EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000007574 (Gene tree)
Gene ID: 111582513
Gene Symbol: srl
Alias: im:6899248|wu:fb94b10|zgc:153844
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 4077 bases
Position: chrNXFZ01003898.1:53995-58071
Accession: 111582513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000022221	MMR_HSR1	PF01926.23	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000008498	-	1305	XM_023291218	ENSAOCP00000022221	434 (aa)	XP_023146986	-

Gene Model

Click here to download ENSAOCG00000007574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000007574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000007574	srl	64	31.541	ENSAOCG00000001953	-	56	31.541
ENSAOCG00000007574	srl	100	77.471	ENSAOCG00000017049	SRL	95	77.701
ENSAOCG00000007574	srl	89	31.701	ENSAOCG00000016322	ehd1a	70	31.701
ENSAOCG00000007574	srl	94	33.092	ENSAOCG00000006422	EHD2	74	33.092
ENSAOCG00000007574	srl	58	38.645	ENSAOCG00000002163	-	77	30.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000007574	srl	100	83.410	ENSG00000185739	SRL	99	83.721	Homo_sapiens
ENSAOCG00000007574	srl	99	77.367	ENSAPOG00000012432	SRL	96	77.367	Acanthochromis_polyacanthus
ENSAOCG00000007574	srl	100	99.770	ENSAPOG00000018093	srl	98	99.770	Acanthochromis_polyacanthus
ENSAOCG00000007574	srl	100	97.696	ENSACIG00000015799	srl	96	97.696	Amphilophus_citrinellus
ENSAOCG00000007574	srl	100	75.806	ENSACIG00000015419	SRL	97	75.806	Amphilophus_citrinellus
ENSAOCG00000007574	srl	100	73.963	ENSAPEG00000006533	SRL	94	74.483	Amphiprion_percula
ENSAOCG00000007574	srl	100	100.000	ENSAPEG00000006911	srl	92	100.000	Amphiprion_percula
ENSAOCG00000007574	srl	100	98.387	ENSATEG00000024315	srl	92	98.387	Anabas_testudineus
ENSAOCG00000007574	srl	100	76.510	ENSATEG00000009643	SRL	51	76.734	Anabas_testudineus
ENSAOCG00000007574	srl	99	82.472	ENSACAG00000016380	SRL	82	82.472	Anolis_carolinensis
ENSAOCG00000007574	srl	100	97.465	ENSACLG00000027685	srl	95	97.465	Astatotilapia_calliptera
ENSAOCG00000007574	srl	100	74.497	ENSACLG00000024674	SRL	55	76.225	Astatotilapia_calliptera
ENSAOCG00000007574	srl	99	94.457	ENSAMXG00000018789	srl	85	94.457	Astyanax_mexicanus
ENSAOCG00000007574	srl	95	78.832	ENSAMXG00000038693	SRL	98	74.775	Astyanax_mexicanus
ENSAOCG00000007574	srl	99	84.491	ENSBTAG00000001078	SRL	55	84.491	Bos_taurus
ENSAOCG00000007574	srl	100	83.410	ENSCJAG00000019750	SRL	92	83.410	Callithrix_jacchus
ENSAOCG00000007574	srl	100	83.410	ENSCAFG00000019233	SRL	81	83.410	Canis_familiaris
ENSAOCG00000007574	srl	99	83.603	ENSCAFG00020025024	SRL	53	83.603	Canis_lupus_dingo
ENSAOCG00000007574	srl	99	84.491	ENSCHIG00000017927	SRL	54	84.491	Capra_hircus
ENSAOCG00000007574	srl	100	84.101	ENSTSYG00000007919	SRL	99	84.419	Carlito_syrichta
ENSAOCG00000007574	srl	100	83.871	ENSCPOG00000012643	SRL	92	83.871	Cavia_porcellus
