EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000006827 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 6403 bases
Position: chrNXFZ01006324.1:725531-731933
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003530	zf-CCHC	PF00098.23	0.00036	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009619	-	1626	-	ENSAOCP00000003530	541 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000006827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000006827	-	87	33.747	ENSAOCG00000003063	-	98	33.747
ENSAOCG00000006827	-	87	33.403	ENSAOCG00000022423	-	92	33.403
ENSAOCG00000006827	-	87	33.403	ENSAOCG00000007145	-	92	33.403
ENSAOCG00000006827	-	87	33.193	ENSAOCG00000006786	-	92	33.193
ENSAOCG00000006827	-	100	99.815	ENSAOCG00000006321	-	100	99.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006827	-	81	32.658	ENSAPOG00000020332	-	87	32.432	Acanthochromis_polyacanthus
ENSAOCG00000006827	-	89	88.750	ENSAPEG00000022462	-	97	88.542	Amphiprion_percula
ENSAOCG00000006827	-	87	33.128	ENSAPEG00000021094	-	63	33.128	Amphiprion_percula
ENSAOCG00000006827	-	56	32.710	ENSACLG00000020274	-	60	32.710	Astatotilapia_calliptera
ENSAOCG00000006827	-	87	33.402	ENSACLG00000001645	-	96	33.402	Astatotilapia_calliptera
ENSAOCG00000006827	-	72	33.163	ENSACLG00000010385	-	73	33.163	Astatotilapia_calliptera
ENSAOCG00000006827	-	79	34.382	ENSACLG00000003667	-	91	34.382	Astatotilapia_calliptera
ENSAOCG00000006827	-	87	34.232	ENSACLG00000021840	-	98	34.232	Astatotilapia_calliptera
ENSAOCG00000006827	-	86	48.833	ENSAMXG00000043621	-	67	48.833	Astyanax_mexicanus
ENSAOCG00000006827	-	63	33.333	ENSCPBG00000008851	-	85	33.333	Chrysemys_picta_bellii
ENSAOCG00000006827	-	91	41.954	ENSFHEG00000016127	-	92	41.954	Fundulus_heteroclitus
ENSAOCG00000006827	-	90	58.203	ENSGAFG00000002139	-	73	58.203	Gambusia_affinis
ENSAOCG00000006827	-	51	33.333	ENSGAGG00000018180	-	69	33.333	Gopherus_agassizii
ENSAOCG00000006827	-	87	30.977	ENSMZEG00005027320	-	97	30.977	Maylandia_zebra
ENSAOCG00000006827	-	56	32.298	ENSMZEG00005011300	-	86	32.298	Maylandia_zebra
ENSAOCG00000006827	-	84	45.952	ENSMZEG00005008163	-	91	45.952	Maylandia_zebra
ENSAOCG00000006827	-	87	33.610	ENSMZEG00005020406	-	98	33.610	Maylandia_zebra
ENSAOCG00000006827	-	92	52.705	ENSMALG00000016043	PNMA5	97	52.705	Monopterus_albus
ENSAOCG00000006827	-	56	32.508	ENSNBRG00000000277	-	60	32.508	Neolamprologus_brichardi
ENSAOCG00000006827	-	60	30.183	ENSORLG00000027063	-	57	30.183	Oryzias_latipes
ENSAOCG00000006827	-	59	31.776	ENSORLG00020001817	-	88	31.776	Oryzias_latipes_hni
ENSAOCG00000006827	-	54	33.106	ENSPSIG00000014432	-	96	33.106	Pelodiscus_sinensis
ENSAOCG00000006827	-	90	59.180	ENSPFOG00000023145	-	87	59.180	Poecilia_formosa
ENSAOCG00000006827	-	85	44.731	ENSPNAG00000021284	-	96	44.731	Pygocentrus_nattereri
ENSAOCG00000006827	-	86	48.589	ENSPNAG00000011953	-	96	48.589	Pygocentrus_nattereri
ENSAOCG00000006827	-	62	49.853	ENSPNAG00000000816	-	74	49.853	Pygocentrus_nattereri
ENSAOCG00000006827	-	86	47.752	ENSPNAG00000005461	-	95	47.752	Pygocentrus_nattereri
ENSAOCG00000006827	-	65	42.674	ENSPNAG00000008260	-	65	43.523	Pygocentrus_nattereri
ENSAOCG00000006827	-	57	36.810	ENSSFOG00015018996	-	83	36.810	Scleropages_formosus
ENSAOCG00000006827	-	83	32.088	ENSSDUG00000013172	-	93	32.088	Seriola_dumerili
ENSAOCG00000006827	-	87	32.135	ENSSLDG00000012064	-	97	32.135	Seriola_lalandi_dorsalis
ENSAOCG00000006827	-	59	32.353	ENSSPAG00000018468	-	62	32.353	Stegastes_partitus
ENSAOCG00000006827	-	87	32.371	ENSSPAG00000003097	-	98	32.371	Stegastes_partitus
ENSAOCG00000006827	-	88	54.819	ENSXMAG00000022751	-	96	54.819	Xiphophorus_maculatus
ENSAOCG00000006827	-	67	46.995	ENSXMAG00000025862	-	58	46.995	Xiphophorus_maculatus