EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000007806 (Gene tree)
Gene ID: 111571395
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 15646 bases
Position: chrNXFZ01002776.1:83805-99450
Accession: 111571395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000022365	KH_1	PF00013.29	1.6e-45	1	3
ENSAOCP00000022365	KH_1	PF00013.29	1.6e-45	2	3
ENSAOCP00000022365	KH_1	PF00013.29	1.6e-45	3	3
ENSAOCP00000022365	KH_2	PF07650.17	8.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000008148	-	879	XM_023274516	ENSAOCP00000022365	292 (aa)	XP_023130284	-

Gene Model

Click here to download ENSAOCG00000007806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000007806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000007806	-	98	34.586	ENSAOCG00000016871	igf2bp2b	53	34.586
ENSAOCG00000007806	-	98	39.437	ENSAOCG00000011292	nova1	53	39.437
ENSAOCG00000007806	-	68	41.176	ENSAOCG00000010049	khsrp	51	42.188
ENSAOCG00000007806	-	95	58.746	ENSAOCG00000021366	-	68	58.746
ENSAOCG00000007806	-	99	74.394	ENSAOCG00000010959	pcbp2	87	74.394
ENSAOCG00000007806	-	96	93.262	ENSAOCG00000008592	-	93	93.262
ENSAOCG00000007806	-	78	34.694	ENSAOCG00000015110	fubp3	66	34.694
ENSAOCG00000007806	-	68	39.706	ENSAOCG00000010189	KHSRP	69	39.706
ENSAOCG00000007806	-	99	73.154	ENSAOCG00000005296	PCBP2	87	73.154
ENSAOCG00000007806	-	66	43.056	ENSAOCG00000013373	-	51	43.056
ENSAOCG00000007806	-	81	72.093	ENSAOCG00000005266	zgc:110045	82	72.093
ENSAOCG00000007806	-	90	58.397	ENSAOCG00000006924	-	90	58.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000007806	-	99	91.379	ENSAPOG00000020003	pcbp3	79	91.379	Acanthochromis_polyacanthus
ENSAOCG00000007806	-	100	93.624	ENSAPOG00000016582	-	91	95.053	Acanthochromis_polyacanthus
ENSAOCG00000007806	-	100	91.667	ENSAMEG00000001697	-	89	91.667	Ailuropoda_melanoleuca
ENSAOCG00000007806	-	99	84.127	ENSACIG00000010933	pcbp3	88	84.127	Amphilophus_citrinellus
ENSAOCG00000007806	-	100	92.667	ENSACIG00000002739	-	89	92.667	Amphilophus_citrinellus
ENSAOCG00000007806	-	100	95.222	ENSAPEG00000005209	-	88	95.222	Amphiprion_percula
ENSAOCG00000007806	-	97	85.621	ENSAPEG00000008011	pcbp3	91	85.621	Amphiprion_percula
ENSAOCG00000007806	-	96	86.230	ENSATEG00000015787	-	90	86.230	Anabas_testudineus
ENSAOCG00000007806	-	100	95.222	ENSATEG00000009833	-	89	95.222	Anabas_testudineus
ENSAOCG00000007806	-	98	72.404	ENSAPLG00000008951	-	78	72.404	Anas_platyrhynchos
ENSAOCG00000007806	-	100	92.542	ENSAPLG00000002975	-	96	92.542	Anas_platyrhynchos
ENSAOCG00000007806	-	100	79.683	ENSACAG00000009819	-	95	79.683	Anolis_carolinensis
ENSAOCG00000007806	-	100	84.568	ENSACAG00000004607	-	96	84.568	Anolis_carolinensis
ENSAOCG00000007806	-	85	91.600	ENSANAG00000030702	-	100	91.600	Aotus_nancymaae
ENSAOCG00000007806	-	100	94.539	ENSACLG00000003801	-	95	94.539	Astatotilapia_calliptera
ENSAOCG00000007806	-	99	83.810	ENSACLG00000011835	pcbp3	93	83.810	Astatotilapia_calliptera
ENSAOCG00000007806	-	95	67.869	ENSAMXG00000001760	zgc:110045	66	67.869	Astyanax_mexicanus
ENSAOCG00000007806	-	96	91.103	ENSAMXG00000013588	-	89	91.103	Astyanax_mexicanus
