EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000006572 (Gene tree)
Gene ID: 111583221
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 9417 bases
Position: chrNXFZ01004040.1:123722-133138
Accession: 111583221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000021622	PRP4	PF08799.11	2.1e-13	1	1
ENSAOCP00000003288	PRP4	PF08799.11	2.2e-13	1	1
ENSAOCP00000021634	PRP4	PF08799.11	2.3e-13	1	1
ENSAOCP00000021622	Prp18	PF02840.15	1.4e-62	1	1
ENSAOCP00000003288	Prp18	PF02840.15	1.5e-62	1	1
ENSAOCP00000021634	Prp18	PF02840.15	1.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000010032	-	1330	XM_023292202	ENSAOCP00000003288	373 (aa)	XP_023147970	-
ENSAOCT00000010047	-	1621	XM_023292199	ENSAOCP00000021622	365 (aa)	XP_023147967	-
ENSAOCT00000010010	-	1357	-	ENSAOCP00000021634	382 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000006572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006572	prpf18	94	83.041	ENSG00000165630	PRPF18	98	85.672	Homo_sapiens
ENSAOCG00000006572	prpf18	94	99.123	ENSAPOG00000024177	prpf18	98	99.401	Acanthochromis_polyacanthus
ENSAOCG00000006572	prpf18	94	82.456	ENSAMEG00000013591	-	98	85.075	Ailuropoda_melanoleuca
ENSAOCG00000006572	prpf18	94	93.275	ENSACIG00000001186	prpf18	98	95.509	Amphilophus_citrinellus
ENSAOCG00000006572	prpf18	94	100.000	ENSAPEG00000004564	prpf18	98	100.000	Amphiprion_percula
ENSAOCG00000006572	prpf18	94	94.152	ENSATEG00000000303	prpf18	98	96.707	Anabas_testudineus
ENSAOCG00000006572	prpf18	93	81.471	ENSAPLG00000003387	-	97	83.183	Anas_platyrhynchos
ENSAOCG00000006572	prpf18	94	83.188	ENSACAG00000000818	-	98	85.163	Anolis_carolinensis
ENSAOCG00000006572	prpf18	94	83.965	ENSANAG00000037445	-	98	85.672	Aotus_nancymaae
ENSAOCG00000006572	prpf18	94	92.105	ENSACLG00000026296	prpf18	98	94.910	Astatotilapia_calliptera
ENSAOCG00000006572	prpf18	94	90.058	ENSAMXG00000012848	prpf18	98	90.087	Astyanax_mexicanus
ENSAOCG00000006572	prpf18	94	83.090	ENSBTAG00000017244	PRPF18	98	84.776	Bos_taurus
ENSAOCG00000006572	prpf18	93	40.171	WBGene00009320	F32B6.3	96	39.714	Caenorhabditis_elegans
ENSAOCG00000006572	prpf18	94	83.965	ENSCJAG00000009432	-	98	85.672	Callithrix_jacchus
ENSAOCG00000006572	prpf18	94	82.456	ENSCAFG00000004735	-	98	85.075	Canis_familiaris
ENSAOCG00000006572	prpf18	94	82.456	ENSCAFG00020007712	-	98	85.075	Canis_lupus_dingo
ENSAOCG00000006572	prpf18	94	83.090	ENSCHIG00000000499	-	98	84.776	Capra_hircus
ENSAOCG00000006572	prpf18	94	83.382	ENSTSYG00000003517	-	98	85.075	Carlito_syrichta
ENSAOCG00000006572	prpf18	94	83.965	ENSCPOG00000021069	-	98	85.672	Cavia_porcellus
ENSAOCG00000006572	prpf18	94	83.965	ENSCCAG00000036822	-	98	85.672	Cebus_capucinus
ENSAOCG00000006572	prpf18	94	72.222	ENSCATG00000016633	-	98	74.627	Cercocebus_atys
ENSAOCG00000006572	prpf18	94	83.382	ENSCLAG00000011770	-	98	85.075	Chinchilla_lanigera
