EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000006744 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 8804 bases
Position: chrNXFZ01003211.1:85188-93991
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003451	zf-C2H2	PF00096.26	4.2e-22	1	4
ENSAOCP00000003451	zf-C2H2	PF00096.26	4.2e-22	2	4
ENSAOCP00000003451	zf-C2H2	PF00096.26	4.2e-22	3	4
ENSAOCP00000003451	zf-C2H2	PF00096.26	4.2e-22	4	4
ENSAOCP00000003451	zf-met	PF12874.7	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009753	-	504	-	ENSAOCP00000003451	167 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000006744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000006744	-	95	39.560	ENSAOCG00000016737	-	95	49.091
ENSAOCG00000006744	-	53	36.364	ENSAOCG00000007347	-	58	40.000
ENSAOCG00000006744	-	75	35.652	ENSAOCG00000002430	-	81	35.652
ENSAOCG00000006744	-	90	32.479	ENSAOCG00000014165	-	79	34.177
ENSAOCG00000006744	-	71	36.134	ENSAOCG00000017602	-	65	36.134
ENSAOCG00000006744	-	84	38.843	ENSAOCG00000022459	-	90	41.026
ENSAOCG00000006744	-	84	32.787	ENSAOCG00000024275	GZF1	51	32.787
ENSAOCG00000006744	-	71	37.288	ENSAOCG00000013130	-	76	37.288
ENSAOCG00000006744	-	83	36.441	ENSAOCG00000004564	-	84	36.441
ENSAOCG00000006744	-	78	36.975	ENSAOCG00000003494	si:dkey-7i4.5	76	36.975
ENSAOCG00000006744	-	91	36.364	ENSAOCG00000016905	-	62	36.364
ENSAOCG00000006744	-	86	37.288	ENSAOCG00000020830	-	90	37.288
ENSAOCG00000006744	-	77	38.272	ENSAOCG00000017595	-	56	34.454
ENSAOCG00000006744	-	84	34.343	ENSAOCG00000016088	-	86	34.343
ENSAOCG00000006744	-	91	34.746	ENSAOCG00000022375	-	90	35.043
ENSAOCG00000006744	-	81	43.636	ENSAOCG00000006793	-	76	43.636
ENSAOCG00000006744	-	78	42.254	ENSAOCG00000012653	-	83	37.864
ENSAOCG00000006744	-	83	35.537	ENSAOCG00000004559	-	89	35.537
ENSAOCG00000006744	-	69	35.780	ENSAOCG00000018579	-	59	35.780
ENSAOCG00000006744	-	77	30.769	ENSAOCG00000007134	-	78	34.615
ENSAOCG00000006744	-	75	36.975	ENSAOCG00000022283	-	83	36.975
ENSAOCG00000006744	-	71	36.842	ENSAOCG00000024281	-	88	36.842
ENSAOCG00000006744	-	90	32.773	ENSAOCG00000015987	-	54	32.773
ENSAOCG00000006744	-	79	34.454	ENSAOCG00000019475	-	62	34.454
ENSAOCG00000006744	-	77	41.791	ENSAOCG00000016409	-	63	41.791
ENSAOCG00000006744	-	71	35.593	ENSAOCG00000002585	-	63	35.593
ENSAOCG00000006744	-	84	32.500	ENSAOCG00000014651	-	50	35.294
ENSAOCG00000006744	-	74	34.409	ENSAOCG00000007388	-	53	34.746
ENSAOCG00000006744	-	69	30.172	ENSAOCG00000017968	snai2	52	30.172
ENSAOCG00000006744	-	71	35.043	ENSAOCG00000021187	gfi1b	50	35.043
ENSAOCG00000006744	-	77	37.069	ENSAOCG00000012903	-	71	37.069
ENSAOCG00000006744	-	95	36.634	ENSAOCG00000013710	-	82	36.634
ENSAOCG00000006744	-	89	32.031	ENSAOCG00000008304	zbtb48	53	32.031
ENSAOCG00000006744	-	84	41.270	ENSAOCG00000000570	-	64	41.270
ENSAOCG00000006744	-	84	36.441	ENSAOCG00000013672	-	90	34.746
ENSAOCG00000006744	-	89	35.593	ENSAOCG00000001341	-	86	35.593
ENSAOCG00000006744	-	86	37.288	ENSAOCG00000018484	-	90	38.136
ENSAOCG00000006744	-	83	35.593	ENSAOCG00000010471	-	67	35.294
ENSAOCG00000006744	-	90	35.593	ENSAOCG00000022276	-	93	36.752
ENSAOCG00000006744	-	71	31.092	ENSAOCG00000013589	-	88	31.092