ENSAOCG00000007574	srl	91	83.838	ENSCCAG00000032646	SRL	100	84.697	Cebus_capucinus
ENSAOCG00000007574	srl	100	83.410	ENSCATG00000032227	-	92	83.410	Cercocebus_atys
ENSAOCG00000007574	srl	100	84.101	ENSCLAG00000016242	SRL	92	84.101	Chinchilla_lanigera
ENSAOCG00000007574	srl	89	86.234	ENSCHOG00000001618	SRL	52	86.234	Choloepus_hoffmanni
ENSAOCG00000007574	srl	99	85.751	ENSCPBG00000026371	SRL	92	81.757	Chrysemys_picta_bellii
ENSAOCG00000007574	srl	94	60.880	ENSCING00000005231	-	91	60.880	Ciona_intestinalis
ENSAOCG00000007574	srl	100	83.410	ENSCANG00000035872	SRL	99	83.721	Colobus_angolensis_palliatus
ENSAOCG00000007574	srl	100	84.793	ENSCGRG00001016630	Srl	92	84.793	Cricetulus_griseus_chok1gshd
ENSAOCG00000007574	srl	100	84.793	ENSCGRG00000005458	Srl	92	84.793	Cricetulus_griseus_crigri
ENSAOCG00000007574	srl	100	75.862	ENSCSEG00000011866	SRL	87	76.092	Cynoglossus_semilaevis
ENSAOCG00000007574	srl	100	96.313	ENSCSEG00000016151	srl	93	96.313	Cynoglossus_semilaevis
ENSAOCG00000007574	srl	100	76.577	ENSCVAG00000022465	SRL	59	76.577	Cyprinodon_variegatus
ENSAOCG00000007574	srl	100	95.622	ENSCVAG00000003513	srl	94	95.622	Cyprinodon_variegatus
ENSAOCG00000007574	srl	100	94.009	ENSDARG00000104587	srl	92	94.009	Danio_rerio
ENSAOCG00000007574	srl	87	78.125	ENSDARG00000112959	CABZ01072309.1	100	78.125	Danio_rerio
ENSAOCG00000007574	srl	99	84.065	ENSDNOG00000011643	SRL	52	84.065	Dasypus_novemcinctus
ENSAOCG00000007574	srl	100	84.332	ENSDORG00000014807	Srl	92	84.332	Dipodomys_ordii
ENSAOCG00000007574	srl	85	65.775	ENSEBUG00000015937	srl	94	65.775	Eptatretus_burgeri
ENSAOCG00000007574	srl	99	84.028	ENSEASG00005000942	SRL	52	84.028	Equus_asinus_asinus
ENSAOCG00000007574	srl	99	83.834	ENSECAG00000024219	SRL	92	83.834	Equus_caballus
ENSAOCG00000007574	srl	97	90.736	ENSELUG00000015616	srl	92	86.830	Esox_lucius
ENSAOCG00000007574	srl	100	83.180	ENSFCAG00000022075	SRL	92	83.180	Felis_catus
ENSAOCG00000007574	srl	99	83.796	ENSFALG00000004328	SRL	61	83.796	Ficedula_albicollis
ENSAOCG00000007574	srl	99	84.988	ENSFDAG00000006199	SRL	92	84.988	Fukomys_damarensis
ENSAOCG00000007574	srl	100	95.622	ENSFHEG00000011239	srl	94	95.622	Fundulus_heteroclitus
ENSAOCG00000007574	srl	100	76.498	ENSFHEG00000011854	SRL	97	76.728	Fundulus_heteroclitus
ENSAOCG00000007574	srl	99	91.236	ENSGMOG00000014954	srl	98	91.236	Gadus_morhua
ENSAOCG00000007574	srl	99	84.028	ENSGALG00000038884	SRL	92	84.028	Gallus_gallus
ENSAOCG00000007574	srl	100	77.880	ENSGAFG00000016984	SRL	97	77.880	Gambusia_affinis
ENSAOCG00000007574	srl	100	95.853	ENSGAFG00000000010	srl	94	95.853	Gambusia_affinis
ENSAOCG00000007574	srl	99	94.607	ENSGACG00000011332	srl	98	94.607	Gasterosteus_aculeatus
ENSAOCG00000007574	srl	100	83.410	ENSGGOG00000011312	-	92	83.410	Gorilla_gorilla
ENSAOCG00000007574	srl	100	97.465	ENSHBUG00000007581	srl	95	97.465	Haplochromis_burtoni
