EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000006876 (Gene tree)
Gene ID: 111571414
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 5305 bases
Position: chrNXFZ01002782.1:153594-158898
Accession: 111571414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003581	LSM	PF01423.22	6.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009536	-	1916	XM_023274540	ENSAOCP00000003581	240 (aa)	XP_023130308	UPI000C309D86

Gene Model

Click here to download ENSAOCG00000006876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000006876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000006876	snrpb	69	94.643	ENSG00000125835	SNRPB	74	98.077	Homo_sapiens
ENSAOCG00000006876	snrpb	100	99.583	ENSAPOG00000019606	snrpb	82	99.583	Acanthochromis_polyacanthus
ENSAOCG00000006876	snrpb	69	94.611	ENSAMEG00000011353	SNRPB	74	92.778	Ailuropoda_melanoleuca
ENSAOCG00000006876	snrpb	93	100.000	ENSACIG00000014480	snrpb	99	100.000	Amphilophus_citrinellus
ENSAOCG00000006876	snrpb	100	100.000	ENSAPEG00000021585	snrpb	100	100.000	Amphiprion_percula
ENSAOCG00000006876	snrpb	100	98.750	ENSATEG00000009836	snrpb	100	98.750	Anabas_testudineus
ENSAOCG00000006876	snrpb	66	95.625	ENSACAG00000002053	SNRPB	75	93.064	Anolis_carolinensis
ENSAOCG00000006876	snrpb	69	94.643	ENSANAG00000024443	-	78	92.818	Aotus_nancymaae
ENSAOCG00000006876	snrpb	69	87.500	ENSANAG00000036271	-	73	84.530	Aotus_nancymaae
ENSAOCG00000006876	snrpb	100	99.583	ENSACLG00000014707	snrpb	100	99.583	Astatotilapia_calliptera
ENSAOCG00000006876	snrpb	99	97.479	ENSAMXG00000029434	snrpb	99	97.479	Astyanax_mexicanus
ENSAOCG00000006876	snrpb	85	86.058	ENSBTAG00000001038	SNRPB	78	92.818	Bos_taurus
ENSAOCG00000006876	snrpb	69	94.643	ENSCJAG00000020971	-	78	92.818	Callithrix_jacchus
ENSAOCG00000006876	snrpb	89	84.259	ENSCJAG00000023097	-	75	85.083	Callithrix_jacchus
ENSAOCG00000006876	snrpb	69	94.643	ENSCAFG00000006693	-	78	92.818	Canis_familiaris
ENSAOCG00000006876	snrpb	60	84.247	ENSCAFG00000031109	-	76	80.769	Canis_familiaris
ENSAOCG00000006876	snrpb	69	94.643	ENSCAFG00020016981	-	75	92.818	Canis_lupus_dingo
ENSAOCG00000006876	snrpb	69	94.643	ENSCHIG00000025449	-	78	92.818	Capra_hircus
ENSAOCG00000006876	snrpb	69	94.643	ENSTSYG00000014498	-	78	92.818	Carlito_syrichta
ENSAOCG00000006876	snrpb	96	66.379	ENSTSYG00000032303	-	65	72.626	Carlito_syrichta
ENSAOCG00000006876	snrpb	69	94.611	ENSCAPG00000012669	SNRPB	78	92.778	Cavia_aperea
ENSAOCG00000006876	snrpb	69	94.643	ENSCPOG00000039408	SNRPB	78	92.818	Cavia_porcellus
ENSAOCG00000006876	snrpb	69	94.643	ENSCCAG00000026002	SNRPB	78	92.818	Cebus_capucinus
