EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000007887 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 39409 bases
Position: chrNXFZ01002111.1:182896-222304
Accession: 111567786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000022361	La	PF05383.17	1.4e-14	1	1
ENSAOCP00000022370	La	PF05383.17	8.4e-14	1	1
ENSAOCP00000022377	La	PF05383.17	1e-13	1	1
ENSAOCP00000004429	La	PF05383.17	9.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000008079	-	1914	-	ENSAOCP00000004429	637 (aa)	-	-
ENSAOCT00000008114	-	2136	-	ENSAOCP00000022377	711 (aa)	-	-
ENSAOCT00000008157	-	579	-	ENSAOCP00000022361	192 (aa)	-	-
ENSAOCT00000008133	-	1898	XM_023269089	ENSAOCP00000022370	559 (aa)	XP_023124857	-

Gene Model

Click here to download ENSAOCG00000007887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000007887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000007887	-	83	58.642	ENSAOCG00000006387	larp4ab	88	36.471
ENSAOCG00000007887	-	77	63.576	ENSAOCG00000002408	larp4aa	65	39.560

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000007887	-	79	84.106	ENSG00000107929	LARP4B	100	50.877	Homo_sapiens
ENSAOCG00000007887	-	67	66.406	ENSAPOG00000020631	-	61	61.224	Acanthochromis_polyacanthus
ENSAOCG00000007887	-	100	98.032	ENSAPOG00000020531	LARP4B	95	98.032	Acanthochromis_polyacanthus
ENSAOCG00000007887	-	79	81.457	ENSAMEG00000001810	LARP4B	93	53.398	Ailuropoda_melanoleuca
ENSAOCG00000007887	-	100	89.886	ENSAPEG00000002512	LARP4B	94	78.434	Amphiprion_percula
ENSAOCG00000007887	-	78	94.631	ENSATEG00000012614	LARP4B	98	72.418	Anabas_testudineus
ENSAOCG00000007887	-	78	87.500	ENSAPLG00000003813	LARP4B	92	56.906	Anas_platyrhynchos
ENSAOCG00000007887	-	76	89.655	ENSACAG00000002858	LARP4B	96	55.249	Anolis_carolinensis
ENSAOCG00000007887	-	79	84.106	ENSANAG00000007531	-	87	56.575	Aotus_nancymaae
ENSAOCG00000007887	-	100	89.631	ENSACLG00000026356	LARP4B	98	74.661	Astatotilapia_calliptera
ENSAOCG00000007887	-	69	84.211	ENSAMXG00000003335	larp4b	92	51.101	Astyanax_mexicanus
ENSAOCG00000007887	-	79	84.768	ENSBTAG00000013899	LARP4B	93	55.142	Bos_taurus
ENSAOCG00000007887	-	78	86.667	ENSCJAG00000018434	LARP4B	87	56.728	Callithrix_jacchus
ENSAOCG00000007887	-	79	84.768	ENSCAFG00020004209	LARP4B	93	54.937	Canis_lupus_dingo
ENSAOCG00000007887	-	79	84.106	ENSCHIG00000013543	LARP4B	88	56.031	Capra_hircus
ENSAOCG00000007887	-	78	87.248	ENSTSYG00000002568	LARP4B	92	62.387	Carlito_syrichta
ENSAOCG00000007887	-	78	82.667	ENSCAPG00000009725	LARP4B	75	55.235	Cavia_aperea
ENSAOCG00000007887	-	78	83.221	ENSCPOG00000009375	LARP4B	87	56.308	Cavia_porcellus