ENSAOCG00000007574	srl	100	74.944	ENSHBUG00000015710	SRL	56	74.944	Haplochromis_burtoni
ENSAOCG00000007574	srl	100	84.562	ENSHGLG00000015271	SRL	92	84.562	Heterocephalus_glaber_female
ENSAOCG00000007574	srl	100	84.562	ENSHGLG00100019378	SRL	92	84.562	Heterocephalus_glaber_male
ENSAOCG00000007574	srl	100	97.235	ENSHCOG00000008687	srl	96	97.235	Hippocampus_comes
ENSAOCG00000007574	srl	100	93.318	ENSIPUG00000012513	srl	93	93.318	Ictalurus_punctatus
ENSAOCG00000007574	srl	98	70.023	ENSIPUG00000011609	SRL	93	70.023	Ictalurus_punctatus
ENSAOCG00000007574	srl	99	84.527	ENSSTOG00000021151	-	92	84.527	Ictidomys_tridecemlineatus
ENSAOCG00000007574	srl	99	84.758	ENSJJAG00000016400	Srl	92	84.758	Jaculus_jaculus
ENSAOCG00000007574	srl	98	96.226	ENSKMAG00000014115	srl	93	96.675	Kryptolebias_marmoratus
ENSAOCG00000007574	srl	100	76.959	ENSKMAG00000019537	SRL	98	76.959	Kryptolebias_marmoratus
ENSAOCG00000007574	srl	99	75.806	ENSLBEG00000013811	SRL	94	76.037	Labrus_bergylta
ENSAOCG00000007574	srl	100	97.005	ENSLBEG00000026643	srl	92	97.005	Labrus_bergylta
ENSAOCG00000007574	srl	99	85.450	ENSLACG00000002825	SRL	96	85.450	Latimeria_chalumnae
ENSAOCG00000007574	srl	100	90.783	ENSLOCG00000002644	srl	93	90.783	Lepisosteus_oculatus
ENSAOCG00000007574	srl	99	83.721	ENSMFAG00000037383	SRL	99	83.721	Macaca_fascicularis
ENSAOCG00000007574	srl	100	83.410	ENSMNEG00000019236	-	92	83.410	Macaca_nemestrina
ENSAOCG00000007574	srl	89	83.763	ENSMLEG00000032156	SRL	88	83.763	Mandrillus_leucophaeus
ENSAOCG00000007574	srl	100	98.387	ENSMAMG00000023322	srl	92	98.387	Mastacembelus_armatus
ENSAOCG00000007574	srl	100	75.615	ENSMAMG00000013756	SRL	52	75.615	Mastacembelus_armatus
ENSAOCG00000007574	srl	100	97.465	ENSMZEG00005004548	srl	95	97.465	Maylandia_zebra
ENSAOCG00000007574	srl	100	74.720	ENSMZEG00005004010	SRL	56	74.720	Maylandia_zebra
ENSAOCG00000007574	srl	99	84.028	ENSMGAG00000009342	SRL	90	86.835	Meleagris_gallopavo
ENSAOCG00000007574	srl	100	83.871	ENSMICG00000032307	SRL	92	83.871	Microcebus_murinus
ENSAOCG00000007574	srl	100	84.101	ENSMOCG00000008208	Srl	92	84.101	Microtus_ochrogaster
ENSAOCG00000007574	srl	100	74.777	ENSMMOG00000021572	SRL	98	74.777	Mola_mola
ENSAOCG00000007574	srl	100	97.235	ENSMMOG00000013970	srl	96	97.235	Mola_mola
ENSAOCG00000007574	srl	97	76.850	ENSMALG00000000670	SRL	98	76.850	Monopterus_albus
ENSAOCG00000007574	srl	100	96.774	ENSMALG00000005039	srl	96	96.774	Monopterus_albus
ENSAOCG00000007574	srl	100	85.023	MGP_CAROLIEiJ_G0020400	Srl	92	85.023	Mus_caroli
ENSAOCG00000007574	srl	100	85.023	ENSMUSG00000022519	Srl	92	85.023	Mus_musculus
ENSAOCG00000007574	srl	100	85.023	MGP_SPRETEiJ_G0021294	Srl	92	85.023	Mus_spretus
ENSAOCG00000007574	srl	99	83.603	ENSMPUG00000015025	SRL	52	83.603	Mustela_putorius_furo
ENSAOCG00000007574	srl	99	84.296	ENSMLUG00000030733	SRL	54	84.296	Myotis_lucifugus
