EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000007992 (Gene tree)
Gene ID: 111562564
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 3160 bases
Position: chrNXFZ01006161.1:128104-131263
Accession: 111562564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000004579	RRM_5	PF13893.6	3.6e-10	1	2
ENSAOCP00000004579	RRM_5	PF13893.6	3.6e-10	2	2
ENSAOCP00000004579	RRM_1	PF00076.22	1.6e-26	1	2
ENSAOCP00000004579	RRM_1	PF00076.22	1.6e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000007804	-	1659	XM_023261151	ENSAOCP00000004579	340 (aa)	XP_023116919	UPI000C3123EE

Gene Model

Click here to download ENSAOCG00000007992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000007992's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000007992	rbm4.3	92	56.688	ENSAOCG00000010915	rbm4.1	61	57.237
ENSAOCG00000007992	rbm4.3	96	69.139	ENSAOCG00000008015	rbm4.3	97	71.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000007992	rbm4.3	100	93.842	ENSAPOG00000002991	rbm4.3	100	94.428	Acanthochromis_polyacanthus
ENSAOCG00000007992	rbm4.3	96	69.231	ENSAPOG00000002953	rbm4.3	97	71.006	Acanthochromis_polyacanthus
ENSAOCG00000007992	rbm4.3	96	65.385	ENSACIG00000021311	-	97	67.456	Amphilophus_citrinellus
ENSAOCG00000007992	rbm4.3	100	86.006	ENSACIG00000021295	rbm4.3	100	86.589	Amphilophus_citrinellus
ENSAOCG00000007992	rbm4.3	100	99.706	ENSAPEG00000017288	rbm4.3	100	99.706	Amphiprion_percula
ENSAOCG00000007992	rbm4.3	96	70.833	ENSAPEG00000017324	rbm4.3	97	71.131	Amphiprion_percula
ENSAOCG00000007992	rbm4.3	96	68.843	ENSATEG00000019375	rbm4.3	97	70.623	Anabas_testudineus
ENSAOCG00000007992	rbm4.3	96	84.940	ENSATEG00000019395	rbm4.3	96	83.735	Anabas_testudineus
ENSAOCG00000007992	rbm4.3	96	85.152	ENSACLG00000010642	rbm4.3	100	84.638	Astatotilapia_calliptera
ENSAOCG00000007992	rbm4.3	99	66.667	ENSACLG00000010620	-	97	68.343	Astatotilapia_calliptera
ENSAOCG00000007992	rbm4.3	53	76.536	ENSAMXG00000040224	rbm4.3	73	74.860	Astyanax_mexicanus
ENSAOCG00000007992	rbm4.3	99	61.714	ENSCSEG00000013659	rbm4.3	97	65.782	Cynoglossus_semilaevis
ENSAOCG00000007992	rbm4.3	100	76.590	ENSCVAG00000008502	rbm4.3	100	78.035	Cyprinodon_variegatus
ENSAOCG00000007992	rbm4.3	96	62.941	ENSCVAG00000008508	rbm4.3	97	63.529	Cyprinodon_variegatus
ENSAOCG00000007992	rbm4.3	95	72.424	ENSDARG00000022129	rbm4.3	99	71.014	Danio_rerio
ENSAOCG00000007992	rbm4.3	98	69.341	ENSELUG00000022168	rbm4.3	97	70.958	Esox_lucius
ENSAOCG00000007992	rbm4.3	99	67.045	ENSELUG00000022150	rbm4.3	99	66.667	Esox_lucius
ENSAOCG00000007992	rbm4.3	99	66.571	ENSELUG00000022155	rbm4.3	97	69.118	Esox_lucius
ENSAOCG00000007992	rbm4.3	80	65.704	ENSFHEG00000023137	rbm4.3	87	65.704	Fundulus_heteroclitus
ENSAOCG00000007992	rbm4.3	100	72.238	ENSFHEG00000023096	rbm4.3	100	73.654	Fundulus_heteroclitus
ENSAOCG00000007992	rbm4.3	96	74.030	ENSGAFG00000001935	rbm4.3	97	72.836	Gambusia_affinis