ENSAOCG00000007887	-	78	86.000	ENSCCAG00000024869	LARP4B	87	56.575	Cebus_capucinus
ENSAOCG00000007887	-	79	85.430	ENSCATG00000019750	LARP4B	87	57.362	Cercocebus_atys
ENSAOCG00000007887	-	79	84.768	ENSCLAG00000011570	LARP4B	91	55.821	Chinchilla_lanigera
ENSAOCG00000007887	-	79	86.842	ENSCPBG00000017063	LARP4B	90	58.006	Chrysemys_picta_bellii
ENSAOCG00000007887	-	76	88.356	ENSCANG00000038021	LARP4B	86	57.740	Colobus_angolensis_palliatus
ENSAOCG00000007887	-	79	84.768	ENSCGRG00001022930	Larp4b	86	61.391	Cricetulus_griseus_chok1gshd
ENSAOCG00000007887	-	79	84.768	ENSCGRG00000006022	Larp4b	86	61.391	Cricetulus_griseus_crigri
ENSAOCG00000007887	-	91	85.687	ENSCSEG00000007342	LARP4B	100	67.728	Cynoglossus_semilaevis
ENSAOCG00000007887	-	67	59.690	ENSCSEG00000001202	-	92	57.246	Cynoglossus_semilaevis
ENSAOCG00000007887	-	95	89.850	ENSCVAG00000008910	LARP4B	98	71.332	Cyprinodon_variegatus
ENSAOCG00000007887	-	81	76.774	ENSDARG00000062146	larp4b	95	51.778	Danio_rerio
ENSAOCG00000007887	-	79	84.106	ENSDNOG00000045543	-	100	62.302	Dasypus_novemcinctus
ENSAOCG00000007887	-	76	86.986	ENSDORG00000009328	Larp4b	86	59.240	Dipodomys_ordii
ENSAOCG00000007887	-	56	85.185	ENSETEG00000011249	LARP4B	83	54.678	Echinops_telfairi
ENSAOCG00000007887	-	79	84.106	ENSEASG00005019068	-	93	53.686	Equus_asinus_asinus
ENSAOCG00000007887	-	79	84.106	ENSECAG00000024040	LARP4B	93	53.964	Equus_caballus
ENSAOCG00000007887	-	79	85.430	ENSEEUG00000008391	LARP4B	86	54.587	Erinaceus_europaeus
ENSAOCG00000007887	-	99	68.976	ENSELUG00000008626	LARP4B	98	61.727	Esox_lucius
ENSAOCG00000007887	-	74	70.833	ENSELUG00000001417	-	88	40.765	Esox_lucius
ENSAOCG00000007887	-	79	84.768	ENSFCAG00000000721	-	93	53.814	Felis_catus
ENSAOCG00000007887	-	78	87.500	ENSFALG00000006961	LARP4B	90	59.242	Ficedula_albicollis
ENSAOCG00000007887	-	79	84.768	ENSFDAG00000006158	LARP4B	84	57.580	Fukomys_damarensis
ENSAOCG00000007887	-	89	84.971	ENSFHEG00000013037	LARP4B	65	98.319	Fundulus_heteroclitus
ENSAOCG00000007887	-	78	57.718	ENSFHEG00000011539	-	77	42.582	Fundulus_heteroclitus
ENSAOCG00000007887	-	79	90.789	ENSGMOG00000010818	-	73	79.790	Gadus_morhua
ENSAOCG00000007887	-	78	87.500	ENSGALG00000006672	LARP4B	90	58.069	Gallus_gallus
ENSAOCG00000007887	-	79	90.066	ENSGAFG00000002038	-	70	85.532	Gambusia_affinis
ENSAOCG00000007887	-	99	76.080	ENSGACG00000017535	LARP4B	91	70.963	Gasterosteus_aculeatus
ENSAOCG00000007887	-	79	86.842	ENSGAGG00000008598	LARP4B	96	56.296	Gopherus_agassizii
ENSAOCG00000007887	-	79	84.106	ENSGGOG00000003572	LARP4B	87	56.902	Gorilla_gorilla
ENSAOCG00000007887	-	100	90.925	ENSHBUG00000007535	LARP4B	98	73.848	Haplochromis_burtoni