ENSAOCG00000006572	prpf18	94	83.965	ENSCSAG00000013109	-	98	84.012	Chlorocebus_sabaeus
ENSAOCG00000006572	prpf18	94	79.494	ENSCPBG00000003100	-	98	81.662	Chrysemys_picta_bellii
ENSAOCG00000006572	prpf18	96	54.441	ENSCING00000020481	-	98	54.441	Ciona_intestinalis
ENSAOCG00000006572	prpf18	96	53.409	ENSCSAVG00000010546	-	97	55.490	Ciona_savignyi
ENSAOCG00000006572	prpf18	94	83.965	ENSCANG00000034900	-	98	85.672	Colobus_angolensis_palliatus
ENSAOCG00000006572	prpf18	94	83.041	ENSCGRG00001023665	Prpf18	98	85.075	Cricetulus_griseus_chok1gshd
ENSAOCG00000006572	prpf18	94	83.041	ENSCGRG00000014690	Prpf18	98	85.075	Cricetulus_griseus_crigri
ENSAOCG00000006572	prpf18	94	91.520	ENSCSEG00000005536	prpf18	98	91.916	Cynoglossus_semilaevis
ENSAOCG00000006572	prpf18	94	93.275	ENSCVAG00000012401	prpf18	98	94.012	Cyprinodon_variegatus
ENSAOCG00000006572	prpf18	94	89.796	ENSDARG00000058306	prpf18	98	91.045	Danio_rerio
ENSAOCG00000006572	prpf18	94	82.456	ENSDNOG00000035607	-	98	85.075	Dasypus_novemcinctus
ENSAOCG00000006572	prpf18	94	82.164	ENSDORG00000000858	Prpf18	98	84.776	Dipodomys_ordii
ENSAOCG00000006572	prpf18	96	51.852	FBgn0027784	Prp18	99	50.712	Drosophila_melanogaster
ENSAOCG00000006572	prpf18	94	73.684	ENSETEG00000015060	-	98	76.119	Echinops_telfairi
ENSAOCG00000006572	prpf18	94	68.713	ENSEBUG00000016502	prpf18	97	68.235	Eptatretus_burgeri
ENSAOCG00000006572	prpf18	94	83.673	ENSEASG00005019373	-	98	85.373	Equus_asinus_asinus
ENSAOCG00000006572	prpf18	94	83.673	ENSECAG00000006997	PRPF18	98	85.373	Equus_caballus
ENSAOCG00000006572	prpf18	89	50.309	ENSEEUG00000001171	-	100	51.582	Erinaceus_europaeus
ENSAOCG00000006572	prpf18	94	88.663	ENSELUG00000022190	prpf18	98	88.988	Esox_lucius
ENSAOCG00000006572	prpf18	94	83.090	ENSFCAG00000004436	-	98	84.776	Felis_catus
ENSAOCG00000006572	prpf18	89	80.923	ENSFALG00000001912	-	97	81.231	Ficedula_albicollis
ENSAOCG00000006572	prpf18	88	84.688	ENSFDAG00000014026	-	98	87.540	Fukomys_damarensis
ENSAOCG00000006572	prpf18	96	57.102	ENSFDAG00000010713	-	98	57.102	Fukomys_damarensis
ENSAOCG00000006572	prpf18	73	95.094	ENSFHEG00000020125	prpf18	95	95.000	Fundulus_heteroclitus
ENSAOCG00000006572	prpf18	94	85.673	ENSGMOG00000012210	prpf18	98	88.024	Gadus_morhua
ENSAOCG00000006572	prpf18	94	82.456	ENSGALG00000043593	-	98	84.179	Gallus_gallus
ENSAOCG00000006572	prpf18	94	90.643	ENSGAFG00000006034	prpf18	98	93.114	Gambusia_affinis
ENSAOCG00000006572	prpf18	94	89.181	ENSGACG00000012232	prpf18	98	91.317	Gasterosteus_aculeatus
ENSAOCG00000006572	prpf18	94	83.041	ENSGAGG00000016878	-	98	84.776	Gopherus_agassizii
ENSAOCG00000006572	prpf18	89	83.077	ENSGGOG00000025188	-	96	84.810	Gorilla_gorilla
ENSAOCG00000006572	prpf18	94	94.737	ENSHBUG00000010264	prpf18	98	94.910	Haplochromis_burtoni
