EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000007120 (Gene tree)
Gene ID: 111564275
Gene Symbol: cpsf1
Alias: wu:fb24c01
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 19575 bases
Position: chrNXFZ01006324.1:354928-374502
Accession: 111564275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000003708	CPSF_A	PF03178.15	1.2e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000009312	-	4323	XM_023263747	ENSAOCP00000003708	1440 (aa)	XP_023119515	-

Gene Model

Click here to download ENSAOCG00000007120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000007120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000007120	cpsf1	100	79.187	ENSG00000071894	CPSF1	100	80.556	Homo_sapiens
ENSAOCG00000007120	cpsf1	100	94.193	ENSAPOG00000019621	cpsf1	100	94.193	Acanthochromis_polyacanthus
ENSAOCG00000007120	cpsf1	97	77.952	ENSAMEG00000005557	CPSF1	99	77.881	Ailuropoda_melanoleuca
ENSAOCG00000007120	cpsf1	100	90.953	ENSACIG00000006112	cpsf1	100	91.022	Amphilophus_citrinellus
ENSAOCG00000007120	cpsf1	100	98.552	ENSAPEG00000005755	cpsf1	100	98.552	Amphiprion_percula
ENSAOCG00000007120	cpsf1	100	90.762	ENSATEG00000011097	cpsf1	100	90.897	Anabas_testudineus
ENSAOCG00000007120	cpsf1	93	74.317	ENSACAG00000009655	CPSF1	100	74.465	Anolis_carolinensis
ENSAOCG00000007120	cpsf1	100	79.394	ENSANAG00000036514	CPSF1	100	79.600	Aotus_nancymaae
ENSAOCG00000007120	cpsf1	99	91.263	ENSACLG00000012231	cpsf1	99	91.286	Astatotilapia_calliptera
ENSAOCG00000007120	cpsf1	100	79.793	ENSAMXG00000008485	cpsf1	100	79.724	Astyanax_mexicanus
ENSAOCG00000007120	cpsf1	100	78.011	ENSBTAG00000008355	CPSF1	100	78.740	Bos_taurus
ENSAOCG00000007120	cpsf1	100	33.158	WBGene00022301	cpsf-1	99	41.243	Caenorhabditis_elegans
ENSAOCG00000007120	cpsf1	100	79.669	ENSCJAG00000021421	CPSF1	100	79.531	Callithrix_jacchus
ENSAOCG00000007120	cpsf1	96	79.644	ENSCAFG00000001600	CPSF1	100	79.357	Canis_familiaris
ENSAOCG00000007120	cpsf1	100	79.121	ENSCAFG00020020821	CPSF1	100	79.190	Canis_lupus_dingo
ENSAOCG00000007120	cpsf1	100	75.465	ENSCHIG00000015833	CPSF1	100	75.190	Capra_hircus
ENSAOCG00000007120	cpsf1	100	80.000	ENSTSYG00000028560	CPSF1	100	81.481	Carlito_syrichta
ENSAOCG00000007120	cpsf1	97	78.947	ENSCAPG00000014921	CPSF1	99	78.734	Cavia_aperea
ENSAOCG00000007120	cpsf1	100	78.321	ENSCPOG00000011448	CPSF1	100	78.114	Cavia_porcellus
ENSAOCG00000007120	cpsf1	100	79.876	ENSCCAG00000037658	CPSF1	100	80.734	Cebus_capucinus
ENSAOCG00000007120	cpsf1	100	79.034	ENSCATG00000037234	CPSF1	100	80.556	Cercocebus_atys
ENSAOCG00000007120	cpsf1	100	79.683	ENSCLAG00000012166	CPSF1	100	79.477	Chinchilla_lanigera
ENSAOCG00000007120	cpsf1	100	79.586	ENSCSAG00000008502	CPSF1	100	79.379	Chlorocebus_sabaeus
ENSAOCG00000007120	cpsf1	99	80.473	ENSCPBG00000018910	CPSF1	96	80.612	Chrysemys_picta_bellii
ENSAOCG00000007120	cpsf1	96	48.887	ENSCING00000000514	-	100	48.958	Ciona_intestinalis
ENSAOCG00000007120	cpsf1	99	48.868	ENSCSAVG00000002293	-	99	51.163	Ciona_savignyi