ENSAOCG00000006876	snrpb	53	83.465	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSAOCG00000006876	snrpb	69	94.643	ENSCATG00000030230	SNRPB	78	92.818	Cercocebus_atys
ENSAOCG00000006876	snrpb	69	94.643	ENSCLAG00000012442	SNRPB	76	92.818	Chinchilla_lanigera
ENSAOCG00000006876	snrpb	69	94.643	ENSCSAG00000010840	SNRPB	78	92.818	Chlorocebus_sabaeus
ENSAOCG00000006876	snrpb	69	96.429	ENSCPBG00000026801	SNRPB	79	93.923	Chrysemys_picta_bellii
ENSAOCG00000006876	snrpb	69	94.643	ENSCANG00000019461	SNRPB	78	92.818	Colobus_angolensis_palliatus
ENSAOCG00000006876	snrpb	69	94.643	ENSCGRG00001023046	Snrpb	78	92.818	Cricetulus_griseus_chok1gshd
ENSAOCG00000006876	snrpb	67	94.479	ENSCGRG00000010423	Snrpb	77	92.486	Cricetulus_griseus_crigri
ENSAOCG00000006876	snrpb	100	97.917	ENSCSEG00000020328	snrpb	100	97.917	Cynoglossus_semilaevis
ENSAOCG00000006876	snrpb	100	97.510	ENSDARG00000011125	snrpb	100	97.510	Danio_rerio
ENSAOCG00000006876	snrpb	69	88.690	ENSDNOG00000007896	-	74	86.188	Dasypus_novemcinctus
ENSAOCG00000006876	snrpb	69	94.643	ENSDNOG00000015545	-	75	92.818	Dasypus_novemcinctus
ENSAOCG00000006876	snrpb	67	94.444	ENSDORG00000029558	Snrpb	76	92.571	Dipodomys_ordii
ENSAOCG00000006876	snrpb	77	62.437	FBgn0262601	SmB	74	69.128	Drosophila_melanogaster
ENSAOCG00000006876	snrpb	69	73.810	ENSETEG00000006830	SNRPB	79	72.376	Echinops_telfairi
ENSAOCG00000006876	snrpb	76	79.235	ENSEBUG00000007467	SNRPB	62	87.919	Eptatretus_burgeri
ENSAOCG00000006876	snrpb	69	94.048	ENSEASG00005012991	SNRPB	78	92.265	Equus_asinus_asinus
ENSAOCG00000006876	snrpb	69	94.643	ENSECAG00000011944	SNRPB	78	92.818	Equus_caballus
ENSAOCG00000006876	snrpb	69	94.643	ENSEEUG00000015568	SNRPB	64	92.818	Erinaceus_europaeus
ENSAOCG00000006876	snrpb	99	97.468	ENSELUG00000014564	snrpb	99	97.468	Esox_lucius
ENSAOCG00000006876	snrpb	69	94.643	ENSFCAG00000034090	-	78	92.818	Felis_catus
ENSAOCG00000006876	snrpb	66	96.250	ENSFALG00000004866	SNRPB	73	94.083	Ficedula_albicollis
ENSAOCG00000006876	snrpb	69	94.643	ENSFDAG00000009937	SNRPB	78	92.818	Fukomys_damarensis
ENSAOCG00000006876	snrpb	69	96.429	ENSGALG00000035421	SNRPN	74	94.350	Gallus_gallus
ENSAOCG00000006876	snrpb	94	98.230	ENSGAFG00000019558	snrpb	99	98.230	Gambusia_affinis
ENSAOCG00000006876	snrpb	100	97.917	ENSGACG00000003262	snrpb	100	97.917	Gasterosteus_aculeatus
ENSAOCG00000006876	snrpb	69	96.429	ENSGAGG00000001308	SNRPB	75	93.923	Gopherus_agassizii
ENSAOCG00000006876	snrpb	69	94.643	ENSGGOG00000016138	SNRPB	78	92.818	Gorilla_gorilla
ENSAOCG00000006876	snrpb	100	99.583	ENSHBUG00000008369	snrpb	100	99.583	Haplochromis_burtoni