ENSAOCG00000007806	-	97	87.255	ENSAMXG00000003440	pcbp3	91	87.255	Astyanax_mexicanus
ENSAOCG00000007806	-	92	96.482	ENSCAFG00020019472	-	80	96.482	Canis_lupus_dingo
ENSAOCG00000007806	-	100	92.833	ENSCSAG00000007440	-	87	92.833	Chlorocebus_sabaeus
ENSAOCG00000007806	-	100	91.694	ENSCPBG00000012151	-	96	91.694	Chrysemys_picta_bellii
ENSAOCG00000007806	-	98	78.457	ENSCPBG00000000733	-	72	78.457	Chrysemys_picta_bellii
ENSAOCG00000007806	-	100	79.100	ENSCSEG00000016984	-	91	79.100	Cynoglossus_semilaevis
ENSAOCG00000007806	-	96	91.844	ENSCSEG00000000822	pcbp3	89	91.844	Cynoglossus_semilaevis
ENSAOCG00000007806	-	100	94.881	ENSCVAG00000005262	-	88	94.881	Cyprinodon_variegatus
ENSAOCG00000007806	-	97	85.902	ENSCVAG00000014482	pcbp3	91	85.902	Cyprinodon_variegatus
ENSAOCG00000007806	-	100	87.975	ENSDARG00000054378	pcbp3	96	87.975	Danio_rerio
ENSAOCG00000007806	-	85	91.200	ENSETEG00000015988	-	75	91.200	Echinops_telfairi
ENSAOCG00000007806	-	99	70.345	ENSEBUG00000016192	pcbp3	99	70.968	Eptatretus_burgeri
ENSAOCG00000007806	-	93	70.874	ENSEBUG00000005495	pcbp3	62	70.874	Eptatretus_burgeri
ENSAOCG00000007806	-	100	77.027	ENSEBUG00000007485	-	78	80.749	Eptatretus_burgeri
ENSAOCG00000007806	-	97	94.346	ENSELUG00000001560	-	90	86.349	Esox_lucius
ENSAOCG00000007806	-	98	87.500	ENSELUG00000003521	pcbp3	91	86.275	Esox_lucius
ENSAOCG00000007806	-	100	92.466	ENSFALG00000003949	-	96	92.466	Ficedula_albicollis
ENSAOCG00000007806	-	98	72.404	ENSFALG00000004411	-	74	72.404	Ficedula_albicollis
ENSAOCG00000007806	-	100	95.222	ENSFHEG00000006539	-	88	95.222	Fundulus_heteroclitus
ENSAOCG00000007806	-	97	93.310	ENSFHEG00000016615	pcbp3	86	93.310	Fundulus_heteroclitus
ENSAOCG00000007806	-	97	79.322	ENSGMOG00000011992	pcbp3	92	80.000	Gadus_morhua
ENSAOCG00000007806	-	96	73.793	ENSGMOG00000008611	-	88	73.793	Gadus_morhua
ENSAOCG00000007806	-	99	78.025	ENSGALG00000013155	-	93	78.025	Gallus_gallus
ENSAOCG00000007806	-	100	85.139	ENSGALG00000004394	-	98	89.674	Gallus_gallus
ENSAOCG00000007806	-	100	84.494	ENSGAFG00000011430	pcbp3	88	84.494	Gambusia_affinis
ENSAOCG00000007806	-	97	94.700	ENSGAFG00000010274	-	91	94.700	Gambusia_affinis
ENSAOCG00000007806	-	100	93.709	ENSGACG00000002266	-	96	93.709	Gasterosteus_aculeatus
ENSAOCG00000007806	-	100	78.947	ENSGACG00000014955	-	96	78.947	Gasterosteus_aculeatus
ENSAOCG00000007806	-	76	96.689	ENSGAGG00000006956	-	63	96.689	Gopherus_agassizii
ENSAOCG00000007806	-	95	85.971	ENSGAGG00000000271	-	100	85.971	Gopherus_agassizii
ENSAOCG00000007806	-	100	94.539	ENSHBUG00000021782	-	95	94.539	Haplochromis_burtoni
ENSAOCG00000007806	-	96	93.238	ENSHBUG00000010697	pcbp3	85	93.238	Haplochromis_burtoni
ENSAOCG00000007806	-	97	85.902	ENSHCOG00000017868	pcbp3	91	85.902	Hippocampus_comes
ENSAOCG00000007806	-	100	90.068	ENSHCOG00000006067	-	95	90.068	Hippocampus_comes
ENSAOCG00000007806	-	100	94.198	ENSIPUG00000006238	pcbp3	90	94.198	Ictalurus_punctatus
ENSAOCG00000007806	-	97	94.346	ENSKMAG00000018530	-	91	94.346	Kryptolebias_marmoratus
ENSAOCG00000007806	-	97	85.621	ENSKMAG00000003046	pcbp3	91	85.621	Kryptolebias_marmoratus
ENSAOCG00000007806	-	99	91.724	ENSLBEG00000006201	pcbp3	87	91.724	Labrus_bergylta