ENSAOCG00000007120	cpsf1	98	77.179	ENSCANG00000032760	CPSF1	100	81.019	Colobus_angolensis_palliatus
ENSAOCG00000007120	cpsf1	100	79.394	ENSCGRG00001016344	Cpsf1	100	79.256	Cricetulus_griseus_chok1gshd
ENSAOCG00000007120	cpsf1	100	77.739	ENSCGRG00000003118	Cpsf1	100	77.464	Cricetulus_griseus_crigri
ENSAOCG00000007120	cpsf1	100	87.914	ENSCSEG00000013464	cpsf1	100	88.052	Cynoglossus_semilaevis
ENSAOCG00000007120	cpsf1	85	87.083	ENSCVAG00000014059	cpsf1	100	81.944	Cyprinodon_variegatus
ENSAOCG00000007120	cpsf1	100	86.942	ENSDARG00000034178	cpsf1	100	86.942	Danio_rerio
ENSAOCG00000007120	cpsf1	57	82.081	ENSDNOG00000043654	CPSF1	94	81.792	Dasypus_novemcinctus
ENSAOCG00000007120	cpsf1	97	79.601	ENSDORG00000006278	Cpsf1	99	79.601	Dipodomys_ordii
ENSAOCG00000007120	cpsf1	100	44.758	FBgn0024698	Cpsf160	100	44.777	Drosophila_melanogaster
ENSAOCG00000007120	cpsf1	80	85.906	ENSETEG00000006022	CPSF1	83	85.906	Echinops_telfairi
ENSAOCG00000007120	cpsf1	100	79.353	ENSEASG00005010774	CPSF1	100	79.491	Equus_asinus_asinus
ENSAOCG00000007120	cpsf1	100	79.215	ENSECAG00000022209	CPSF1	100	79.353	Equus_caballus
ENSAOCG00000007120	cpsf1	100	79.258	ENSEEUG00000000471	CPSF1	100	79.190	Erinaceus_europaeus
ENSAOCG00000007120	cpsf1	100	86.134	ENSELUG00000012271	cpsf1	100	86.270	Esox_lucius
ENSAOCG00000007120	cpsf1	100	80.000	ENSFDAG00000016060	CPSF1	100	79.793	Fukomys_damarensis
ENSAOCG00000007120	cpsf1	100	88.316	ENSFHEG00000016801	cpsf1	100	88.316	Fundulus_heteroclitus
ENSAOCG00000007120	cpsf1	100	86.745	ENSGMOG00000000796	cpsf1	100	87.225	Gadus_morhua
ENSAOCG00000007120	cpsf1	95	91.071	ENSGAFG00000018890	cpsf1	100	91.071	Gambusia_affinis
ENSAOCG00000007120	cpsf1	100	90.000	ENSGACG00000008703	cpsf1	100	90.055	Gasterosteus_aculeatus
ENSAOCG00000007120	cpsf1	100	78.369	ENSGAGG00000004276	CPSF1	98	81.364	Gopherus_agassizii
ENSAOCG00000007120	cpsf1	100	79.256	ENSGGOG00000016185	CPSF1	100	80.556	Gorilla_gorilla
ENSAOCG00000007120	cpsf1	100	93.089	ENSHBUG00000018900	cpsf1	100	93.158	Haplochromis_burtoni
ENSAOCG00000007120	cpsf1	100	79.683	ENSHGLG00000016139	CPSF1	100	79.477	Heterocephalus_glaber_female
ENSAOCG00000007120	cpsf1	100	79.614	ENSHGLG00100009750	CPSF1	100	79.408	Heterocephalus_glaber_male
ENSAOCG00000007120	cpsf1	100	87.060	ENSHCOG00000018509	cpsf1	100	87.060	Hippocampus_comes
ENSAOCG00000007120	cpsf1	100	83.059	ENSIPUG00000011259	cpsf1	100	82.990	Ictalurus_punctatus
ENSAOCG00000007120	cpsf1	97	79.362	ENSSTOG00000009957	CPSF1	99	79.291	Ictidomys_tridecemlineatus
ENSAOCG00000007120	cpsf1	100	79.477	ENSJJAG00000023002	Cpsf1	100	79.270	Jaculus_jaculus
ENSAOCG00000007120	cpsf1	91	94.357	ENSKMAG00000001940	cpsf1	99	94.357	Kryptolebias_marmoratus
ENSAOCG00000007120	cpsf1	100	89.039	ENSLBEG00000003601	cpsf1	100	89.242	Labrus_bergylta
ENSAOCG00000007120	cpsf1	88	77.751	ENSLACG00000000233	CPSF1	92	77.632	Latimeria_chalumnae
ENSAOCG00000007120	cpsf1	100	82.062	ENSLOCG00000008484	cpsf1	100	82.405	Lepisosteus_oculatus
