EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000006616 (Gene tree)
Gene ID: 111574783
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 4106 bases
Position: chrNXFZ01003007.1:583316-587421
Accession: 111574783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003348	MRP-S27	PF10037.9	4.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009941	-	1892	XM_023279549	ENSAOCP00000003348	388 (aa)	XP_023135317	-

Gene Model

Click here to download ENSAOCG00000006616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006616	ptcd2	93	45.753	ENSG00000049883	PTCD2	100	39.901	Homo_sapiens
ENSAOCG00000006616	ptcd2	98	94.226	ENSAPOG00000020682	ptcd2	100	94.226	Acanthochromis_polyacanthus
ENSAOCG00000006616	ptcd2	95	44.652	ENSAMEG00000007194	PTCD2	96	44.652	Ailuropoda_melanoleuca
ENSAOCG00000006616	ptcd2	89	71.552	ENSACIG00000002053	ptcd2	100	71.552	Amphilophus_citrinellus
ENSAOCG00000006616	ptcd2	100	99.227	ENSAPEG00000022926	ptcd2	100	99.227	Amphiprion_percula
ENSAOCG00000006616	ptcd2	100	45.918	ENSACAG00000009747	PTCD2	100	45.918	Anolis_carolinensis
ENSAOCG00000006616	ptcd2	89	46.264	ENSANAG00000029353	PTCD2	90	46.264	Aotus_nancymaae
ENSAOCG00000006616	ptcd2	100	81.443	ENSACLG00000027742	ptcd2	100	81.443	Astatotilapia_calliptera
ENSAOCG00000006616	ptcd2	98	51.958	ENSAMXG00000029404	ptcd2	100	51.958	Astyanax_mexicanus
ENSAOCG00000006616	ptcd2	89	46.839	ENSBTAG00000014675	PTCD2	91	46.839	Bos_taurus
ENSAOCG00000006616	ptcd2	89	45.977	ENSCJAG00000016364	PTCD2	90	45.977	Callithrix_jacchus
ENSAOCG00000006616	ptcd2	94	46.011	ENSCAFG00000007982	PTCD2	86	46.721	Canis_familiaris
ENSAOCG00000006616	ptcd2	89	47.688	ENSCAFG00020019147	PTCD2	97	47.688	Canis_lupus_dingo
ENSAOCG00000006616	ptcd2	89	47.126	ENSCHIG00000017118	PTCD2	91	47.126	Capra_hircus
ENSAOCG00000006616	ptcd2	92	44.474	ENSCPOG00000040168	PTCD2	97	44.474	Cavia_porcellus
ENSAOCG00000006616	ptcd2	89	46.552	ENSCCAG00000029389	-	90	46.552	Cebus_capucinus
ENSAOCG00000006616	ptcd2	70	47.619	ENSCCAG00000021996	-	84	47.619	Cebus_capucinus
ENSAOCG00000006616	ptcd2	96	46.524	ENSCATG00000019069	PTCD2	98	46.524	Cercocebus_atys
ENSAOCG00000006616	ptcd2	89	45.690	ENSCLAG00000000072	PTCD2	91	45.690	Chinchilla_lanigera
ENSAOCG00000006616	ptcd2	89	47.126	ENSCSAG00000015623	PTCD2	98	46.400	Chlorocebus_sabaeus
ENSAOCG00000006616	ptcd2	65	54.118	ENSCHOG00000010634	PTCD2	73	54.118	Choloepus_hoffmanni
ENSAOCG00000006616	ptcd2	91	47.887	ENSCPBG00000000216	PTCD2	91	47.887	Chrysemys_picta_bellii
ENSAOCG00000006616	ptcd2	96	46.400	ENSCANG00000035636	PTCD2	96	46.400	Colobus_angolensis_palliatus
ENSAOCG00000006616	ptcd2	91	45.232	ENSCGRG00001015289	Ptcd2	80	45.232	Cricetulus_griseus_chok1gshd
ENSAOCG00000006616	ptcd2	91	45.232	ENSCGRG00000006193	Ptcd2	80	45.232	Cricetulus_griseus_crigri