ENSAOCG00000006572	prpf18	94	82.456	ENSHGLG00000018534	PRPF18	98	85.075	Heterocephalus_glaber_female
ENSAOCG00000006572	prpf18	88	84.375	ENSHGLG00100012161	-	96	87.220	Heterocephalus_glaber_male
ENSAOCG00000006572	prpf18	94	96.199	ENSHCOG00000015987	prpf18	98	96.707	Hippocampus_comes
ENSAOCG00000006572	prpf18	94	83.768	ENSIPUG00000007432	prpf18	98	83.815	Ictalurus_punctatus
ENSAOCG00000006572	prpf18	94	83.090	ENSSTOG00000008735	-	98	84.776	Ictidomys_tridecemlineatus
ENSAOCG00000006572	prpf18	94	60.933	ENSJJAG00000015191	-	98	62.798	Jaculus_jaculus
ENSAOCG00000006572	prpf18	94	83.041	ENSJJAG00000024041	-	98	85.672	Jaculus_jaculus
ENSAOCG00000006572	prpf18	94	92.982	ENSKMAG00000012124	prpf18	98	93.413	Kryptolebias_marmoratus
ENSAOCG00000006572	prpf18	92	88.724	ENSLBEG00000028466	prpf18	97	91.185	Labrus_bergylta
ENSAOCG00000006572	prpf18	94	82.507	ENSLACG00000009885	prpf18	98	84.478	Latimeria_chalumnae
ENSAOCG00000006572	prpf18	94	87.464	ENSLOCG00000016736	prpf18	98	88.955	Lepisosteus_oculatus
ENSAOCG00000006572	prpf18	94	83.041	ENSLAFG00000007753	-	98	85.672	Loxodonta_africana
ENSAOCG00000006572	prpf18	94	83.965	ENSMFAG00000000540	-	98	85.672	Macaca_fascicularis
ENSAOCG00000006572	prpf18	94	83.965	ENSMMUG00000015071	PRPF18	98	85.672	Macaca_mulatta
ENSAOCG00000006572	prpf18	94	83.965	ENSMNEG00000024679	-	98	85.672	Macaca_nemestrina
ENSAOCG00000006572	prpf18	94	67.836	ENSMLEG00000031715	-	98	70.149	Mandrillus_leucophaeus
ENSAOCG00000006572	prpf18	94	94.737	ENSMAMG00000006610	prpf18	98	94.910	Mastacembelus_armatus
ENSAOCG00000006572	prpf18	94	94.737	ENSMZEG00005019392	prpf18	98	94.910	Maylandia_zebra
ENSAOCG00000006572	prpf18	94	82.456	ENSMGAG00000005023	-	98	84.179	Meleagris_gallopavo
ENSAOCG00000006572	prpf18	94	84.257	ENSMICG00000006572	-	98	85.970	Microcebus_murinus
ENSAOCG00000006572	prpf18	94	83.041	ENSMOCG00000021468	Prpf18	98	85.672	Microtus_ochrogaster
ENSAOCG00000006572	prpf18	94	91.520	ENSMMOG00000013012	prpf18	98	93.713	Mola_mola
ENSAOCG00000006572	prpf18	94	75.146	ENSMODG00000024043	-	98	77.015	Monodelphis_domestica
ENSAOCG00000006572	prpf18	92	80.178	ENSMODG00000016902	-	92	80.178	Monodelphis_domestica
ENSAOCG00000006572	prpf18	94	85.088	ENSMALG00000005486	prpf18	98	86.944	Monopterus_albus
ENSAOCG00000006572	prpf18	94	82.456	MGP_CAROLIEiJ_G0023143	Prpf18	100	95.890	Mus_caroli
ENSAOCG00000006572	prpf18	94	82.749	ENSMUSG00000039449	Prpf18	100	95.890	Mus_musculus
ENSAOCG00000006572	prpf18	94	82.749	MGP_PahariEiJ_G0019203	Prpf18	100	95.890	Mus_pahari
ENSAOCG00000006572	prpf18	94	82.456	MGP_SPRETEiJ_G0024061	Prpf18	100	95.890	Mus_spretus
ENSAOCG00000006572	prpf18	94	82.164	ENSMPUG00000000938	-	98	84.776	Mustela_putorius_furo
ENSAOCG00000006572	prpf18	94	82.164	ENSMLUG00000009200	-	98	84.776	Myotis_lucifugus
ENSAOCG00000006572	prpf18	94	83.041	ENSNGAG00000012500	-	98	85.672	Nannospalax_galili
