EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000006855 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 2628 bases
Position: chrNXFZ01003006.1:299317-301944
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003542	RVT_1	PF00078.27	1.6e-19	1	2
ENSAOCP00000003542	RVT_1	PF00078.27	1.6e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009587	-	1110	-	ENSAOCP00000003542	369 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000006855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000006855	-	96	30.075	ENSAOCG00000014605	-	83	30.075
ENSAOCG00000006855	-	98	32.494	ENSAOCG00000012592	-	92	32.494
ENSAOCG00000006855	-	79	30.704	ENSAOCG00000019069	-	96	30.704
ENSAOCG00000006855	-	72	36.585	ENSAOCG00000000894	-	98	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006855	-	66	35.161	ENSAPOG00000015742	-	97	35.161	Acanthochromis_polyacanthus
ENSAOCG00000006855	-	72	30.303	ENSAPOG00000014771	-	76	30.303	Acanthochromis_polyacanthus
ENSAOCG00000006855	-	78	36.923	ENSACIG00000010538	-	75	36.923	Amphilophus_citrinellus
ENSAOCG00000006855	-	57	32.721	ENSACAG00000010816	-	76	32.721	Anolis_carolinensis
ENSAOCG00000006855	-	92	34.577	ENSACLG00000013571	-	99	34.577	Astatotilapia_calliptera
ENSAOCG00000006855	-	55	33.579	ENSACLG00000010837	-	65	33.579	Astatotilapia_calliptera
ENSAOCG00000006855	-	78	33.807	ENSACLG00000012857	-	95	33.807	Astatotilapia_calliptera
ENSAOCG00000006855	-	54	34.457	ENSAMXG00000041014	-	100	34.457	Astyanax_mexicanus
ENSAOCG00000006855	-	67	32.268	ENSAMXG00000040763	-	79	32.268	Astyanax_mexicanus
ENSAOCG00000006855	-	86	34.031	ENSCVAG00000018360	-	92	34.031	Cyprinodon_variegatus
ENSAOCG00000006855	-	85	36.986	ENSHBUG00000007736	-	75	36.986	Haplochromis_burtoni
ENSAOCG00000006855	-	98	32.624	ENSKMAG00000009272	-	52	32.624	Kryptolebias_marmoratus
ENSAOCG00000006855	-	96	32.220	ENSKMAG00000014872	-	50	32.220	Kryptolebias_marmoratus
ENSAOCG00000006855	-	60	45.045	ENSKMAG00000014393	-	52	45.045	Kryptolebias_marmoratus
ENSAOCG00000006855	-	96	32.536	ENSKMAG00000014507	-	54	32.536	Kryptolebias_marmoratus
ENSAOCG00000006855	-	94	31.068	ENSLBEG00000015758	-	61	31.068	Labrus_bergylta
ENSAOCG00000006855	-	67	35.821	ENSLBEG00000020242	-	67	35.821	Labrus_bergylta
ENSAOCG00000006855	-	53	33.333	ENSMZEG00005006211	-	63	33.333	Maylandia_zebra
ENSAOCG00000006855	-	94	32.771	ENSMZEG00005021767	-	51	32.771	Maylandia_zebra
ENSAOCG00000006855	-	93	35.452	ENSMZEG00005011529	-	77	35.452	Maylandia_zebra
ENSAOCG00000006855	-	94	35.366	ENSMZEG00005017030	-	77	35.366	Maylandia_zebra
ENSAOCG00000006855	-	96	33.810	ENSNBRG00000012595	-	95	33.810	Neolamprologus_brichardi
ENSAOCG00000006855	-	82	33.607	ENSNBRG00000000972	-	91	33.607	Neolamprologus_brichardi
ENSAOCG00000006855	-	83	36.364	ENSORLG00000023713	-	95	36.364	Oryzias_latipes
ENSAOCG00000006855	-	99	30.446	ENSORLG00000024464	-	73	30.446	Oryzias_latipes