ENSAOCG00000007887	-	79	84.768	ENSHGLG00000012936	LARP4B	85	64.865	Heterocephalus_glaber_female
ENSAOCG00000007887	-	73	76.596	ENSHGLG00100017261	-	93	54.196	Heterocephalus_glaber_male
ENSAOCG00000007887	-	79	84.768	ENSHGLG00100016220	-	86	57.822	Heterocephalus_glaber_male
ENSAOCG00000007887	-	77	91.837	ENSHCOG00000011581	LARP4B	89	65.339	Hippocampus_comes
ENSAOCG00000007887	-	69	85.714	ENSIPUG00000009705	larp4b	91	52.044	Ictalurus_punctatus
ENSAOCG00000007887	-	79	84.768	ENSSTOG00000000587	LARP4B	92	64.595	Ictidomys_tridecemlineatus
ENSAOCG00000007887	-	77	86.395	ENSJJAG00000020847	Larp4b	87	56.528	Jaculus_jaculus
ENSAOCG00000007887	-	99	89.964	ENSKMAG00000021674	LARP4B	96	76.151	Kryptolebias_marmoratus
ENSAOCG00000007887	-	99	78.880	ENSLBEG00000025293	-	82	81.788	Labrus_bergylta
ENSAOCG00000007887	-	78	84.106	ENSLACG00000009492	LARP4B	98	54.314	Latimeria_chalumnae
ENSAOCG00000007887	-	96	67.330	ENSLOCG00000012290	larp4b	93	59.758	Lepisosteus_oculatus
ENSAOCG00000007887	-	78	86.000	ENSLAFG00000015334	LARP4B	99	54.039	Loxodonta_africana
ENSAOCG00000007887	-	79	85.430	ENSMFAG00000001766	LARP4B	86	57.562	Macaca_fascicularis
ENSAOCG00000007887	-	79	85.430	ENSMMUG00000005279	LARP4B	87	57.362	Macaca_mulatta
ENSAOCG00000007887	-	79	85.430	ENSMNEG00000014019	LARP4B	86	57.585	Macaca_nemestrina
ENSAOCG00000007887	-	79	85.430	ENSMLEG00000035198	LARP4B	87	57.252	Mandrillus_leucophaeus
ENSAOCG00000007887	-	100	90.244	ENSMAMG00000013742	LARP4B	98	70.558	Mastacembelus_armatus
ENSAOCG00000007887	-	94	93.536	ENSMZEG00005006498	-	95	93.032	Maylandia_zebra
ENSAOCG00000007887	-	92	80.420	ENSMZEG00005014594	-	100	73.278	Maylandia_zebra
ENSAOCG00000007887	-	78	87.500	ENSMGAG00000005472	LARP4B	87	58.030	Meleagris_gallopavo
ENSAOCG00000007887	-	79	84.768	ENSMAUG00000021657	Larp4b	86	61.618	Mesocricetus_auratus
ENSAOCG00000007887	-	79	84.768	ENSMICG00000001301	LARP4B	91	56.753	Microcebus_murinus
ENSAOCG00000007887	-	79	84.768	ENSMOCG00000021452	Larp4b	86	60.757	Microtus_ochrogaster
ENSAOCG00000007887	-	77	94.558	ENSMMOG00000011253	-	89	78.000	Mola_mola
ENSAOCG00000007887	-	75	85.417	ENSMODG00000005957	LARP4B	96	53.635	Monodelphis_domestica
ENSAOCG00000007887	-	89	81.873	ENSMALG00000012432	LARP4B	100	65.564	Monopterus_albus
ENSAOCG00000007887	-	79	84.768	MGP_CAROLIEiJ_G0018216	Larp4b	86	61.831	Mus_caroli
ENSAOCG00000007887	-	79	84.768	ENSMUSG00000033499	Larp4b	86	61.618	Mus_musculus
ENSAOCG00000007887	-	79	84.768	MGP_PahariEiJ_G0019266	Larp4b	86	61.313	Mus_pahari
ENSAOCG00000007887	-	79	84.768	MGP_SPRETEiJ_G0019074	Larp4b	86	61.790	Mus_spretus