ENSAOCG00000007992	rbm4.3	100	74.212	ENSGACG00000019980	rbm4.3	100	75.358	Gasterosteus_aculeatus
ENSAOCG00000007992	rbm4.3	96	85.152	ENSHBUG00000009051	rbm4.3	100	84.638	Haplochromis_burtoni
ENSAOCG00000007992	rbm4.3	99	66.667	ENSHBUG00000009020	-	97	68.343	Haplochromis_burtoni
ENSAOCG00000007992	rbm4.3	100	67.622	ENSHCOG00000010363	rbm4.3	94	69.643	Hippocampus_comes
ENSAOCG00000007992	rbm4.3	95	62.349	ENSHCOG00000010349	rbm4.3	96	63.018	Hippocampus_comes
ENSAOCG00000007992	rbm4.3	99	67.049	ENSIPUG00000022943	RBM4B	99	66.092	Ictalurus_punctatus
ENSAOCG00000007992	rbm4.3	98	61.471	ENSKMAG00000017468	rbm4.3	97	61.493	Kryptolebias_marmoratus
ENSAOCG00000007992	rbm4.3	96	74.251	ENSKMAG00000014541	rbm4.3	95	73.433	Kryptolebias_marmoratus
ENSAOCG00000007992	rbm4.3	55	87.831	ENSLBEG00000001025	rbm4.3	85	87.634	Labrus_bergylta
ENSAOCG00000007992	rbm4.3	96	67.160	ENSLBEG00000001071	-	97	69.231	Labrus_bergylta
ENSAOCG00000007992	rbm4.3	95	56.354	ENSLOCG00000002755	rbm4.3	99	57.029	Lepisosteus_oculatus
ENSAOCG00000007992	rbm4.3	96	68.546	ENSMAMG00000004715	-	81	70.326	Mastacembelus_armatus
ENSAOCG00000007992	rbm4.3	96	84.545	ENSMAMG00000004701	rbm4.3	96	83.939	Mastacembelus_armatus
ENSAOCG00000007992	rbm4.3	96	85.152	ENSMZEG00005028540	rbm4.3	100	84.638	Maylandia_zebra
ENSAOCG00000007992	rbm4.3	99	62.644	ENSMZEG00005007417	-	97	64.201	Maylandia_zebra
ENSAOCG00000007992	rbm4.3	84	63.851	ENSMZEG00005028537	-	83	65.541	Maylandia_zebra
ENSAOCG00000007992	rbm4.3	85	86.207	ENSMZEG00005007441	rbm4.3	79	86.159	Maylandia_zebra
ENSAOCG00000007992	rbm4.3	96	77.246	ENSMMOG00000012191	rbm4.3	96	78.144	Mola_mola
ENSAOCG00000007992	rbm4.3	100	80.523	ENSMALG00000015014	-	100	79.360	Monopterus_albus
ENSAOCG00000007992	rbm4.3	86	67.550	ENSMALG00000003001	rbm4.3	87	70.946	Monopterus_albus
ENSAOCG00000007992	rbm4.3	90	80.645	ENSMALG00000003032	rbm4.3	95	79.355	Monopterus_albus
ENSAOCG00000007992	rbm4.3	100	84.012	ENSNBRG00000012372	rbm4.3	100	84.012	Neolamprologus_brichardi
ENSAOCG00000007992	rbm4.3	100	83.621	ENSONIG00000018378	rbm4.3	100	82.759	Oreochromis_niloticus
ENSAOCG00000007992	rbm4.3	99	66.667	ENSONIG00000018380	-	97	68.343	Oreochromis_niloticus
ENSAOCG00000007992	rbm4.3	100	69.653	ENSORLG00000024749	rbm4.3	100	70.231	Oryzias_latipes
ENSAOCG00000007992	rbm4.3	96	58.430	ENSORLG00000011589	rbm4.3	97	58.140	Oryzias_latipes
ENSAOCG00000007992	rbm4.3	96	57.558	ENSORLG00000012473	rbm4.3	97	57.267	Oryzias_latipes
ENSAOCG00000007992	rbm4.3	96	58.140	ENSORLG00020012474	rbm4.3	97	57.849	Oryzias_latipes_hni
ENSAOCG00000007992	rbm4.3	100	70.058	ENSORLG00020012482	rbm4.3	100	70.640	Oryzias_latipes_hni
ENSAOCG00000007992	rbm4.3	96	57.558	ENSORLG00020012464	rbm4.3	97	57.267	Oryzias_latipes_hni
ENSAOCG00000007992	rbm4.3	96	56.977	ENSORLG00015013698	rbm4.3	97	57.849	Oryzias_latipes_hsok
ENSAOCG00000007992	rbm4.3	96	56.977	ENSORLG00015013686	rbm4.3	97	56.686	Oryzias_latipes_hsok
ENSAOCG00000007992	rbm4.3	100	70.349	ENSORLG00015013721	rbm4.3	100	71.221	Oryzias_latipes_hsok