ENSAOCG00000006616	ptcd2	100	74.359	ENSCVAG00000001285	ptcd2	100	74.359	Cyprinodon_variegatus
ENSAOCG00000006616	ptcd2	98	53.786	ENSDARG00000035391	ptcd2	100	53.786	Danio_rerio
ENSAOCG00000006616	ptcd2	89	46.398	ENSDNOG00000008719	PTCD2	91	46.398	Dasypus_novemcinctus
ENSAOCG00000006616	ptcd2	96	45.288	ENSDORG00000004921	Ptcd2	99	45.288	Dipodomys_ordii
ENSAOCG00000006616	ptcd2	89	43.266	ENSETEG00000016542	PTCD2	90	43.266	Echinops_telfairi
ENSAOCG00000006616	ptcd2	92	46.978	ENSEASG00005018038	PTCD2	95	46.978	Equus_asinus_asinus
ENSAOCG00000006616	ptcd2	92	46.978	ENSECAG00000007022	PTCD2	94	46.978	Equus_caballus
ENSAOCG00000006616	ptcd2	93	46.448	ENSEEUG00000014031	PTCD2	94	46.448	Erinaceus_europaeus
ENSAOCG00000006616	ptcd2	98	61.358	ENSELUG00000003584	ptcd2	100	61.358	Esox_lucius
ENSAOCG00000006616	ptcd2	81	46.667	ENSFCAG00000045432	PTCD2	74	46.667	Felis_catus
ENSAOCG00000006616	ptcd2	84	44.954	ENSFALG00000010299	PTCD2	99	44.954	Ficedula_albicollis
ENSAOCG00000006616	ptcd2	89	45.115	ENSFDAG00000018461	PTCD2	91	45.115	Fukomys_damarensis
ENSAOCG00000006616	ptcd2	98	64.230	ENSGMOG00000003637	ptcd2	99	64.230	Gadus_morhua
ENSAOCG00000006616	ptcd2	91	44.915	ENSGALG00000038260	PTCD2	92	44.915	Gallus_gallus
ENSAOCG00000006616	ptcd2	89	51.297	ENSGAGG00000021952	PTCD2	89	51.297	Gopherus_agassizii
ENSAOCG00000006616	ptcd2	93	45.753	ENSGGOG00000010695	PTCD2	94	45.753	Gorilla_gorilla
ENSAOCG00000006616	ptcd2	100	80.412	ENSHBUG00000009191	ptcd2	100	80.412	Haplochromis_burtoni
ENSAOCG00000006616	ptcd2	93	43.548	ENSHGLG00000001234	PTCD2	97	43.548	Heterocephalus_glaber_female
ENSAOCG00000006616	ptcd2	93	43.548	ENSHGLG00100015419	PTCD2	97	43.548	Heterocephalus_glaber_male
ENSAOCG00000006616	ptcd2	98	65.195	ENSHCOG00000001703	ptcd2	100	65.195	Hippocampus_comes
ENSAOCG00000006616	ptcd2	94	56.676	ENSIPUG00000006080	ptcd2	99	56.658	Ictalurus_punctatus
ENSAOCG00000006616	ptcd2	89	45.845	ENSSTOG00000006596	PTCD2	91	45.845	Ictidomys_tridecemlineatus
ENSAOCG00000006616	ptcd2	89	47.414	ENSJJAG00000024388	Ptcd2	91	47.414	Jaculus_jaculus
ENSAOCG00000006616	ptcd2	98	64.737	ENSKMAG00000009329	ptcd2	99	64.737	Kryptolebias_marmoratus
ENSAOCG00000006616	ptcd2	100	71.392	ENSLBEG00000024871	ptcd2	99	71.392	Labrus_bergylta
ENSAOCG00000006616	ptcd2	98	55.208	ENSLOCG00000011122	ptcd2	100	55.208	Lepisosteus_oculatus
ENSAOCG00000006616	ptcd2	71	51.273	ENSLAFG00000004115	PTCD2	93	50.173	Loxodonta_africana
ENSAOCG00000006616	ptcd2	96	47.200	ENSMFAG00000031516	PTCD2	96	47.200	Macaca_fascicularis
ENSAOCG00000006616	ptcd2	96	46.667	ENSMNEG00000007537	PTCD2	98	46.667	Macaca_nemestrina
ENSAOCG00000006616	ptcd2	96	46.667	ENSMLEG00000031093	PTCD2	96	46.667	Mandrillus_leucophaeus
ENSAOCG00000006616	ptcd2	98	74.278	ENSMAMG00000018529	ptcd2	100	74.278	Mastacembelus_armatus