ENSAOCG00000006572	prpf18	61	83.784	ENSNGAG00000023550	-	80	83.857	Nannospalax_galili
ENSAOCG00000006572	prpf18	94	92.398	ENSNBRG00000001778	prpf18	98	95.210	Neolamprologus_brichardi
ENSAOCG00000006572	prpf18	94	83.965	ENSNLEG00000012186	-	98	85.672	Nomascus_leucogenys
ENSAOCG00000006572	prpf18	69	72.510	ENSMEUG00000005032	-	73	71.032	Notamacropus_eugenii
ENSAOCG00000006572	prpf18	75	63.736	ENSOPRG00000002153	-	100	66.415	Ochotona_princeps
ENSAOCG00000006572	prpf18	94	82.164	ENSODEG00000003770	-	98	84.776	Octodon_degus
ENSAOCG00000006572	prpf18	96	90.057	ENSONIG00000014854	prpf18	97	94.118	Oreochromis_niloticus
ENSAOCG00000006572	prpf18	94	83.382	ENSOANG00000015404	-	98	84.776	Ornithorhynchus_anatinus
ENSAOCG00000006572	prpf18	94	82.749	ENSOCUG00000027756	-	94	86.250	Oryctolagus_cuniculus
ENSAOCG00000006572	prpf18	94	93.567	ENSORLG00000010293	prpf18	98	93.586	Oryzias_latipes
ENSAOCG00000006572	prpf18	94	93.567	ENSORLG00020001530	prpf18	98	93.713	Oryzias_latipes_hni
ENSAOCG00000006572	prpf18	94	93.275	ENSORLG00015013705	prpf18	98	93.413	Oryzias_latipes_hsok
ENSAOCG00000006572	prpf18	94	92.982	ENSOMEG00000009167	prpf18	98	95.509	Oryzias_melastigma
ENSAOCG00000006572	prpf18	94	82.164	ENSOGAG00000007294	-	98	84.776	Otolemur_garnettii
ENSAOCG00000006572	prpf18	94	83.090	ENSOARG00000006243	-	98	83.483	Ovis_aries
ENSAOCG00000006572	prpf18	94	83.965	ENSPPAG00000041959	-	98	85.672	Pan_paniscus
ENSAOCG00000006572	prpf18	94	82.456	ENSPPRG00000000107	-	98	84.776	Panthera_pardus
ENSAOCG00000006572	prpf18	94	82.456	ENSPTIG00000021094	-	98	84.776	Panthera_tigris_altaica
ENSAOCG00000006572	prpf18	94	83.965	ENSPTRG00000002306	PRPF18	98	85.672	Pan_troglodytes
ENSAOCG00000006572	prpf18	94	83.673	ENSPANG00000023346	-	98	85.373	Papio_anubis
ENSAOCG00000006572	prpf18	94	87.172	ENSPKIG00000014128	prpf18	94	87.209	Paramormyrops_kingsleyae
ENSAOCG00000006572	prpf18	94	82.749	ENSPSIG00000016064	-	98	84.776	Pelodiscus_sinensis
ENSAOCG00000006572	prpf18	94	85.131	ENSPMGG00000016486	prpf18	98	87.164	Periophthalmus_magnuspinnatus
ENSAOCG00000006572	prpf18	94	82.749	ENSPEMG00000013704	Prpf18	98	85.373	Peromyscus_maniculatus_bairdii
ENSAOCG00000006572	prpf18	94	74.561	ENSPMAG00000000204	prpf18	98	74.706	Petromyzon_marinus
ENSAOCG00000006572	prpf18	89	82.769	ENSPCIG00000012963	-	99	84.494	Phascolarctos_cinereus
ENSAOCG00000006572	prpf18	94	92.398	ENSPFOG00000017611	prpf18	98	92.420	Poecilia_formosa
ENSAOCG00000006572	prpf18	94	90.643	ENSPLAG00000000369	prpf18	98	93.114	Poecilia_latipinna
ENSAOCG00000006572	prpf18	94	92.690	ENSPMEG00000005183	prpf18	98	93.413	Poecilia_mexicana
ENSAOCG00000006572	prpf18	94	90.058	ENSPREG00000015232	prpf18	98	92.515	Poecilia_reticulata
ENSAOCG00000006572	prpf18	94	82.749	ENSPPYG00000002101	PRPF18	98	85.373	Pongo_abelii