ENSAOCG00000007120	cpsf1	97	79.332	ENSLAFG00000022601	CPSF1	100	79.261	Loxodonta_africana
ENSAOCG00000007120	cpsf1	100	79.103	ENSMFAG00000037013	CPSF1	100	80.556	Macaca_fascicularis
ENSAOCG00000007120	cpsf1	100	79.103	ENSMMUG00000007380	CPSF1	100	80.556	Macaca_mulatta
ENSAOCG00000007120	cpsf1	97	79.643	ENSMNEG00000043564	CPSF1	100	80.556	Macaca_nemestrina
ENSAOCG00000007120	cpsf1	100	79.103	ENSMLEG00000043010	CPSF1	100	80.556	Mandrillus_leucophaeus
ENSAOCG00000007120	cpsf1	100	91.020	ENSMAMG00000003803	cpsf1	100	91.222	Mastacembelus_armatus
ENSAOCG00000007120	cpsf1	100	89.496	ENSMZEG00005001168	cpsf1	100	89.565	Maylandia_zebra
ENSAOCG00000007120	cpsf1	100	79.394	ENSMAUG00000003601	Cpsf1	100	79.187	Mesocricetus_auratus
ENSAOCG00000007120	cpsf1	100	79.614	ENSMICG00000015767	CPSF1	100	79.545	Microcebus_murinus
ENSAOCG00000007120	cpsf1	100	79.201	ENSMOCG00000022758	Cpsf1	100	78.994	Microtus_ochrogaster
ENSAOCG00000007120	cpsf1	100	91.989	ENSMMOG00000021245	cpsf1	100	91.851	Mola_mola
ENSAOCG00000007120	cpsf1	100	79.464	ENSMODG00000010755	CPSF1	100	79.602	Monodelphis_domestica
ENSAOCG00000007120	cpsf1	100	90.196	ENSMALG00000020545	cpsf1	100	90.331	Monopterus_albus
ENSAOCG00000007120	cpsf1	100	79.807	MGP_CAROLIEiJ_G0019936	Cpsf1	100	79.600	Mus_caroli
ENSAOCG00000007120	cpsf1	100	79.876	ENSMUSG00000034022	Cpsf1	100	79.669	Mus_musculus
ENSAOCG00000007120	cpsf1	100	79.738	MGP_PahariEiJ_G0019946	Cpsf1	100	79.531	Mus_pahari
ENSAOCG00000007120	cpsf1	100	79.876	MGP_SPRETEiJ_G0020839	Cpsf1	100	79.669	Mus_spretus
ENSAOCG00000007120	cpsf1	94	79.559	ENSMPUG00000006419	CPSF1	93	79.706	Mustela_putorius_furo
ENSAOCG00000007120	cpsf1	100	79.339	ENSNGAG00000022460	Cpsf1	100	79.201	Nannospalax_galili
ENSAOCG00000007120	cpsf1	100	86.029	ENSNBRG00000000813	cpsf1	100	85.960	Neolamprologus_brichardi
ENSAOCG00000007120	cpsf1	86	69.820	ENSNLEG00000010633	-	100	80.556	Nomascus_leucogenys
ENSAOCG00000007120	cpsf1	82	87.791	ENSMEUG00000014922	CPSF1	85	87.791	Notamacropus_eugenii
ENSAOCG00000007120	cpsf1	60	88.421	ENSOPRG00000004693	-	70	88.421	Ochotona_princeps
ENSAOCG00000007120	cpsf1	100	79.683	ENSODEG00000013995	CPSF1	100	79.545	Octodon_degus
ENSAOCG00000007120	cpsf1	100	93.232	ENSONIG00000007676	cpsf1	100	93.370	Oreochromis_niloticus
ENSAOCG00000007120	cpsf1	58	78.571	ENSOANG00000010716	CPSF1	89	78.571	Ornithorhynchus_anatinus
ENSAOCG00000007120	cpsf1	100	88.363	ENSORLG00000013544	cpsf1	100	88.295	Oryzias_latipes
ENSAOCG00000007120	cpsf1	100	88.363	ENSORLG00020021693	cpsf1	100	88.295	Oryzias_latipes_hni
ENSAOCG00000007120	cpsf1	100	88.595	ENSORLG00015009979	cpsf1	100	88.527	Oryzias_latipes_hsok
ENSAOCG00000007120	cpsf1	100	88.535	ENSOMEG00000011849	cpsf1	100	88.602	Oryzias_melastigma
ENSAOCG00000007120	cpsf1	100	79.752	ENSOGAG00000000315	CPSF1	100	79.545	Otolemur_garnettii
ENSAOCG00000007120	cpsf1	100	79.325	ENSPPAG00000019280	CPSF1	100	81.900	Pan_paniscus
ENSAOCG00000007120	cpsf1	100	77.981	ENSPTRG00000051253	-	100	81.900	Pan_troglodytes