ENSAOCG00000007887	-	79	84.768	ENSMPUG00000016220	LARP4B	90	54.393	Mustela_putorius_furo
ENSAOCG00000007887	-	79	84.106	ENSMLUG00000005880	LARP4B	94	55.435	Myotis_lucifugus
ENSAOCG00000007887	-	79	84.106	ENSNGAG00000001750	Larp4b	87	56.221	Nannospalax_galili
ENSAOCG00000007887	-	94	76.316	ENSNBRG00000020018	LARP4B	90	73.127	Neolamprologus_brichardi
ENSAOCG00000007887	-	79	84.768	ENSNLEG00000013442	LARP4B	87	57.055	Nomascus_leucogenys
ENSAOCG00000007887	-	78	48.341	ENSMEUG00000013114	-	77	48.341	Notamacropus_eugenii
ENSAOCG00000007887	-	79	82.119	ENSOPRG00000003300	LARP4B	87	53.111	Ochotona_princeps
ENSAOCG00000007887	-	100	51.954	ENSODEG00000001109	LARP4B	92	56.873	Octodon_degus
ENSAOCG00000007887	-	100	80.929	ENSONIG00000017705	LARP4B	98	73.781	Oreochromis_niloticus
ENSAOCG00000007887	-	78	86.928	ENSOANG00000006100	LARP4B	94	53.472	Ornithorhynchus_anatinus
ENSAOCG00000007887	-	79	83.444	ENSOCUG00000004950	LARP4B	84	55.075	Oryctolagus_cuniculus
ENSAOCG00000007887	-	99	77.958	ENSORLG00000006080	LARP4B	98	70.619	Oryzias_latipes
ENSAOCG00000007887	-	99	86.762	ENSORLG00020020940	LARP4B	98	71.060	Oryzias_latipes_hni
ENSAOCG00000007887	-	99	86.404	ENSORLG00015020608	LARP4B	98	70.845	Oryzias_latipes_hsok
ENSAOCG00000007887	-	99	85.536	ENSOMEG00000019619	LARP4B	98	69.796	Oryzias_melastigma
ENSAOCG00000007887	-	79	86.755	ENSOGAG00000011540	LARP4B	92	56.636	Otolemur_garnettii
ENSAOCG00000007887	-	79	84.106	ENSOARG00000015320	LARP4B	86	55.775	Ovis_aries
ENSAOCG00000007887	-	79	84.106	ENSPPAG00000039232	LARP4B	87	56.902	Pan_paniscus
ENSAOCG00000007887	-	79	84.768	ENSPPRG00000009489	LARP4B	93	53.814	Panthera_pardus
ENSAOCG00000007887	-	79	84.768	ENSPTIG00000008543	LARP4B	93	53.825	Panthera_tigris_altaica
ENSAOCG00000007887	-	79	84.106	ENSPTRG00000002235	LARP4B	87	56.902	Pan_troglodytes
ENSAOCG00000007887	-	79	85.430	ENSPANG00000023546	LARP4B	86	57.562	Papio_anubis
ENSAOCG00000007887	-	77	83.673	ENSPKIG00000012368	LARP4B	95	53.878	Paramormyrops_kingsleyae
ENSAOCG00000007887	-	79	86.842	ENSPSIG00000005600	LARP4B	99	70.497	Pelodiscus_sinensis
ENSAOCG00000007887	-	99	65.255	ENSPMGG00000008261	LARP4B	88	67.863	Periophthalmus_magnuspinnatus
ENSAOCG00000007887	-	66	51.969	ENSPMGG00000023487	-	74	49.600	Periophthalmus_magnuspinnatus
ENSAOCG00000007887	-	79	84.768	ENSPEMG00000014052	Larp4b	87	55.657	Peromyscus_maniculatus_bairdii
ENSAOCG00000007887	-	99	78.768	ENSPFOG00000000029	LARP4B	98	70.458	Poecilia_formosa
ENSAOCG00000007887	-	99	78.768	ENSPLAG00000002871	LARP4B	98	73.796	Poecilia_latipinna
ENSAOCG00000007887	-	99	87.500	ENSPMEG00000016361	LARP4B	98	71.294	Poecilia_mexicana
ENSAOCG00000007887	-	79	84.768	ENSPPYG00000002035	LARP4B	84	57.274	Pongo_abelii