ENSAOCG00000007806	-	89	87.218	ENSLBEG00000006542	-	86	87.218	Labrus_bergylta
ENSAOCG00000007806	-	97	79.027	ENSLACG00000010386	pcbp3	72	79.027	Latimeria_chalumnae
ENSAOCG00000007806	-	98	72.455	ENSLACG00000010804	zgc:110045	73	72.455	Latimeria_chalumnae
ENSAOCG00000007806	-	100	91.694	ENSLOCG00000009369	pcbp3	96	91.694	Lepisosteus_oculatus
ENSAOCG00000007806	-	97	78.361	ENSLOCG00000005058	zgc:110045	78	78.361	Lepisosteus_oculatus
ENSAOCG00000007806	-	96	93.594	ENSMAMG00000022336	pcbp3	83	93.594	Mastacembelus_armatus
ENSAOCG00000007806	-	100	94.198	ENSMAMG00000011620	-	89	94.198	Mastacembelus_armatus
ENSAOCG00000007806	-	100	87.097	ENSMZEG00005014882	-	91	87.097	Maylandia_zebra
ENSAOCG00000007806	-	99	84.127	ENSMZEG00005008993	pcbp3	86	85.809	Maylandia_zebra
ENSAOCG00000007806	-	98	72.404	ENSMGAG00000006794	-	74	72.404	Meleagris_gallopavo
ENSAOCG00000007806	-	96	78.846	ENSMGAG00000001883	-	93	79.167	Meleagris_gallopavo
ENSAOCG00000007806	-	100	94.198	ENSMMOG00000005216	-	90	94.198	Mola_mola
ENSAOCG00000007806	-	96	93.594	ENSMMOG00000000730	pcbp3	76	93.594	Mola_mola
ENSAOCG00000007806	-	82	79.439	ENSMODG00000027884	-	93	79.439	Monodelphis_domestica
ENSAOCG00000007806	-	96	85.855	ENSMALG00000000691	pcbp3	86	85.855	Monopterus_albus
ENSAOCG00000007806	-	99	89.262	ENSMPUG00000001779	-	82	89.262	Mustela_putorius_furo
ENSAOCG00000007806	-	99	84.395	ENSNBRG00000016409	-	88	84.395	Neolamprologus_brichardi
ENSAOCG00000007806	-	100	88.158	ENSNBRG00000016714	-	91	88.158	Neolamprologus_brichardi
ENSAOCG00000007806	-	96	84.244	ENSOPRG00000003431	-	90	84.244	Ochotona_princeps
ENSAOCG00000007806	-	96	84.295	ENSONIG00000012122	-	93	84.295	Oreochromis_niloticus
ENSAOCG00000007806	-	100	94.539	ENSONIG00000004611	-	95	94.539	Oreochromis_niloticus
ENSAOCG00000007806	-	100	92.466	ENSOCUG00000002696	-	87	92.466	Oryctolagus_cuniculus
ENSAOCG00000007806	-	96	93.262	ENSORLG00000000059	pcbp3	95	93.262	Oryzias_latipes
ENSAOCG00000007806	-	100	94.881	ENSORLG00000022739	-	95	94.881	Oryzias_latipes
ENSAOCG00000007806	-	100	94.539	ENSORLG00020006124	-	95	94.539	Oryzias_latipes_hni
ENSAOCG00000007806	-	96	93.262	ENSORLG00020012671	pcbp3	93	93.262	Oryzias_latipes_hni
ENSAOCG00000007806	-	96	93.262	ENSORLG00015000429	pcbp3	93	93.262	Oryzias_latipes_hsok
ENSAOCG00000007806	-	99	93.151	ENSORLG00015008051	-	93	93.151	Oryzias_latipes_hsok
ENSAOCG00000007806	-	99	91.753	ENSOMEG00000020811	pcbp3	96	91.753	Oryzias_melastigma
ENSAOCG00000007806	-	100	94.198	ENSOMEG00000020162	-	95	94.198	Oryzias_melastigma
ENSAOCG00000007806	-	100	83.436	ENSOGAG00000008044	-	96	83.436	Otolemur_garnettii
ENSAOCG00000007806	-	77	87.342	ENSPKIG00000020913	-	71	87.342	Paramormyrops_kingsleyae
ENSAOCG00000007806	-	100	94.198	ENSPKIG00000019329	pcbp3	90	94.681	Paramormyrops_kingsleyae
ENSAOCG00000007806	-	100	81.605	ENSPSIG00000014970	-	96	82.274	Pelodiscus_sinensis
ENSAOCG00000007806	-	82	76.806	ENSPSIG00000008350	-	69	76.806	Pelodiscus_sinensis
ENSAOCG00000007806	-	96	85.855	ENSPMGG00000022383	pcbp3	91	85.855	Periophthalmus_magnuspinnatus
ENSAOCG00000007806	-	82	87.742	ENSPMAG00000004637	-	93	87.742	Petromyzon_marinus