ENSAOCG00000006876	snrpb	69	94.643	ENSHGLG00000016241	-	78	92.818	Heterocephalus_glaber_female
ENSAOCG00000006876	snrpb	63	86.000	ENSHGLG00000016505	-	84	81.714	Heterocephalus_glaber_female
ENSAOCG00000006876	snrpb	69	94.643	ENSHGLG00100012877	-	78	92.818	Heterocephalus_glaber_male
ENSAOCG00000006876	snrpb	63	86.000	ENSHGLG00100004178	-	84	81.714	Heterocephalus_glaber_male
ENSAOCG00000006876	snrpb	100	99.167	ENSHCOG00000014888	snrpb	100	99.167	Hippocampus_comes
ENSAOCG00000006876	snrpb	99	97.059	ENSIPUG00000024569	SNRPB	99	97.059	Ictalurus_punctatus
ENSAOCG00000006876	snrpb	93	63.964	ENSSTOG00000027821	-	62	94.853	Ictidomys_tridecemlineatus
ENSAOCG00000006876	snrpb	69	92.857	ENSSTOG00000033664	-	75	91.160	Ictidomys_tridecemlineatus
ENSAOCG00000006876	snrpb	69	94.643	ENSJJAG00000024170	Snrpb	78	92.818	Jaculus_jaculus
ENSAOCG00000006876	snrpb	95	98.684	ENSKMAG00000014494	snrpb	93	98.684	Kryptolebias_marmoratus
ENSAOCG00000006876	snrpb	100	98.750	ENSLBEG00000005678	snrpb	100	98.750	Labrus_bergylta
ENSAOCG00000006876	snrpb	75	94.536	ENSLACG00000011459	SNRPB	75	93.923	Latimeria_chalumnae
ENSAOCG00000006876	snrpb	99	97.479	ENSLOCG00000002687	snrpb	99	97.479	Lepisosteus_oculatus
ENSAOCG00000006876	snrpb	69	90.419	ENSLAFG00000017588	SNRPB	77	88.889	Loxodonta_africana
ENSAOCG00000006876	snrpb	69	94.643	ENSMFAG00000038756	SNRPB	78	92.818	Macaca_fascicularis
ENSAOCG00000006876	snrpb	69	94.643	ENSMMUG00000010050	SNRPB	78	92.818	Macaca_mulatta
ENSAOCG00000006876	snrpb	69	94.643	ENSMNEG00000027954	SNRPB	78	92.818	Macaca_nemestrina
ENSAOCG00000006876	snrpb	69	94.643	ENSMLEG00000022346	SNRPB	78	92.818	Mandrillus_leucophaeus
ENSAOCG00000006876	snrpb	99	99.582	ENSMAMG00000009294	snrpb	97	99.582	Mastacembelus_armatus
ENSAOCG00000006876	snrpb	100	99.583	ENSMZEG00005011856	snrpb	100	99.583	Maylandia_zebra
ENSAOCG00000006876	snrpb	69	94.643	ENSMICG00000016519	SNRPB	78	92.818	Microcebus_murinus
ENSAOCG00000006876	snrpb	74	83.978	ENSMICG00000015983	-	83	82.320	Microcebus_murinus
ENSAOCG00000006876	snrpb	58	78.417	ENSMOCG00000021362	-	75	74.860	Microtus_ochrogaster
ENSAOCG00000006876	snrpb	69	94.048	ENSMOCG00000002892	-	78	92.265	Microtus_ochrogaster
ENSAOCG00000006876	snrpb	95	99.119	ENSMMOG00000013226	snrpb	97	99.119	Mola_mola
ENSAOCG00000006876	snrpb	100	98.750	ENSMALG00000020839	snrpb	81	98.750	Monopterus_albus
ENSAOCG00000006876	snrpb	69	94.643	MGP_CAROLIEiJ_G0024293	Snrpb	74	98.077	Mus_caroli
ENSAOCG00000006876	snrpb	69	94.643	ENSMUSG00000027404	Snrpb	74	98.077	Mus_musculus
ENSAOCG00000006876	snrpb	69	94.643	MGP_PahariEiJ_G0025738	Snrpb	74	98.077	Mus_pahari
