EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000006786 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 5290 bases
Position: chrNXFZ01001890.1:349745-355034
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003497	zf-CCHC	PF00098.23	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009685	-	1389	-	ENSAOCP00000003497	462 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000006786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000006786	-	100	99.784	ENSAOCG00000022423	-	100	99.784
ENSAOCG00000006786	-	92	33.193	ENSAOCG00000006827	-	87	33.193
ENSAOCG00000006786	-	100	99.784	ENSAOCG00000007145	-	100	99.784
ENSAOCG00000006786	-	92	33.193	ENSAOCG00000006321	-	87	33.193
ENSAOCG00000006786	-	94	92.688	ENSAOCG00000003063	-	100	92.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006786	-	90	59.666	ENSAPOG00000020332	-	92	59.666	Acanthochromis_polyacanthus
ENSAOCG00000006786	-	92	35.104	ENSAPEG00000022462	-	95	35.104	Amphiprion_percula
ENSAOCG00000006786	-	94	94.196	ENSAPEG00000021094	-	65	94.196	Amphiprion_percula
ENSAOCG00000006786	-	80	66.667	ENSACLG00000003667	-	87	66.667	Astatotilapia_calliptera
ENSAOCG00000006786	-	78	67.769	ENSACLG00000010385	-	77	67.769	Astatotilapia_calliptera
ENSAOCG00000006786	-	94	67.597	ENSACLG00000021840	-	100	67.597	Astatotilapia_calliptera
ENSAOCG00000006786	-	94	67.735	ENSACLG00000001645	-	98	67.735	Astatotilapia_calliptera
ENSAOCG00000006786	-	63	30.333	ENSCPBG00000008851	-	73	30.333	Chrysemys_picta_bellii
ENSAOCG00000006786	-	94	68.182	ENSMZEG00005020406	-	100	68.182	Maylandia_zebra
ENSAOCG00000006786	-	94	64.163	ENSMZEG00005027320	-	100	64.163	Maylandia_zebra
ENSAOCG00000006786	-	89	33.102	ENSMZEG00005008163	-	93	33.102	Maylandia_zebra
ENSAOCG00000006786	-	94	31.685	ENSMALG00000016043	PNMA5	93	31.685	Monopterus_albus
ENSAOCG00000006786	-	61	30.671	ENSORLG00000027063	-	57	30.671	Oryzias_latipes
ENSAOCG00000006786	-	59	46.014	ENSPKIG00000019666	-	61	46.014	Paramormyrops_kingsleyae
ENSAOCG00000006786	-	54	34.962	ENSPSIG00000014432	-	96	34.962	Pelodiscus_sinensis
ENSAOCG00000006786	-	91	31.405	ENSPFOG00000023145	-	84	31.546	Poecilia_formosa
ENSAOCG00000006786	-	95	32.704	ENSPNAG00000005461	-	97	32.704	Pygocentrus_nattereri
ENSAOCG00000006786	-	71	31.928	ENSPNAG00000011953	-	65	31.928	Pygocentrus_nattereri
ENSAOCG00000006786	-	96	30.526	ENSPNAG00000021284	-	99	30.526	Pygocentrus_nattereri
ENSAOCG00000006786	-	73	31.977	ENSPNAG00000000816	-	74	31.977	Pygocentrus_nattereri
ENSAOCG00000006786	-	58	30.117	ENSPNAG00000008260	-	58	30.117	Pygocentrus_nattereri
ENSAOCG00000006786	-	61	45.921	ENSSFOG00015018996	-	88	45.921	Scleropages_formosus
ENSAOCG00000006786	-	91	74.224	ENSSDUG00000013172	-	96	74.224	Seriola_dumerili
ENSAOCG00000006786	-	94	72.603	ENSSLDG00000012064	-	100	72.603	Seriola_lalandi_dorsalis
ENSAOCG00000006786	-	94	65.236	ENSSPAG00000003097	-	100	65.236	Stegastes_partitus
ENSAOCG00000006786	-	91	32.727	ENSXMAG00000022751	-	95	32.727	Xiphophorus_maculatus
ENSAOCG00000006786	-	76	34.366	ENSXMAG00000025862	-	58	34.366	Xiphophorus_maculatus