ENSAOCG00000007887	-	79	85.430	ENSPCOG00000014688	LARP4B	86	57.121	Propithecus_coquereli
ENSAOCG00000007887	-	78	66.443	ENSPVAG00000009784	LARP4B	78	55.376	Pteropus_vampyrus
ENSAOCG00000007887	-	100	89.982	ENSPNYG00000024252	LARP4B	98	74.797	Pundamilia_nyererei
ENSAOCG00000007887	-	69	85.714	ENSPNAG00000028956	larp4b	92	51.339	Pygocentrus_nattereri
ENSAOCG00000007887	-	79	84.768	ENSRNOG00000015888	Larp4b	93	57.962	Rattus_norvegicus
ENSAOCG00000007887	-	79	85.430	ENSRBIG00000033294	LARP4B	87	57.362	Rhinopithecus_bieti
ENSAOCG00000007887	-	79	85.430	ENSRROG00000033879	LARP4B	87	57.362	Rhinopithecus_roxellana
ENSAOCG00000007887	-	96	54.058	ENSSBOG00000021109	LARP4B	86	51.698	Saimiri_boliviensis_boliviensis
ENSAOCG00000007887	-	96	64.418	ENSSHAG00000013392	LARP4B	89	58.040	Sarcophilus_harrisii
ENSAOCG00000007887	-	80	84.314	ENSSFOG00015003256	LARP4B	87	57.571	Scleropages_formosus
ENSAOCG00000007887	-	99	80.524	ENSSMAG00000005982	-	84	91.133	Scophthalmus_maximus
ENSAOCG00000007887	-	99	92.870	ENSSDUG00000006704	LARP4B	98	75.372	Seriola_dumerili
ENSAOCG00000007887	-	91	83.430	ENSSLDG00000020660	LARP4B	94	78.268	Seriola_lalandi_dorsalis
ENSAOCG00000007887	-	66	85.981	ENSSARG00000001243	-	72	85.981	Sorex_araneus
ENSAOCG00000007887	-	95	70.879	ENSSPUG00000002102	-	79	70.956	Sphenodon_punctatus
ENSAOCG00000007887	-	73	89.286	ENSSPUG00000013734	-	78	66.422	Sphenodon_punctatus
ENSAOCG00000007887	-	92	88.202	ENSSPAG00000014628	LARP4B	100	75.708	Stegastes_partitus
ENSAOCG00000007887	-	79	84.106	ENSSSCG00000011162	LARP4B	99	59.902	Sus_scrofa
ENSAOCG00000007887	-	78	87.500	ENSTGUG00000000811	-	89	58.359	Taeniopygia_guttata
ENSAOCG00000007887	-	70	94.776	ENSTGUG00000013982	-	100	94.776	Taeniopygia_guttata
ENSAOCG00000007887	-	99	70.952	ENSTNIG00000007991	LARP4B	96	66.766	Tetraodon_nigroviridis
ENSAOCG00000007887	-	99	73.214	ENSTNIG00000004571	-	92	68.663	Tetraodon_nigroviridis
ENSAOCG00000007887	-	79	84.106	ENSTTRG00000011151	LARP4B	68	61.034	Tursiops_truncatus
ENSAOCG00000007887	-	79	84.768	ENSUAMG00000016461	LARP4B	86	60.201	Ursus_americanus
ENSAOCG00000007887	-	79	84.768	ENSUMAG00000016127	LARP4B	93	54.381	Ursus_maritimus
ENSAOCG00000007887	-	77	82.993	ENSVPAG00000000128	-	64	87.079	Vicugna_pacos
ENSAOCG00000007887	-	79	84.768	ENSVVUG00000008641	LARP4B	92	58.199	Vulpes_vulpes
ENSAOCG00000007887	-	76	88.276	ENSXETG00000016882	larp4b	93	56.734	Xenopus_tropicalis
ENSAOCG00000007887	-	94	75.342	ENSXCOG00000019952	LARP4B	96	69.492	Xiphophorus_couchianus
ENSAOCG00000007887	-	99	86.477	ENSXMAG00000021533	LARP4B	98	70.636	Xiphophorus_maculatus