ENSAOCG00000006876	snrpb	69	94.643	MGP_SPRETEiJ_G0025213	Snrpb	73	98.077	Mus_spretus
ENSAOCG00000006876	snrpb	69	94.643	ENSMPUG00000009283	SNRPB	78	92.818	Mustela_putorius_furo
ENSAOCG00000006876	snrpb	69	91.071	ENSMLUG00000016951	SNRPB	75	89.503	Myotis_lucifugus
ENSAOCG00000006876	snrpb	69	94.643	ENSNGAG00000012051	Snrpb	78	92.818	Nannospalax_galili
ENSAOCG00000006876	snrpb	95	97.807	ENSNBRG00000006353	snrpb	87	97.807	Neolamprologus_brichardi
ENSAOCG00000006876	snrpb	69	94.643	ENSNLEG00000029067	SNRPB	76	92.778	Nomascus_leucogenys
ENSAOCG00000006876	snrpb	69	94.611	ENSMEUG00000015625	SNRPB	80	92.778	Notamacropus_eugenii
ENSAOCG00000006876	snrpb	69	89.286	ENSODEG00000016060	-	76	87.845	Octodon_degus
ENSAOCG00000006876	snrpb	69	94.643	ENSODEG00000004305	-	78	92.818	Octodon_degus
ENSAOCG00000006876	snrpb	100	99.583	ENSONIG00000000248	snrpb	100	99.583	Oreochromis_niloticus
ENSAOCG00000006876	snrpb	69	92.262	ENSOCUG00000028215	-	75	90.608	Oryctolagus_cuniculus
ENSAOCG00000006876	snrpb	69	94.643	ENSOCUG00000014042	-	75	92.818	Oryctolagus_cuniculus
ENSAOCG00000006876	snrpb	73	88.827	ENSOCUG00000022423	-	92	86.592	Oryctolagus_cuniculus
ENSAOCG00000006876	snrpb	88	64.953	ENSOCUG00000026813	-	77	63.483	Oryctolagus_cuniculus
ENSAOCG00000006876	snrpb	89	87.558	ENSOCUG00000021456	-	75	88.950	Oryctolagus_cuniculus
ENSAOCG00000006876	snrpb	100	98.750	ENSORLG00000021862	snrpb	100	98.750	Oryzias_latipes
ENSAOCG00000006876	snrpb	69	94.643	ENSOGAG00000016149	SNRPB	75	92.818	Otolemur_garnettii
ENSAOCG00000006876	snrpb	69	94.643	ENSOARG00000006740	SNRPB	78	92.818	Ovis_aries
ENSAOCG00000006876	snrpb	69	94.643	ENSPPAG00000036314	SNRPB	78	92.818	Pan_paniscus
ENSAOCG00000006876	snrpb	69	94.643	ENSPPRG00000003233	-	78	92.818	Panthera_pardus
ENSAOCG00000006876	snrpb	69	94.611	ENSPTIG00000007468	SNRPB	78	92.778	Panthera_tigris_altaica
ENSAOCG00000006876	snrpb	69	94.643	ENSPTRG00000013176	SNRPB	78	92.818	Pan_troglodytes
ENSAOCG00000006876	snrpb	69	94.643	ENSPANG00000020362	SNRPB	75	92.818	Papio_anubis
ENSAOCG00000006876	snrpb	99	96.218	ENSPKIG00000002865	snrpb	99	96.218	Paramormyrops_kingsleyae
ENSAOCG00000006876	snrpb	69	96.407	ENSPSIG00000014125	SNRPB	74	93.889	Pelodiscus_sinensis
ENSAOCG00000006876	snrpb	73	97.714	ENSPMGG00000016349	snrpb	74	97.688	Periophthalmus_magnuspinnatus
ENSAOCG00000006876	snrpb	69	94.643	ENSPEMG00000007948	Snrpb	78	92.818	Peromyscus_maniculatus_bairdii
ENSAOCG00000006876	snrpb	69	94.012	ENSPCIG00000004694	SNRPB	75	92.222	Phascolarctos_cinereus
ENSAOCG00000006876	snrpb	62	100.000	ENSPFOG00000011802	snrpb	63	100.000	Poecilia_formosa