ENSAOCG00000007806	-	99	71.233	ENSPMAG00000004551	pcbp3	81	71.233	Petromyzon_marinus
ENSAOCG00000007806	-	100	85.759	ENSPCIG00000028092	-	87	96.471	Phascolarctos_cinereus
ENSAOCG00000007806	-	100	96.928	ENSPLAG00000004074	-	84	96.928	Poecilia_latipinna
ENSAOCG00000007806	-	100	84.424	ENSPLAG00000011449	pcbp3	82	84.424	Poecilia_latipinna
ENSAOCG00000007806	-	100	84.127	ENSPMEG00000021239	pcbp3	83	85.855	Poecilia_mexicana
ENSAOCG00000007806	-	100	93.115	ENSPMEG00000006653	-	91	93.115	Poecilia_mexicana
ENSAOCG00000007806	-	100	94.881	ENSPREG00000020585	-	88	98.830	Poecilia_reticulata
ENSAOCG00000007806	-	96	93.262	ENSPREG00000015736	pcbp3	88	93.262	Poecilia_reticulata
ENSAOCG00000007806	-	100	94.539	ENSPNYG00000013205	-	90	94.539	Pundamilia_nyererei
ENSAOCG00000007806	-	96	92.908	ENSPNYG00000012326	pcbp3	83	92.908	Pundamilia_nyererei
ENSAOCG00000007806	-	96	91.071	ENSPNAG00000008541	-	88	91.071	Pygocentrus_nattereri
ENSAOCG00000007806	-	100	94.539	ENSPNAG00000015104	pcbp3	95	94.539	Pygocentrus_nattereri
ENSAOCG00000007806	-	100	92.491	ENSRNOG00000001245	Pcbp3	96	92.491	Rattus_norvegicus
ENSAOCG00000007806	-	100	84.564	ENSRBIG00000028177	-	88	78.049	Rhinopithecus_bieti
ENSAOCG00000007806	-	100	91.667	ENSSHAG00000007890	-	96	91.667	Sarcophilus_harrisii
ENSAOCG00000007806	-	100	81.507	ENSSFOG00015007118	-	86	81.507	Scleropages_formosus
ENSAOCG00000007806	-	97	95.035	ENSSFOG00015010205	pcbp3	90	95.035	Scleropages_formosus
ENSAOCG00000007806	-	97	86.230	ENSSFOG00015014706	pcbp3	84	86.230	Scleropages_formosus
ENSAOCG00000007806	-	96	93.262	ENSSMAG00000011929	pcbp3	87	93.262	Scophthalmus_maximus
ENSAOCG00000007806	-	100	94.539	ENSSMAG00000003135	-	95	94.539	Scophthalmus_maximus
ENSAOCG00000007806	-	97	90.210	ENSSDUG00000008502	-	84	90.210	Seriola_dumerili
ENSAOCG00000007806	-	96	86.184	ENSSDUG00000011608	pcbp3	89	86.184	Seriola_dumerili
ENSAOCG00000007806	-	96	86.184	ENSSLDG00000008518	pcbp3	89	86.184	Seriola_lalandi_dorsalis
ENSAOCG00000007806	-	97	95.053	ENSSLDG00000020161	-	91	95.053	Seriola_lalandi_dorsalis
ENSAOCG00000007806	-	95	79.000	ENSSPUG00000013214	-	91	79.000	Sphenodon_punctatus
ENSAOCG00000007806	-	97	73.529	ENSSPAG00000023341	-	84	73.529	Stegastes_partitus
ENSAOCG00000007806	-	100	99.658	ENSSPAG00000004190	-	100	99.658	Stegastes_partitus
ENSAOCG00000007806	-	99	91.246	ENSTGUG00000003316	-	88	91.246	Taeniopygia_guttata
ENSAOCG00000007806	-	100	85.324	ENSTGUG00000008158	-	96	85.324	Taeniopygia_guttata
ENSAOCG00000007806	-	97	89.189	ENSTRUG00000013604	pcbp3	79	98.710	Takifugu_rubripes
ENSAOCG00000007806	-	100	94.881	ENSTRUG00000006280	-	89	94.881	Takifugu_rubripes
ENSAOCG00000007806	-	100	84.211	ENSTTRG00000015075	-	96	84.211	Tursiops_truncatus
ENSAOCG00000007806	-	97	73.252	ENSXETG00000010491	pcbp2	70	73.252	Xenopus_tropicalis
ENSAOCG00000007806	-	100	89.037	ENSXETG00000011483	pcbp1	96	89.037	Xenopus_tropicalis
ENSAOCG00000007806	-	96	85.855	ENSXCOG00000020481	pcbp3	83	85.855	Xiphophorus_couchianus
ENSAOCG00000007806	-	97	85.621	ENSXMAG00000008175	pcbp3	91	85.621	Xiphophorus_maculatus
ENSAOCG00000007806	-	97	95.053	ENSXMAG00000028711	-	91	95.053	Xiphophorus_maculatus