ENSAOCG00000006855	-	95	30.404	ENSORLG00000028313	-	50	30.404	Oryzias_latipes
ENSAOCG00000006855	-	50	37.297	ENSORLG00000028454	-	58	37.297	Oryzias_latipes
ENSAOCG00000006855	-	52	41.361	ENSORLG00000024236	-	91	31.884	Oryzias_latipes
ENSAOCG00000006855	-	59	34.164	ENSORLG00000028706	-	57	34.164	Oryzias_latipes
ENSAOCG00000006855	-	57	32.482	ENSORLG00020018629	-	72	32.482	Oryzias_latipes_hni
ENSAOCG00000006855	-	92	44.118	ENSORLG00020014626	-	62	44.118	Oryzias_latipes_hni
ENSAOCG00000006855	-	56	37.363	ENSORLG00020022004	-	93	37.363	Oryzias_latipes_hni
ENSAOCG00000006855	-	67	30.312	ENSORLG00020007779	-	85	30.312	Oryzias_latipes_hni
ENSAOCG00000006855	-	52	35.294	ENSORLG00020007002	-	100	35.294	Oryzias_latipes_hni
ENSAOCG00000006855	-	67	30.000	ENSORLG00020010425	-	56	30.000	Oryzias_latipes_hni
ENSAOCG00000006855	-	95	30.166	ENSORLG00020003980	-	51	30.166	Oryzias_latipes_hni
ENSAOCG00000006855	-	57	40.566	ENSORLG00020014149	-	64	40.566	Oryzias_latipes_hni
ENSAOCG00000006855	-	63	75.000	ENSORLG00015000419	-	66	75.000	Oryzias_latipes_hsok
ENSAOCG00000006855	-	61	40.444	ENSORLG00015008227	-	62	40.444	Oryzias_latipes_hsok
ENSAOCG00000006855	-	84	33.067	ENSORLG00015020895	-	99	33.067	Oryzias_latipes_hsok
ENSAOCG00000006855	-	96	54.791	ENSORLG00015021206	-	81	54.722	Oryzias_latipes_hsok
ENSAOCG00000006855	-	58	38.318	ENSORLG00015022393	-	69	38.318	Oryzias_latipes_hsok
ENSAOCG00000006855	-	57	32.482	ENSORLG00015007703	-	70	32.482	Oryzias_latipes_hsok
ENSAOCG00000006855	-	60	37.668	ENSORLG00015021848	-	73	37.668	Oryzias_latipes_hsok
ENSAOCG00000006855	-	60	33.333	ENSOMEG00000013211	-	52	33.333	Oryzias_melastigma
ENSAOCG00000006855	-	50	43.750	ENSPKIG00000013511	-	64	43.750	Paramormyrops_kingsleyae
ENSAOCG00000006855	-	78	33.333	ENSPKIG00000024018	-	97	33.333	Paramormyrops_kingsleyae
ENSAOCG00000006855	-	94	38.983	ENSPMEG00000010792	-	53	38.983	Poecilia_mexicana
ENSAOCG00000006855	-	83	34.347	ENSPREG00000021355	-	92	34.347	Poecilia_reticulata
ENSAOCG00000006855	-	56	30.952	ENSPREG00000004933	-	51	30.952	Poecilia_reticulata
ENSAOCG00000006855	-	64	40.385	ENSPNYG00000002466	-	81	40.385	Pundamilia_nyererei
ENSAOCG00000006855	-	88	31.202	ENSPNAG00000002786	-	95	31.202	Pygocentrus_nattereri
ENSAOCG00000006855	-	63	35.798	ENSPNAG00000010342	-	94	35.798	Pygocentrus_nattereri
ENSAOCG00000006855	-	66	35.065	ENSPNAG00000014375	-	75	35.065	Pygocentrus_nattereri
ENSAOCG00000006855	-	93	33.418	ENSSMAG00000014015	-	84	33.418	Scophthalmus_maximus
ENSAOCG00000006855	-	92	34.605	ENSSLDG00000006955	-	98	34.605	Seriola_lalandi_dorsalis
ENSAOCG00000006855	-	85	33.687	ENSSPUG00000015446	-	84	33.687	Sphenodon_punctatus
ENSAOCG00000006855	-	83	33.784	ENSSPAG00000000151	-	81	33.784	Stegastes_partitus
ENSAOCG00000006855	-	97	38.028	ENSXETG00000032308	-	51	38.028	Xenopus_tropicalis
ENSAOCG00000006855	-	52	48.168	ENSXMAG00000026184	-	64	48.168	Xiphophorus_maculatus