ENSAOCG00000006876	snrpb	89	81.364	ENSPLAG00000014130	snrpb	59	100.000	Poecilia_latipinna
ENSAOCG00000006876	snrpb	89	80.841	ENSPREG00000015515	snrpb	62	100.000	Poecilia_reticulata
ENSAOCG00000006876	snrpb	69	94.643	ENSPPYG00000010841	SNRPB	78	92.818	Pongo_abelii
ENSAOCG00000006876	snrpb	69	94.643	ENSPCOG00000013686	SNRPB	78	92.818	Propithecus_coquereli
ENSAOCG00000006876	snrpb	69	93.452	ENSPVAG00000017013	SNRPB	63	91.713	Pteropus_vampyrus
ENSAOCG00000006876	snrpb	100	99.583	ENSPNYG00000014788	snrpb	100	99.583	Pundamilia_nyererei
ENSAOCG00000006876	snrpb	99	97.059	ENSPNAG00000016126	snrpb	99	97.059	Pygocentrus_nattereri
ENSAOCG00000006876	snrpb	69	94.643	ENSRNOG00000006961	Snrpb	73	98.077	Rattus_norvegicus
ENSAOCG00000006876	snrpb	69	94.643	ENSRBIG00000040505	SNRPB	78	93.333	Rhinopithecus_bieti
ENSAOCG00000006876	snrpb	69	94.643	ENSRROG00000036094	SNRPB	78	92.818	Rhinopithecus_roxellana
ENSAOCG00000006876	snrpb	69	94.643	ENSSBOG00000027310	SNRPB	78	92.818	Saimiri_boliviensis_boliviensis
ENSAOCG00000006876	snrpb	69	95.238	ENSSHAG00000010394	SNRPB	75	93.370	Sarcophilus_harrisii
ENSAOCG00000006876	snrpb	99	95.798	ENSSFOG00015002870	snrpb	99	95.798	Scleropages_formosus
ENSAOCG00000006876	snrpb	100	98.333	ENSSMAG00000006766	snrpb	100	98.333	Scophthalmus_maximus
ENSAOCG00000006876	snrpb	100	99.583	ENSSDUG00000018539	snrpb	100	99.583	Seriola_dumerili
ENSAOCG00000006876	snrpb	100	99.583	ENSSLDG00000022391	snrpb	100	99.583	Seriola_lalandi_dorsalis
ENSAOCG00000006876	snrpb	69	79.042	ENSSARG00000003084	SNRPB	77	78.333	Sorex_araneus
ENSAOCG00000006876	snrpb	69	96.407	ENSSPUG00000015659	SNRPB	75	93.889	Sphenodon_punctatus
ENSAOCG00000006876	snrpb	100	99.583	ENSSPAG00000021992	snrpb	100	99.583	Stegastes_partitus
ENSAOCG00000006876	snrpb	69	94.643	ENSSSCG00000040857	-	78	92.818	Sus_scrofa
ENSAOCG00000006876	snrpb	75	72.131	ENSSSCG00000011966	-	76	69.061	Sus_scrofa
ENSAOCG00000006876	snrpb	70	83.529	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSAOCG00000006876	snrpb	95	98.684	ENSTRUG00000023094	snrpb	99	98.684	Takifugu_rubripes
ENSAOCG00000006876	snrpb	100	98.333	ENSTNIG00000002991	snrpb	100	98.333	Tetraodon_nigroviridis
ENSAOCG00000006876	snrpb	69	94.643	ENSUAMG00000005984	-	87	91.713	Ursus_americanus
ENSAOCG00000006876	snrpb	79	76.190	ENSUMAG00000002123	-	63	94.891	Ursus_maritimus
ENSAOCG00000006876	snrpb	69	94.048	ENSVVUG00000025654	-	75	92.265	Vulpes_vulpes
ENSAOCG00000006876	snrpb	96	72.222	ENSVVUG00000010086	-	95	63.229	Vulpes_vulpes
ENSAOCG00000006876	snrpb	63	98.000	ENSXETG00000027266	snrpb	76	92.818	Xenopus_tropicalis