ENSAOCG00000006744	-	94	35.652	ENSAOCG00000007045	-	83	35.652
ENSAOCG00000006744	-	82	38.462	ENSAOCG00000015586	-	90	36.441
ENSAOCG00000006744	-	79	30.233	ENSAOCG00000003910	scrt1b	50	30.233
ENSAOCG00000006744	-	86	36.441	ENSAOCG00000016287	-	63	36.441
ENSAOCG00000006744	-	90	38.136	ENSAOCG00000003277	-	78	38.136
ENSAOCG00000006744	-	77	40.789	ENSAOCG00000000448	-	94	40.789
ENSAOCG00000006744	-	83	35.246	ENSAOCG00000013124	-	59	35.246
ENSAOCG00000006744	-	82	33.613	ENSAOCG00000010498	-	52	33.613
ENSAOCG00000006744	-	87	37.815	ENSAOCG00000016897	-	64	37.815
ENSAOCG00000006744	-	86	39.623	ENSAOCG00000018307	-	90	36.752
ENSAOCG00000006744	-	81	34.167	ENSAOCG00000022079	-	71	34.167
ENSAOCG00000006744	-	95	31.783	ENSAOCG00000013578	-	74	32.203
ENSAOCG00000006744	-	89	45.833	ENSAOCG00000015369	-	100	37.607
ENSAOCG00000006744	-	87	35.577	ENSAOCG00000022675	-	98	36.441
ENSAOCG00000006744	-	83	39.286	ENSAOCG00000001325	-	65	42.553
ENSAOCG00000006744	-	75	37.815	ENSAOCG00000001327	-	77	37.815
ENSAOCG00000006744	-	74	36.667	ENSAOCG00000001615	-	80	36.667
ENSAOCG00000006744	-	72	36.559	ENSAOCG00000018543	-	68	36.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006744	-	98	70.918	ENSAPOG00000012437	-	98	70.918	Acanthochromis_polyacanthus
ENSAOCG00000006744	-	81	37.097	ENSAPOG00000019138	-	58	37.097	Acanthochromis_polyacanthus
ENSAOCG00000006744	-	84	40.385	ENSACIG00000007464	-	54	40.385	Amphilophus_citrinellus
ENSAOCG00000006744	-	78	35.238	ENSACIG00000017892	-	82	35.238	Amphilophus_citrinellus
ENSAOCG00000006744	-	88	80.000	ENSAPEG00000015714	-	79	73.481	Amphiprion_percula
ENSAOCG00000006744	-	89	32.000	ENSAPEG00000010013	-	61	32.000	Amphiprion_percula
ENSAOCG00000006744	-	88	37.815	ENSAPEG00000001556	-	64	37.815	Amphiprion_percula
ENSAOCG00000006744	-	90	36.667	ENSATEG00000018931	-	77	36.667	Anabas_testudineus
ENSAOCG00000006744	-	83	36.508	ENSAMXG00000029518	-	51	36.508	Astyanax_mexicanus
ENSAOCG00000006744	-	71	38.384	ENSCING00000002128	zf(c2h2)-35	51	38.384	Ciona_intestinalis
ENSAOCG00000006744	-	81	35.398	ENSCSEG00000010453	-	59	35.398	Cynoglossus_semilaevis
ENSAOCG00000006744	-	84	36.066	ENSCSEG00000008525	-	50	36.066	Cynoglossus_semilaevis
ENSAOCG00000006744	-	60	43.902	ENSCSEG00000015593	-	72	43.902	Cynoglossus_semilaevis
ENSAOCG00000006744	-	90	37.079	ENSCVAG00000003250	-	59	37.313	Cyprinodon_variegatus
ENSAOCG00000006744	-	58	36.082	ENSCVAG00000020141	-	57	36.082	Cyprinodon_variegatus
ENSAOCG00000006744	-	72	31.522	ENSCVAG00000015616	-	74	31.522	Cyprinodon_variegatus
ENSAOCG00000006744	-	95	30.065	ENSELUG00000001909	-	73	30.935	Esox_lucius
ENSAOCG00000006744	-	79	38.983	ENSELUG00000024007	-	58	32.824	Esox_lucius
ENSAOCG00000006744	-	80	34.188	ENSGAFG00000008204	-	66	34.188	Gambusia_affinis
ENSAOCG00000006744	-	81	33.058	ENSGAFG00000001879	-	63	33.058	Gambusia_affinis
ENSAOCG00000006744	-	80	36.975	ENSHCOG00000013489	-	88	36.975	Hippocampus_comes
ENSAOCG00000006744	-	77	34.444	ENSHCOG00000008550	-	52	32.759	Hippocampus_comes
ENSAOCG00000006744	-	96	31.538	ENSHCOG00000015497	-	91	31.538	Hippocampus_comes
ENSAOCG00000006744	-	77	34.444	ENSHCOG00000001873	-	52	32.759	Hippocampus_comes
ENSAOCG00000006744	-	78	32.381	ENSKMAG00000007699	-	64	32.381	Kryptolebias_marmoratus
