EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000007093 (Gene tree)
Gene ID: 111581200
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 6654 bases
Position: chrNXFZ01003691.1:290038-296691
Accession: 111581200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003709	zf-met	PF12874.7	3.9e-25	1	4
ENSAOCP00000003709	zf-met	PF12874.7	3.9e-25	2	4
ENSAOCP00000003709	zf-met	PF12874.7	3.9e-25	3	4
ENSAOCP00000003709	zf-met	PF12874.7	3.9e-25	4	4
ENSAOCP00000021936	zf-met	PF12874.7	6.4e-25	1	4
ENSAOCP00000021936	zf-met	PF12874.7	6.4e-25	2	4
ENSAOCP00000021936	zf-met	PF12874.7	6.4e-25	3	4
ENSAOCP00000021936	zf-met	PF12874.7	6.4e-25	4	4
ENSAOCP00000021919	zf-met	PF12874.7	2.6e-19	1	3
ENSAOCP00000021919	zf-met	PF12874.7	2.6e-19	2	3
ENSAOCP00000021919	zf-met	PF12874.7	2.6e-19	3	3
ENSAOCP00000021919	zf-C2H2_jaz	PF12171.8	3.6e-17	1	2
ENSAOCP00000021919	zf-C2H2_jaz	PF12171.8	3.6e-17	2	2
ENSAOCP00000021936	zf-C2H2_jaz	PF12171.8	7.3e-17	1	2
ENSAOCP00000021936	zf-C2H2_jaz	PF12171.8	7.3e-17	2	2
ENSAOCP00000003709	zf-C2H2_jaz	PF12171.8	2.1e-16	1	2
ENSAOCP00000003709	zf-C2H2_jaz	PF12171.8	2.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009280	-	2590	XM_023289290	ENSAOCP00000021936	609 (aa)	XP_023145058	UPI000C3034D2
ENSAOCT00000009313	-	1686	-	ENSAOCP00000003709	561 (aa)	-	-
ENSAOCT00000009332	-	1473	-	ENSAOCP00000021919	490 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000007093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000007093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000007093	-	93	88.889	ENSAPOG00000002875	-	100	92.593	Acanthochromis_polyacanthus
ENSAOCG00000007093	-	100	67.642	ENSATEG00000023589	-	100	68.618	Anabas_testudineus
ENSAOCG00000007093	-	100	67.541	ENSACLG00000012751	-	100	67.377	Astatotilapia_calliptera
ENSAOCG00000007093	-	95	45.181	ENSCVAG00000018034	-	66	51.149	Cyprinodon_variegatus
ENSAOCG00000007093	-	62	49.869	ENSELUG00000010589	-	61	50.919	Esox_lucius
ENSAOCG00000007093	-	56	45.973	ENSGMOG00000008972	-	73	46.230	Gadus_morhua
ENSAOCG00000007093	-	95	58.367	ENSGACG00000009018	-	100	60.843	Gasterosteus_aculeatus
ENSAOCG00000007093	-	100	67.103	ENSHBUG00000020963	-	100	67.103	Haplochromis_burtoni
ENSAOCG00000007093	-	96	48.065	ENSHCOG00000013075	-	100	47.104	Hippocampus_comes
ENSAOCG00000007093	-	97	44.086	ENSIPUG00000011933	-	68	45.742	Ictalurus_punctatus
ENSAOCG00000007093	-	100	65.756	ENSLBEG00000027221	-	99	66.077	Labrus_bergylta
ENSAOCG00000007093	-	100	67.377	ENSMZEG00005026847	-	100	67.213	Maylandia_zebra
ENSAOCG00000007093	-	69	65.957	ENSMMOG00000012396	-	76	66.194	Mola_mola
ENSAOCG00000007093	-	94	64.471	ENSMALG00000002560	-	100	68.677	Monopterus_albus
ENSAOCG00000007093	-	50	54.167	ENSPNAG00000006731	-	65	47.541	Pygocentrus_nattereri
ENSAOCG00000007093	-	95	58.045	ENSSMAG00000009994	-	98	62.152	Scophthalmus_maximus
ENSAOCG00000007093	-	100	70.081	ENSSDUG00000022406	-	100	71.220	Seriola_dumerili
ENSAOCG00000007093	-	98	71.785	ENSSPAG00000018876	-	100	84.405	Stegastes_partitus
ENSAOCG00000007093	-	53	36.170	ENSVVUG00000001235	ZNF346	71	35.537	Vulpes_vulpes