ENSAOCG00000007574	srl	100	85.023	ENSNGAG00000019741	Srl	92	85.023	Nannospalax_galili
ENSAOCG00000007574	srl	100	97.235	ENSNBRG00000023775	srl	92	97.235	Neolamprologus_brichardi
ENSAOCG00000007574	srl	100	74.720	ENSNBRG00000002422	SRL	56	75.926	Neolamprologus_brichardi
ENSAOCG00000007574	srl	89	85.309	ENSNLEG00000029051	SRL	88	85.309	Nomascus_leucogenys
ENSAOCG00000007574	srl	100	84.332	ENSODEG00000013256	SRL	92	84.332	Octodon_degus
ENSAOCG00000007574	srl	100	97.465	ENSONIG00000005192	srl	92	97.465	Oreochromis_niloticus
ENSAOCG00000007574	srl	99	75.406	ENSORLG00000015064	SRL	94	75.406	Oryzias_latipes
ENSAOCG00000007574	srl	100	96.774	ENSORLG00000008291	srl	92	96.907	Oryzias_latipes
ENSAOCG00000007574	srl	100	97.235	ENSORLG00020019784	srl	79	97.423	Oryzias_latipes_hni
ENSAOCG00000007574	srl	99	75.638	ENSORLG00020018173	SRL	94	75.638	Oryzias_latipes_hni
ENSAOCG00000007574	srl	99	75.638	ENSORLG00015019063	SRL	94	75.638	Oryzias_latipes_hsok
ENSAOCG00000007574	srl	100	97.235	ENSORLG00015009342	srl	89	97.235	Oryzias_latipes_hsok
ENSAOCG00000007574	srl	99	74.099	ENSOMEG00000005682	SRL	52	74.382	Oryzias_melastigma
ENSAOCG00000007574	srl	100	96.544	ENSOMEG00000010006	srl	96	96.544	Oryzias_melastigma
ENSAOCG00000007574	srl	99	83.603	ENSOGAG00000029266	SRL	53	83.603	Otolemur_garnettii
ENSAOCG00000007574	srl	99	84.296	ENSOARG00000003074	SRL	54	84.296	Ovis_aries
ENSAOCG00000007574	srl	100	83.410	ENSPPAG00000024919	-	99	83.721	Pan_paniscus
ENSAOCG00000007574	srl	100	83.180	ENSPPRG00000010274	SRL	99	83.488	Panthera_pardus
ENSAOCG00000007574	srl	100	83.180	ENSPTIG00000015162	SRL	99	83.488	Panthera_tigris_altaica
ENSAOCG00000007574	srl	100	83.410	ENSPTRG00000007712	SRL	99	83.721	Pan_troglodytes
ENSAOCG00000007574	srl	100	83.410	ENSPANG00000013804	SRL	93	83.410	Papio_anubis
ENSAOCG00000007574	srl	100	93.779	ENSPKIG00000006405	srl	92	93.779	Paramormyrops_kingsleyae
ENSAOCG00000007574	srl	100	80.645	ENSPKIG00000024974	SRL	86	80.645	Paramormyrops_kingsleyae
ENSAOCG00000007574	srl	100	95.622	ENSPMGG00000021081	srl	94	95.622	Periophthalmus_magnuspinnatus
ENSAOCG00000007574	srl	99	75.751	ENSPMGG00000023505	-	98	75.751	Periophthalmus_magnuspinnatus
ENSAOCG00000007574	srl	100	84.332	ENSPEMG00000015842	Srl	92	84.332	Peromyscus_maniculatus_bairdii
ENSAOCG00000007574	srl	97	68.578	ENSPMAG00000004786	srl	99	68.578	Petromyzon_marinus
ENSAOCG00000007574	srl	99	84.296	ENSPCIG00000012128	SRL	95	84.296	Phascolarctos_cinereus
ENSAOCG00000007574	srl	100	93.498	ENSPFOG00000011408	srl	92	93.483	Poecilia_formosa
ENSAOCG00000007574	srl	100	76.728	ENSPLAG00000002932	SRL	97	76.728	Poecilia_latipinna
ENSAOCG00000007574	srl	100	96.083	ENSPLAG00000008017	srl	94	96.083	Poecilia_latipinna
ENSAOCG00000007574	srl	100	96.083	ENSPMEG00000006745	srl	94	96.083	Poecilia_mexicana