ENSAOCG00000006744	-	88	59.223	ENSKMAG00000014184	-	56	59.223	Kryptolebias_marmoratus
ENSAOCG00000006744	-	84	44.231	ENSLBEG00000001132	-	57	37.391	Labrus_bergylta
ENSAOCG00000006744	-	74	31.429	ENSLBEG00000017424	-	90	31.429	Labrus_bergylta
ENSAOCG00000006744	-	90	30.968	ENSLBEG00000007106	-	62	34.940	Labrus_bergylta
ENSAOCG00000006744	-	71	31.579	ENSLBEG00000006161	-	57	31.579	Labrus_bergylta
ENSAOCG00000006744	-	92	36.134	ENSLOCG00000004208	-	93	36.134	Lepisosteus_oculatus
ENSAOCG00000006744	-	95	39.326	ENSMAMG00000017939	-	65	39.326	Mastacembelus_armatus
ENSAOCG00000006744	-	87	33.043	ENSMZEG00005013907	-	76	33.043	Maylandia_zebra
ENSAOCG00000006744	-	71	38.889	ENSMALG00000004279	-	75	38.889	Monopterus_albus
ENSAOCG00000006744	-	90	33.043	ENSONIG00000007967	-	53	33.043	Oreochromis_niloticus
ENSAOCG00000006744	-	68	48.092	ENSORLG00000028711	-	68	48.092	Oryzias_latipes
ENSAOCG00000006744	-	87	37.069	ENSORLG00000002268	-	58	37.069	Oryzias_latipes
ENSAOCG00000006744	-	74	33.898	ENSORLG00000021885	-	59	33.898	Oryzias_latipes
ENSAOCG00000006744	-	87	33.628	ENSORLG00020019227	-	62	33.051	Oryzias_latipes_hni
ENSAOCG00000006744	-	78	33.898	ENSORLG00020018921	-	67	33.898	Oryzias_latipes_hni
ENSAOCG00000006744	-	87	33.051	ENSORLG00015018099	-	79	33.051	Oryzias_latipes_hsok
ENSAOCG00000006744	-	78	32.558	ENSOMEG00000005578	-	71	32.558	Oryzias_melastigma
ENSAOCG00000006744	-	71	37.647	ENSPMGG00000006928	-	50	37.647	Periophthalmus_magnuspinnatus
ENSAOCG00000006744	-	77	42.169	ENSPMGG00000002455	-	69	42.169	Periophthalmus_magnuspinnatus
ENSAOCG00000006744	-	71	35.593	ENSPMGG00000002659	-	68	33.577	Periophthalmus_magnuspinnatus
ENSAOCG00000006744	-	93	33.333	ENSPMGG00000009571	-	61	33.333	Periophthalmus_magnuspinnatus
ENSAOCG00000006744	-	84	30.357	ENSPMGG00000007051	-	53	35.000	Periophthalmus_magnuspinnatus
ENSAOCG00000006744	-	72	31.034	ENSPMAG00000002022	-	68	31.034	Petromyzon_marinus
ENSAOCG00000006744	-	63	34.921	ENSPMAG00000000839	-	92	34.921	Petromyzon_marinus
ENSAOCG00000006744	-	86	36.667	ENSPFOG00000018860	-	89	36.667	Poecilia_formosa
ENSAOCG00000006744	-	88	30.822	ENSPLAG00000014832	-	75	30.822	Poecilia_latipinna
ENSAOCG00000006744	-	81	33.333	ENSPLAG00000008941	-	86	33.333	Poecilia_latipinna
ENSAOCG00000006744	-	88	30.822	ENSPMEG00000005210	-	75	30.822	Poecilia_mexicana
ENSAOCG00000006744	-	71	33.043	ENSPREG00000002603	-	55	33.043	Poecilia_reticulata
ENSAOCG00000006744	-	77	42.188	ENSPNAG00000005946	-	74	44.000	Pygocentrus_nattereri
ENSAOCG00000006744	-	87	36.220	ENSSMAG00000013291	-	87	36.220	Scophthalmus_maximus
ENSAOCG00000006744	-	78	32.836	ENSSLDG00000014436	-	69	32.836	Seriola_lalandi_dorsalis
ENSAOCG00000006744	-	88	31.356	ENSSPAG00000011544	-	55	31.356	Stegastes_partitus
ENSAOCG00000006744	-	78	31.579	ENSSPAG00000011533	-	67	31.579	Stegastes_partitus
ENSAOCG00000006744	-	75	45.833	ENSXETG00000012506	znf91	99	45.833	Xenopus_tropicalis
ENSAOCG00000006744	-	71	34.694	ENSXCOG00000000254	-	58	34.694	Xiphophorus_couchianus
ENSAOCG00000006744	-	71	36.170	ENSXCOG00000020768	-	70	36.170	Xiphophorus_couchianus
ENSAOCG00000006744	-	88	30.822	ENSXMAG00000012936	-	74	30.822	Xiphophorus_maculatus