ENSAOCG00000006616	ptcd2	100	81.443	ENSMZEG00005003625	ptcd2	100	81.443	Maylandia_zebra
ENSAOCG00000006616	ptcd2	89	45.977	ENSMGAG00000005033	PTCD2	100	45.977	Meleagris_gallopavo
ENSAOCG00000006616	ptcd2	66	42.391	ENSMAUG00000020253	Ptcd2	96	37.330	Mesocricetus_auratus
ENSAOCG00000006616	ptcd2	95	44.855	ENSMICG00000004535	PTCD2	98	44.855	Microcebus_murinus
ENSAOCG00000006616	ptcd2	95	44.772	ENSMOCG00000019985	Ptcd2	97	44.772	Microtus_ochrogaster
ENSAOCG00000006616	ptcd2	98	44.792	ENSMODG00000001695	PTCD2	100	44.792	Monodelphis_domestica
ENSAOCG00000006616	ptcd2	98	76.115	ENSMALG00000022372	ptcd2	100	76.115	Monopterus_albus
ENSAOCG00000006616	ptcd2	89	45.690	MGP_CAROLIEiJ_G0018829	Ptcd2	91	45.690	Mus_caroli
ENSAOCG00000006616	ptcd2	89	45.402	ENSMUSG00000021650	Ptcd2	91	45.402	Mus_musculus
ENSAOCG00000006616	ptcd2	89	47.126	MGP_PahariEiJ_G0015904	Ptcd2	91	47.126	Mus_pahari
ENSAOCG00000006616	ptcd2	89	46.264	MGP_SPRETEiJ_G0019711	Ptcd2	91	46.264	Mus_spretus
ENSAOCG00000006616	ptcd2	89	46.839	ENSMPUG00000014401	PTCD2	91	46.839	Mustela_putorius_furo
ENSAOCG00000006616	ptcd2	89	46.552	ENSMLUG00000007374	PTCD2	90	46.552	Myotis_lucifugus
ENSAOCG00000006616	ptcd2	93	43.597	ENSNGAG00000005027	Ptcd2	95	43.597	Nannospalax_galili
ENSAOCG00000006616	ptcd2	98	80.840	ENSNBRG00000008174	ptcd2	100	80.840	Neolamprologus_brichardi
ENSAOCG00000006616	ptcd2	85	75.988	ENSNBRG00000000092	-	100	75.988	Neolamprologus_brichardi
ENSAOCG00000006616	ptcd2	93	45.479	ENSNLEG00000004516	PTCD2	94	45.479	Nomascus_leucogenys
ENSAOCG00000006616	ptcd2	59	57.669	ENSMEUG00000014012	-	63	54.545	Notamacropus_eugenii
ENSAOCG00000006616	ptcd2	89	45.977	ENSOPRG00000007290	PTCD2	90	45.977	Ochotona_princeps
ENSAOCG00000006616	ptcd2	91	46.197	ENSODEG00000016417	PTCD2	93	46.197	Octodon_degus
ENSAOCG00000006616	ptcd2	86	80.838	ENSONIG00000011269	ptcd2	98	80.838	Oreochromis_niloticus
ENSAOCG00000006616	ptcd2	89	45.977	ENSOCUG00000007970	PTCD2	91	45.977	Oryctolagus_cuniculus
ENSAOCG00000006616	ptcd2	100	72.308	ENSORLG00000003851	ptcd2	100	72.308	Oryzias_latipes
ENSAOCG00000006616	ptcd2	98	71.279	ENSORLG00020009823	ptcd2	100	71.279	Oryzias_latipes_hni
ENSAOCG00000006616	ptcd2	89	70.145	ENSORLG00015016777	ptcd2	99	70.145	Oryzias_latipes_hsok
ENSAOCG00000006616	ptcd2	100	71.026	ENSOMEG00000012396	ptcd2	95	71.026	Oryzias_melastigma
ENSAOCG00000006616	ptcd2	89	47.414	ENSOGAG00000008390	PTCD2	90	47.414	Otolemur_garnettii
ENSAOCG00000006616	ptcd2	89	47.414	ENSOARG00000005087	PTCD2	89	47.414	Ovis_aries
ENSAOCG00000006616	ptcd2	93	45.753	ENSPPAG00000028480	PTCD2	94	45.753	Pan_paniscus
ENSAOCG00000006616	ptcd2	93	45.205	ENSPTRG00000016968	PTCD2	94	45.205	Pan_troglodytes
ENSAOCG00000006616	ptcd2	89	47.826	ENSPANG00000006611	PTCD2	89	47.826	Papio_anubis
ENSAOCG00000006616	ptcd2	98	53.906	ENSPKIG00000019896	ptcd2	100	53.906	Paramormyrops_kingsleyae