ENSAOCG00000007574	srl	100	74.944	ENSPMEG00000005890	SRL	58	74.497	Poecilia_mexicana
ENSAOCG00000007574	srl	100	96.313	ENSPREG00000007751	srl	96	96.313	Poecilia_reticulata
ENSAOCG00000007574	srl	100	77.419	ENSPREG00000000315	SRL	97	77.419	Poecilia_reticulata
ENSAOCG00000007574	srl	97	85.203	ENSPPYG00000007053	SRL	98	85.203	Pongo_abelii
ENSAOCG00000007574	srl	100	83.871	ENSPCOG00000023135	SRL	99	84.186	Propithecus_coquereli
ENSAOCG00000007574	srl	99	84.065	ENSPVAG00000006586	SRL	53	84.065	Pteropus_vampyrus
ENSAOCG00000007574	srl	100	97.465	ENSPNYG00000001200	srl	95	97.465	Pundamilia_nyererei
ENSAOCG00000007574	srl	100	74.720	ENSPNYG00000003423	SRL	56	74.720	Pundamilia_nyererei
ENSAOCG00000007574	srl	100	94.240	ENSPNAG00000023106	srl	92	94.240	Pygocentrus_nattereri
ENSAOCG00000007574	srl	100	75.576	ENSPNAG00000007361	-	89	75.576	Pygocentrus_nattereri
ENSAOCG00000007574	srl	100	83.410	ENSSBOG00000029273	SRL	92	83.410	Saimiri_boliviensis_boliviensis
ENSAOCG00000007574	srl	100	93.779	ENSSFOG00015009773	srl	93	93.779	Scleropages_formosus
ENSAOCG00000007574	srl	100	97.235	ENSSMAG00000016274	srl	95	97.235	Scophthalmus_maximus
ENSAOCG00000007574	srl	100	77.098	ENSSDUG00000009161	SRL	97	77.098	Seriola_dumerili
ENSAOCG00000007574	srl	100	97.696	ENSSDUG00000010808	srl	96	97.696	Seriola_dumerili
ENSAOCG00000007574	srl	100	76.837	ENSSLDG00000014601	SRL	98	77.405	Seriola_lalandi_dorsalis
ENSAOCG00000007574	srl	100	97.696	ENSSLDG00000022024	srl	94	97.696	Seriola_lalandi_dorsalis
ENSAOCG00000007574	srl	99	84.101	ENSSPUG00000016859	SRL	96	84.101	Sphenodon_punctatus
ENSAOCG00000007574	srl	100	77.880	ENSSPAG00000014254	SRL	97	77.880	Stegastes_partitus
ENSAOCG00000007574	srl	100	99.539	ENSSPAG00000019105	srl	92	99.539	Stegastes_partitus
ENSAOCG00000007574	srl	99	83.796	ENSSSCG00000007949	SRL	96	83.603	Sus_scrofa
ENSAOCG00000007574	srl	83	85.912	ENSTGUG00000016121	-	100	85.912	Taeniopygia_guttata
ENSAOCG00000007574	srl	99	84.028	ENSTGUG00000003951	-	95	84.028	Taeniopygia_guttata
ENSAOCG00000007574	srl	97	78.282	ENSTRUG00000013310	SRL	55	78.282	Takifugu_rubripes
ENSAOCG00000007574	srl	100	97.235	ENSTRUG00000006005	srl	92	97.235	Takifugu_rubripes
ENSAOCG00000007574	srl	100	97.465	ENSTNIG00000009739	srl	92	97.465	Tetraodon_nigroviridis
ENSAOCG00000007574	srl	99	83.603	ENSUAMG00000005701	SRL	54	83.603	Ursus_americanus
ENSAOCG00000007574	srl	99	83.603	ENSUMAG00000002574	SRL	53	83.603	Ursus_maritimus
ENSAOCG00000007574	srl	99	82.448	ENSXETG00000017313	srl	96	82.448	Xenopus_tropicalis
ENSAOCG00000007574	srl	97	95.724	ENSXCOG00000010424	srl	97	95.724	Xiphophorus_couchianus
ENSAOCG00000007574	srl	100	77.650	ENSXCOG00000014584	SRL	96	77.650	Xiphophorus_couchianus
ENSAOCG00000007574	srl	100	75.168	ENSXMAG00000027598	SRL	61	75.168	Xiphophorus_maculatus
ENSAOCG00000007574	srl	100	95.853	ENSXMAG00000004625	srl	88	95.853	Xiphophorus_maculatus