_bieti
ENSAOCG00000006342	slirp	89	53.409	ENSRROG00000036656	-	81	53.409	Rhinopithecus_roxellana
ENSAOCG00000006342	slirp	72	60.563	ENSRROG00000041312	-	70	60.563	Rhinopithecus_roxellana
ENSAOCG00000006342	slirp	68	59.701	ENSRROG00000017133	-	70	59.701	Rhinopithecus_roxellana
ENSAOCG00000006342	slirp	66	60.000	ENSRROG00000035604	-	65	60.000	Rhinopithecus_roxellana
ENSAOCG00000006342	slirp	82	55.556	ENSSBOG00000020014	SLIRP	78	58.667	Saimiri_boliviensis_boliviensis
ENSAOCG00000006342	slirp	97	67.708	ENSSFOG00015011165	slirp	96	67.708	Scleropages_formosus
ENSAOCG00000006342	slirp	99	53.000	ENSSMAG00000012930	slirp	98	53.000	Scophthalmus_maximus
ENSAOCG00000006342	slirp	99	82.653	ENSSDUG00000021883	slirp	64	82.653	Seriola_dumerili
ENSAOCG00000006342	slirp	99	82.653	ENSSLDG00000023136	slirp	89	82.653	Seriola_lalandi_dorsalis
ENSAOCG00000006342	slirp	78	64.935	ENSSPUG00000009346	SLIRP	79	64.935	Sphenodon_punctatus
ENSAOCG00000006342	slirp	99	75.510	ENSSPAG00000013477	slirp	98	75.510	Stegastes_partitus
ENSAOCG00000006342	slirp	87	56.322	ENSSSCG00000028167	SLIRP	78	56.322	Sus_scrofa
ENSAOCG00000006342	slirp	79	57.692	ENSTGUG00000012337	SLIRP	88	53.763	Taeniopygia_guttata
ENSAOCG00000006342	slirp	97	73.196	ENSTRUG00000020127	slirp	96	73.196	Takifugu_rubripes
ENSAOCG00000006342	slirp	89	56.667	ENSUAMG00000022445	SLIRP	80	56.667	Ursus_americanus
ENSAOCG00000006342	slirp	87	57.955	ENSUMAG00000007166	SLIRP	78	57.955	Ursus_maritimus
ENSAOCG00000006342	slirp	90	52.809	ENSVPAG00000001781	SLIRP	81	52.809	Vicugna_pacos
ENSAOCG00000006342	slirp	89	54.945	ENSVVUG00000004436	SLIRP	81	54.945	Vulpes_vulpes
ENSAOCG00000006342	slirp	80	69.620	ENSXETG00000030343	SLIRP	89	69.620	Xenopus_tropicalis
ENSAOCG00000006342	slirp	99	74.490	ENSXCOG00000009422	slirp	98	74.490	Xiphophorus_couchianus
ENSAOCG00000006342	slirp	99	76.531	ENSXMAG00000015655	slirp	98	76.531	Xiphophorus_maculatus