ENSAOCG00000006616	ptcd2	80	50.641	ENSPSIG00000014559	PTCD2	97	50.641	Pelodiscus_sinensis
ENSAOCG00000006616	ptcd2	95	45.600	ENSPEMG00000000884	Ptcd2	97	45.600	Peromyscus_maniculatus_bairdii
ENSAOCG00000006616	ptcd2	91	48.034	ENSPCIG00000029047	PTCD2	92	48.034	Phascolarctos_cinereus
ENSAOCG00000006616	ptcd2	98	75.263	ENSPLAG00000010456	ptcd2	99	75.263	Poecilia_latipinna
ENSAOCG00000006616	ptcd2	98	75.789	ENSPREG00000021797	ptcd2	97	75.789	Poecilia_reticulata
ENSAOCG00000006616	ptcd2	96	40.267	ENSPPYG00000015543	PTCD2	96	40.267	Pongo_abelii
ENSAOCG00000006616	ptcd2	71	43.431	ENSPCAG00000006806	PTCD2	87	43.431	Procavia_capensis
ENSAOCG00000006616	ptcd2	90	47.143	ENSPVAG00000010935	PTCD2	90	47.143	Pteropus_vampyrus
ENSAOCG00000006616	ptcd2	100	81.186	ENSPNYG00000003122	ptcd2	100	81.186	Pundamilia_nyererei
ENSAOCG00000006616	ptcd2	98	63.802	ENSPNAG00000021490	ptcd2	100	63.802	Pygocentrus_nattereri
ENSAOCG00000006616	ptcd2	94	46.216	ENSRNOG00000028403	Ptcd2	97	46.216	Rattus_norvegicus
ENSAOCG00000006616	ptcd2	96	41.333	ENSRBIG00000032929	PTCD2	96	41.333	Rhinopithecus_bieti
ENSAOCG00000006616	ptcd2	96	45.600	ENSRROG00000000080	PTCD2	98	45.600	Rhinopithecus_roxellana
ENSAOCG00000006616	ptcd2	96	45.093	ENSSBOG00000018911	PTCD2	98	45.093	Saimiri_boliviensis_boliviensis
ENSAOCG00000006616	ptcd2	96	44.180	ENSSHAG00000003833	PTCD2	98	44.180	Sarcophilus_harrisii
ENSAOCG00000006616	ptcd2	98	53.385	ENSSFOG00015015415	ptcd2	100	53.385	Scleropages_formosus
ENSAOCG00000006616	ptcd2	98	67.013	ENSSMAG00000010350	ptcd2	100	67.013	Scophthalmus_maximus
ENSAOCG00000006616	ptcd2	100	76.546	ENSSDUG00000008142	ptcd2	97	76.546	Seriola_dumerili
ENSAOCG00000006616	ptcd2	98	76.378	ENSSLDG00000015284	ptcd2	100	76.378	Seriola_lalandi_dorsalis
ENSAOCG00000006616	ptcd2	97	43.421	ENSSPUG00000000176	PTCD2	95	43.421	Sphenodon_punctatus
ENSAOCG00000006616	ptcd2	100	77.577	ENSSPAG00000008591	ptcd2	100	77.577	Stegastes_partitus
ENSAOCG00000006616	ptcd2	93	46.721	ENSSSCG00000016975	PTCD2	86	46.721	Sus_scrofa
ENSAOCG00000006616	ptcd2	89	46.377	ENSTGUG00000005705	PTCD2	99	46.377	Taeniopygia_guttata
ENSAOCG00000006616	ptcd2	95	42.670	ENSTBEG00000016559	PTCD2	98	42.670	Tupaia_belangeri
ENSAOCG00000006616	ptcd2	89	47.262	ENSTTRG00000011851	PTCD2	89	47.262	Tursiops_truncatus
ENSAOCG00000006616	ptcd2	95	44.652	ENSUAMG00000007583	PTCD2	87	44.652	Ursus_americanus
ENSAOCG00000006616	ptcd2	95	44.892	ENSUMAG00000007666	PTCD2	97	44.892	Ursus_maritimus
ENSAOCG00000006616	ptcd2	89	45.402	ENSVPAG00000009597	PTCD2	89	45.402	Vicugna_pacos
ENSAOCG00000006616	ptcd2	89	47.414	ENSVVUG00000007299	-	97	43.220	Vulpes_vulpes
ENSAOCG00000006616	ptcd2	89	47.126	ENSXETG00000031652	PTCD2	91	47.126	Xenopus_tropicalis
ENSAOCG00000006616	ptcd2	99	73.265	ENSXMAG00000005940	ptcd2	92	73.265	Xiphophorus_maculatus