EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000007106 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 9826 bases
Position: chrNXFZ01003518.1:29800-39625
Accession: 111580015
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003727	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009270	-	825	XM_023287567	ENSAOCP00000003727	274 (aa)	XP_023143335	-
ENSAOCT00000009281	-	546	-	ENSAOCP00000021937	181 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000007106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000007106's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000007106	rab34b	55	37.333	ENSAOCG00000004234	rab23	77	39.752
ENSAOCG00000007106	rab34b	64	32.000	ENSAOCG00000016614	rab5c	88	30.516
ENSAOCG00000007106	rab34b	64	34.078	ENSAOCG00000020491	si:dkey-13a21.4	86	34.078
ENSAOCG00000007106	rab34b	64	33.908	ENSAOCG00000018239	rab11bb	74	33.908
ENSAOCG00000007106	rab34b	59	40.994	ENSAOCG00000012277	-	76	40.994
ENSAOCG00000007106	rab34b	66	32.240	ENSAOCG00000013479	rab18b	88	32.240
ENSAOCG00000007106	rab34b	59	39.130	ENSAOCG00000011103	rab6bb	76	39.130
ENSAOCG00000007106	rab34b	59	32.727	ENSAOCG00000008820	-	79	32.727
ENSAOCG00000007106	rab34b	59	37.888	ENSAOCG00000020606	-	79	37.888
ENSAOCG00000007106	rab34b	58	40.000	ENSAOCG00000015908	-	79	40.000
ENSAOCG00000007106	rab34b	94	70.428	ENSAOCG00000018544	rab34a	97	70.428
ENSAOCG00000007106	rab34b	61	36.145	ENSAOCG00000016825	si:dkey-16l2.16	95	33.816
ENSAOCG00000007106	rab34b	56	33.121	ENSAOCG00000020020	-	71	33.121
ENSAOCG00000007106	rab34b	63	36.932	ENSAOCG00000008492	rab14	80	36.932
ENSAOCG00000007106	rab34b	56	38.065	ENSAOCG00000007448	rab33a	55	38.065
ENSAOCG00000007106	rab34b	59	39.752	ENSAOCG00000024149	-	74	39.752
ENSAOCG00000007106	rab34b	63	34.682	ENSAOCG00000012921	rab42a	65	34.682
ENSAOCG00000007106	rab34b	57	38.854	ENSAOCG00000007928	RAB39B	73	38.854
ENSAOCG00000007106	rab34b	59	40.373	ENSAOCG00000022426	RAB41	75	40.373
ENSAOCG00000007106	rab34b	58	30.189	ENSAOCG00000010265	rheb	85	30.189
ENSAOCG00000007106	rab34b	54	41.333	ENSAOCG00000005301	-	62	41.333
ENSAOCG00000007106	rab34b	64	32.571	ENSAOCG00000000090	rab5aa	75	32.571
ENSAOCG00000007106	rab34b	60	36.364	ENSAOCG00000014658	rab2a	76	36.364
ENSAOCG00000007106	rab34b	58	36.025	ENSAOCG00000002130	rab12	65	36.250
ENSAOCG00000007106	rab34b	60	31.548	ENSAOCG00000013441	rab9a	80	31.548
ENSAOCG00000007106	rab34b	59	32.727	ENSAOCG00000005772	RAB7A	79	32.727
ENSAOCG00000007106	rab34b	59	39.752	ENSAOCG00000002298	rab6ba	76	39.752
ENSAOCG00000007106	rab34b	58	35.000	ENSAOCG00000009167	-	69	35.000
ENSAOCG00000007106	rab34b	58	37.500	ENSAOCG00000012556	rab30	56	37.500
ENSAOCG00000007106	rab34b	59	37.267	ENSAOCG00000006385	rab1ab	78	37.267
ENSAOCG00000007106	rab34b	59	37.267	ENSAOCG00000003965	rab1ba	80	37.267
ENSAOCG00000007106	rab34b	56	33.121	ENSAOCG00000011596	RAB9A	77	33.121
ENSAOCG00000007106	rab34b	57	34.615	ENSAOCG00000016233	rab18a	75	34.615
ENSAOCG00000007106	rab34b	58	32.298	ENSAOCG00000022810	rab9b	79	32.298
ENSAOCG00000007106	rab34b	64	35.227	ENSAOCG00000015678	rab11al	82	34.286
ENSAOCG00000007106	rab34b	91	50.996	ENSAOCG00000018241	rab36	94	50.996
ENSAOCG00000007106	rab34b	58	31.875	ENSAOCG00000001554	rab22a	81	31.875
ENSAOCG00000007106	rab34b	50	36.765	ENSAOCG00000015948	-	64	36.765
ENSAOCG00000007106	rab34b	61	36.527	ENSAOCG00000005797	rab15	77	36.527
ENSAOCG00000007106	rab34b	76	35.294	ENSAOCG00000005790	rab33ba	88	35.294
ENSAOCG00000007106	rab34b	61	38.922	ENSAOCG00000002532	RAB15	77	38.922
ENSAOCG00000007106	rab34b	64	31.818	ENSAOCG00000015713	rab25b	79	31.818
ENSAOCG00000007106	rab34b	61	37.952	ENSAOCG00000005934	rab35b	81	37.952
ENSAOCG00000007106	rab34b	76	32.227	ENSAOCG00000018050	rab11ba	94	32.227