ENSAOCG00000007992	rbm4.3	100	72.674	ENSOMEG00000005950	rbm4.3	100	72.674	Oryzias_melastigma
ENSAOCG00000007992	rbm4.3	99	59.437	ENSOMEG00000005918	rbm4.3	97	59.130	Oryzias_melastigma
ENSAOCG00000007992	rbm4.3	96	57.681	ENSOMEG00000005929	rbm4.3	97	58.261	Oryzias_melastigma
ENSAOCG00000007992	rbm4.3	100	66.572	ENSPKIG00000007001	rbm4.3	100	63.248	Paramormyrops_kingsleyae
ENSAOCG00000007992	rbm4.3	100	76.571	ENSPLAG00000006077	rbm4.3	100	76.857	Poecilia_latipinna
ENSAOCG00000007992	rbm4.3	99	62.216	ENSPLAG00000006131	rbm4.3	97	62.059	Poecilia_latipinna
ENSAOCG00000007992	rbm4.3	100	77.077	ENSPMEG00000024260	rbm4.3	100	77.364	Poecilia_mexicana
ENSAOCG00000007992	rbm4.3	96	62.463	ENSPMEG00000024263	rbm4.3	97	60.819	Poecilia_mexicana
ENSAOCG00000007992	rbm4.3	99	62.216	ENSPMEG00000024271	rbm4.3	97	61.765	Poecilia_mexicana
ENSAOCG00000007992	rbm4.3	99	61.383	ENSPREG00000002156	rbm4.3	97	60.000	Poecilia_reticulata
ENSAOCG00000007992	rbm4.3	100	75.645	ENSPREG00000002093	-	100	76.504	Poecilia_reticulata
ENSAOCG00000007992	rbm4.3	96	84.290	ENSPNYG00000018564	rbm4.3	100	83.237	Pundamilia_nyererei
ENSAOCG00000007992	rbm4.3	99	66.667	ENSPNYG00000018541	rbm4.3	97	68.343	Pundamilia_nyererei
ENSAOCG00000007992	rbm4.3	98	64.146	ENSPNAG00000013053	rbm4.3	97	64.756	Pygocentrus_nattereri
ENSAOCG00000007992	rbm4.3	98	63.202	ENSSFOG00015015563	rbm4.3	97	61.582	Scleropages_formosus
ENSAOCG00000007992	rbm4.3	96	76.577	ENSSMAG00000013653	rbm4.3	96	76.877	Scophthalmus_maximus
ENSAOCG00000007992	rbm4.3	96	68.935	ENSSMAG00000013644	rbm4.3	97	65.282	Scophthalmus_maximus
ENSAOCG00000007992	rbm4.3	96	68.843	ENSSDUG00000018435	rbm4.3	97	70.623	Seriola_dumerili
ENSAOCG00000007992	rbm4.3	100	85.217	ENSSDUG00000018422	rbm4.3	100	83.768	Seriola_dumerili
ENSAOCG00000007992	rbm4.3	100	84.638	ENSSLDG00000017182	rbm4.3	100	83.188	Seriola_lalandi_dorsalis
ENSAOCG00000007992	rbm4.3	96	68.843	ENSSLDG00000017204	rbm4.3	97	70.623	Seriola_lalandi_dorsalis
ENSAOCG00000007992	rbm4.3	99	69.452	ENSSPAG00000008062	rbm4.3	97	71.429	Stegastes_partitus
ENSAOCG00000007992	rbm4.3	100	91.813	ENSSPAG00000008041	rbm4.3	85	91.813	Stegastes_partitus
ENSAOCG00000007992	rbm4.3	96	78.743	ENSTRUG00000023874	rbm4.3	96	77.844	Takifugu_rubripes
ENSAOCG00000007992	rbm4.3	98	66.185	ENSTRUG00000020901	rbm4.3	97	67.257	Takifugu_rubripes
ENSAOCG00000007992	rbm4.3	98	64.223	ENSTNIG00000005668	rbm4.3	97	65.774	Tetraodon_nigroviridis
ENSAOCG00000007992	rbm4.3	96	62.170	ENSXCOG00000006001	rbm4.3	97	61.765	Xiphophorus_couchianus
ENSAOCG00000007992	rbm4.3	96	76.418	ENSXCOG00000005996	rbm4.3	97	77.015	Xiphophorus_couchianus
ENSAOCG00000007992	rbm4.3	96	75.964	ENSXMAG00000025173	rbm4.3	97	76.558	Xiphophorus_maculatus
ENSAOCG00000007992	rbm4.3	96	61.988	ENSXMAG00000021997	rbm4.3	97	61.471	Xiphophorus_maculatus
ENSAOCG00000007992	rbm4.3	99	63.068	ENSXMAG00000011698	rbm4.3	97	62.059	Xiphophorus_maculatus