ENSAOCG00000007120	cpsf1	100	79.325	ENSPTRG00000049288	-	100	81.900	Pan_troglodytes
ENSAOCG00000007120	cpsf1	97	79.643	ENSPANG00000015005	CPSF1	100	80.556	Papio_anubis
ENSAOCG00000007120	cpsf1	100	86.708	ENSPKIG00000002582	cpsf1	100	86.983	Paramormyrops_kingsleyae
ENSAOCG00000007120	cpsf1	100	79.602	ENSPCIG00000009035	CPSF1	100	79.739	Phascolarctos_cinereus
ENSAOCG00000007120	cpsf1	100	87.677	ENSPFOG00000012870	cpsf1	100	88.100	Poecilia_formosa
ENSAOCG00000007120	cpsf1	100	87.635	ENSPREG00000016307	cpsf1	100	87.635	Poecilia_reticulata
ENSAOCG00000007120	cpsf1	100	72.383	ENSPPYG00000018973	CPSF1	100	72.245	Pongo_abelii
ENSAOCG00000007120	cpsf1	91	85.511	ENSPCAG00000011541	CPSF1	94	85.511	Procavia_capensis
ENSAOCG00000007120	cpsf1	100	76.187	ENSPCOG00000020001	CPSF1	100	80.556	Propithecus_coquereli
ENSAOCG00000007120	cpsf1	91	88.571	ENSPVAG00000006761	CPSF1	91	88.571	Pteropus_vampyrus
ENSAOCG00000007120	cpsf1	100	91.746	ENSPNYG00000004906	cpsf1	100	91.814	Pundamilia_nyererei
ENSAOCG00000007120	cpsf1	100	82.219	ENSPNAG00000024395	cpsf1	100	82.150	Pygocentrus_nattereri
ENSAOCG00000007120	cpsf1	100	79.531	ENSRNOG00000030705	Cpsf1	100	79.325	Rattus_norvegicus
ENSAOCG00000007120	cpsf1	100	79.172	ENSRBIG00000044907	CPSF1	100	81.019	Rhinopithecus_bieti
ENSAOCG00000007120	cpsf1	100	79.241	ENSRROG00000044861	CPSF1	100	81.019	Rhinopithecus_roxellana
ENSAOCG00000007120	cpsf1	97	80.014	ENSSBOG00000027177	CPSF1	99	79.872	Saimiri_boliviensis_boliviensis
ENSAOCG00000007120	cpsf1	100	79.588	ENSSHAG00000006500	CPSF1	100	79.588	Sarcophilus_harrisii
ENSAOCG00000007120	cpsf1	100	85.211	ENSSFOG00015004606	cpsf1	100	87.146	Scleropages_formosus
ENSAOCG00000007120	cpsf1	100	90.534	ENSSMAG00000020547	cpsf1	100	90.669	Scophthalmus_maximus
ENSAOCG00000007120	cpsf1	100	92.409	ENSSDUG00000001100	cpsf1	100	92.271	Seriola_dumerili
ENSAOCG00000007120	cpsf1	100	92.478	ENSSLDG00000003619	cpsf1	100	92.409	Seriola_lalandi_dorsalis
ENSAOCG00000007120	cpsf1	89	76.183	ENSSARG00000003643	CPSF1	92	76.103	Sorex_araneus
ENSAOCG00000007120	cpsf1	96	81.884	ENSSPUG00000014396	CPSF1	99	81.740	Sphenodon_punctatus
ENSAOCG00000007120	cpsf1	100	93.311	ENSSPAG00000005349	cpsf1	100	93.311	Stegastes_partitus
ENSAOCG00000007120	cpsf1	100	78.183	ENSSSCG00000005906	CPSF1	100	78.321	Sus_scrofa
ENSAOCG00000007120	cpsf1	96	88.174	ENSTRUG00000013134	cpsf1	99	88.034	Takifugu_rubripes
ENSAOCG00000007120	cpsf1	100	89.528	ENSTNIG00000014027	cpsf1	100	89.459	Tetraodon_nigroviridis
ENSAOCG00000007120	cpsf1	77	74.315	ENSTBEG00000001756	CPSF1	91	73.801	Tupaia_belangeri
ENSAOCG00000007120	cpsf1	90	84.138	ENSTTRG00000001937	CPSF1	90	83.966	Tursiops_truncatus
ENSAOCG00000007120	cpsf1	97	79.587	ENSUAMG00000006476	CPSF1	98	79.516	Ursus_americanus
ENSAOCG00000007120	cpsf1	100	88.398	ENSXCOG00000003608	cpsf1	100	88.536	Xiphophorus_couchianus
ENSAOCG00000007120	cpsf1	100	87.638	ENSXMAG00000005798	cpsf1	100	87.776	Xiphophorus_maculatus