ENSAOCG00000006572	prpf18	94	64.912	ENSPCAG00000010833	-	98	67.164	Procavia_capensis
ENSAOCG00000006572	prpf18	94	78.134	ENSPCOG00000013057	-	98	80.299	Propithecus_coquereli
ENSAOCG00000006572	prpf18	94	49.708	ENSPVAG00000002947	-	98	51.045	Pteropus_vampyrus
ENSAOCG00000006572	prpf18	94	94.444	ENSPNYG00000003554	prpf18	98	94.611	Pundamilia_nyererei
ENSAOCG00000006572	prpf18	94	89.504	ENSPNAG00000023151	prpf18	98	89.535	Pygocentrus_nattereri
ENSAOCG00000006572	prpf18	94	83.041	ENSRNOG00000018396	Prpf18	98	85.075	Rattus_norvegicus
ENSAOCG00000006572	prpf18	94	84.257	ENSRBIG00000028028	-	98	85.970	Rhinopithecus_bieti
ENSAOCG00000006572	prpf18	94	83.965	ENSRROG00000040695	-	98	85.672	Rhinopithecus_roxellana
ENSAOCG00000006572	prpf18	94	83.965	ENSSBOG00000034482	-	98	85.672	Saimiri_boliviensis_boliviensis
ENSAOCG00000006572	prpf18	94	69.096	ENSSHAG00000009669	-	98	70.746	Sarcophilus_harrisii
ENSAOCG00000006572	prpf18	94	83.041	ENSSHAG00000016463	-	98	85.075	Sarcophilus_harrisii
ENSAOCG00000006572	prpf18	94	86.297	ENSSFOG00015022118	prpf18	98	80.588	Scleropages_formosus
ENSAOCG00000006572	prpf18	71	45.076	ENSSFOG00015021154	-	89	48.069	Scleropages_formosus
ENSAOCG00000006572	prpf18	94	92.105	ENSSMAG00000005308	prpf18	98	92.216	Scophthalmus_maximus
ENSAOCG00000006572	prpf18	94	97.661	ENSSDUG00000015428	prpf18	98	97.904	Seriola_dumerili
ENSAOCG00000006572	prpf18	94	97.368	ENSSLDG00000023989	prpf18	98	97.605	Seriola_lalandi_dorsalis
ENSAOCG00000006572	prpf18	94	54.094	ENSSARG00000005307	-	98	56.119	Sorex_araneus
ENSAOCG00000006572	prpf18	94	82.749	ENSSPUG00000002619	-	98	84.776	Sphenodon_punctatus
ENSAOCG00000006572	prpf18	94	97.953	ENSSPAG00000019502	prpf18	98	98.204	Stegastes_partitus
ENSAOCG00000006572	prpf18	94	83.382	ENSSSCG00000026354	-	98	85.075	Sus_scrofa
ENSAOCG00000006572	prpf18	94	82.164	ENSTGUG00000002286	-	98	83.881	Taeniopygia_guttata
ENSAOCG00000006572	prpf18	94	88.012	ENSTRUG00000011278	prpf18	98	90.419	Takifugu_rubripes
ENSAOCG00000006572	prpf18	94	88.012	ENSTNIG00000000911	prpf18	98	90.419	Tetraodon_nigroviridis
ENSAOCG00000006572	prpf18	74	100.000	ENSTBEG00000013011	-	77	100.000	Tupaia_belangeri
ENSAOCG00000006572	prpf18	94	83.041	ENSTTRG00000011117	PRPF18	98	85.970	Tursiops_truncatus
ENSAOCG00000006572	prpf18	85	84.887	ENSUAMG00000001815	-	91	87.829	Ursus_americanus
ENSAOCG00000006572	prpf18	94	77.485	ENSUMAG00000012329	-	98	80.000	Ursus_maritimus
ENSAOCG00000006572	prpf18	94	76.901	ENSVPAG00000011486	-	98	79.403	Vicugna_pacos
ENSAOCG00000006572	prpf18	94	83.382	ENSVVUG00000005453	-	98	85.075	Vulpes_vulpes
ENSAOCG00000006572	prpf18	94	73.926	ENSXETG00000024057	prpf18	98	76.627	Xenopus_tropicalis
ENSAOCG00000006572	prpf18	94	90.698	ENSXCOG00000020414	prpf18	98	93.155	Xiphophorus_couchianus
ENSAOCG00000006572	prpf18	94	92.982	ENSXMAG00000004713	prpf18	89	93.713	Xiphophorus_maculatus