ENSAOCG00000007106	rab34b	61	37.126	ENSAOCG00000018191	-	76	37.126
ENSAOCG00000007106	rab34b	76	31.818	ENSAOCG00000018849	-	94	31.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000007106	rab34b	81	96.861	ENSAPOG00000019147	rab34b	96	83.168	Acanthochromis_polyacanthus
ENSAOCG00000007106	rab34b	89	79.835	ENSACIG00000004859	rab34b	96	79.835	Amphilophus_citrinellus
ENSAOCG00000007106	rab34b	84	99.127	ENSAPEG00000018607	rab34b	86	95.417	Amphiprion_percula
ENSAOCG00000007106	rab34b	84	86.957	ENSATEG00000006851	rab34b	93	86.957	Anabas_testudineus
ENSAOCG00000007106	rab34b	94	85.992	ENSACLG00000005733	rab34b	96	85.992	Astatotilapia_calliptera
ENSAOCG00000007106	rab34b	94	68.992	ENSAMXG00000006018	rab34b	99	68.992	Astyanax_mexicanus
ENSAOCG00000007106	rab34b	87	82.845	ENSCSEG00000018133	rab34b	95	82.845	Cynoglossus_semilaevis
ENSAOCG00000007106	rab34b	85	76.068	ENSDARG00000010977	rab34b	91	76.068	Danio_rerio
ENSAOCG00000007106	rab34b	94	79.767	ENSELUG00000005597	rab34b	99	79.767	Esox_lucius
ENSAOCG00000007106	rab34b	93	82.812	ENSFHEG00000004532	rab34b	100	82.812	Fundulus_heteroclitus
ENSAOCG00000007106	rab34b	74	82.353	ENSGMOG00000007140	rab34b	99	82.353	Gadus_morhua
ENSAOCG00000007106	rab34b	94	86.047	ENSGACG00000020514	rab34b	100	86.047	Gasterosteus_aculeatus
ENSAOCG00000007106	rab34b	93	69.531	ENSIPUG00000024531	rab34	99	69.531	Ictalurus_punctatus
ENSAOCG00000007106	rab34b	93	82.812	ENSKMAG00000019341	rab34b	99	82.812	Kryptolebias_marmoratus
ENSAOCG00000007106	rab34b	93	85.547	ENSLBEG00000027819	rab34b	92	92.973	Labrus_bergylta
ENSAOCG00000007106	rab34b	84	90.909	ENSMAMG00000020214	rab34b	92	90.909	Mastacembelus_armatus
ENSAOCG00000007106	rab34b	88	90.041	ENSMMOG00000010936	rab34b	84	90.041	Mola_mola
ENSAOCG00000007106	rab34b	89	85.656	ENSMALG00000018499	rab34b	91	85.656	Monopterus_albus
ENSAOCG00000007106	rab34b	93	85.547	ENSONIG00000005519	rab34b	100	85.547	Oreochromis_niloticus
ENSAOCG00000007106	rab34b	94	82.490	ENSORLG00000003119	rab34b	92	82.490	Oryzias_latipes
ENSAOCG00000007106	rab34b	94	82.490	ENSORLG00020016139	rab34b	92	82.490	Oryzias_latipes_hni
ENSAOCG00000007106	rab34b	94	83.268	ENSORLG00015000584	rab34b	92	83.268	Oryzias_latipes_hsok
ENSAOCG00000007106	rab34b	92	84.064	ENSOMEG00000010334	rab34b	96	82.773	Oryzias_melastigma
ENSAOCG00000007106	rab34b	94	70.817	ENSPKIG00000013326	rab34b	99	70.817	Paramormyrops_kingsleyae
ENSAOCG00000007106	rab34b	94	80.934	ENSPMGG00000021697	rab34b	99	80.934	Periophthalmus_magnuspinnatus
ENSAOCG00000007106	rab34b	94	85.992	ENSPFOG00000011444	rab34b	100	85.992	Poecilia_formosa
ENSAOCG00000007106	rab34b	93	85.938	ENSPLAG00000005074	rab34b	100	85.938	Poecilia_latipinna
ENSAOCG00000007106	rab34b	93	85.938	ENSPMEG00000013297	rab34b	100	85.938	Poecilia_mexicana
ENSAOCG00000007106	rab34b	93	85.547	ENSPREG00000009813	rab34b	100	85.547	Poecilia_reticulata
ENSAOCG00000007106	rab34b	94	77.821	ENSPNYG00000017153	rab34b	99	91.525	Pundamilia_nyererei
ENSAOCG00000007106	rab34b	87	70.711	ENSPNAG00000015040	rab34b	100	70.711	Pygocentrus_nattereri
ENSAOCG00000007106	rab34b	94	71.984	ENSSFOG00015005188	rab34	99	71.984	Scleropages_formosus
ENSAOCG00000007106	rab34b	91	85.944	ENSSMAG00000019926	rab34b	98	85.944	Scophthalmus_maximus
ENSAOCG00000007106	rab34b	94	88.327	ENSSDUG00000016760	rab34b	80	88.327	Seriola_dumerili
ENSAOCG00000007106	rab34b	67	95.652	ENSSLDG00000014812	rab34b	90	95.652	Seriola_lalandi_dorsalis
ENSAOCG00000007106	rab34b	86	96.596	ENSSPAG00000002801	rab34b	93	96.596	Stegastes_partitus
ENSAOCG00000007106	rab34b	88	87.083	ENSTRUG00000014481	rab34b	97	87.083	Takifugu_rubripes
ENSAOCG00000007106	rab34b	94	81.008	ENSTNIG00000016158	rab34b	99	81.008	Tetraodon_nigroviridis