EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000008056 (Gene tree)
Gene ID
111585420
Gene Symbol
trnau1apa
Alias
trnau1ap|zgc:110606
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Minus strand
Length
12461 bases
Position
chrNXFZ01001889.1:954847-967307
Accession
111585420
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000004634RRM_1PF00076.226.1e-2612
ENSAOCP00000004634RRM_1PF00076.226.1e-2622
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000007703-4457XM_023294901ENSAOCP00000004634306 (aa)XP_023150669UPI000C314663
Gene Model
Click here to download ENSAOCG00000008056's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000008056's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000008056trnau1apa9842.939ENSAOCG00000011891trnau1apb9842.815
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000008056trnau1apa9858.416ENSG00000180098TRNAU1AP9858.416Homo_sapiens
ENSAOCG00000008056trnau1apa10097.078ENSAPOG00000007148TRNAU1AP10097.078Acanthochromis_polyacanthus
ENSAOCG00000008056trnau1apa9858.416ENSAMEG00000011367TRNAU1AP9858.416Ailuropoda_melanoleuca
ENSAOCG00000008056trnau1apa10088.925ENSACIG00000004161trnau1apa10088.925Amphilophus_citrinellus
ENSAOCG00000008056trnau1apa100100.000ENSAPEG00000008868trnau1apa100100.000Amphiprion_percula
ENSAOCG00000008056trnau1apa10087.658ENSATEG00000012140trnau1apa10086.392Anabas_testudineus
ENSAOCG00000008056trnau1apa9260.490ENSAPLG00000002606TRNAU1AP9960.071Anas_platyrhynchos
ENSAOCG00000008056trnau1apa9450.000ENSACAG00000003995-9550.000Anolis_carolinensis
ENSAOCG00000008056trnau1apa7439.912ENSACAG00000004205-8638.776Anolis_carolinensis
ENSAOCG00000008056trnau1apa9858.416ENSANAG00000018976TRNAU1AP9858.416Aotus_nancymaae
ENSAOCG00000008056trnau1apa10089.902ENSACLG00000018515trnau1apa10089.902Astatotilapia_calliptera
ENSAOCG00000008056trnau1apa9271.591ENSAMXG00000029240-9571.591Astyanax_mexicanus
ENSAOCG00000008056trnau1apa9954.870ENSAMXG00000013750trnau1apa9753.896Astyanax_mexicanus
ENSAOCG00000008056trnau1apa9858.086ENSBTAG00000010393TRNAU1AP9858.086Bos_taurus
ENSAOCG00000008056trnau1apa9858.416ENSCJAG00000009717TRNAU1AP9858.416Callithrix_jacchus
ENSAOCG00000008056trnau1apa9858.416ENSCAFG00000011735TRNAU1AP9858.416Canis_familiaris
ENSAOCG00000008056trnau1apa9858.416ENSCAFG00020023584TRNAU1AP9858.416Canis_lupus_dingo
ENSAOCG00000008056trnau1apa9957.843ENSCHIG00000023215TRNAU1AP9957.843Capra_hircus
ENSAOCG00000008056trnau1apa9858.416ENSTSYG00000003506TRNAU1AP9858.416Carlito_syrichta
ENSAOCG00000008056trnau1apa9858.416ENSCPOG00000001925TRNAU1AP9858.416Cavia_porcellus
ENSAOCG00000008056trnau1apa9858.416ENSCCAG00000037506TRNAU1AP9858.416Cebus_capucinus
ENSAOCG00000008056trnau1apa9858.416ENSCATG00000044617TRNAU1AP9858.416Cercocebus_atys
ENSAOCG00000008056trnau1apa9858.416ENSCLAG00000008223TRNAU1AP9858.416Chinchilla_lanigera
ENSAOCG00000008056trnau1apa9858.416ENSCSAG00000001014TRNAU1AP9858.416Chlorocebus_sabaeus
ENSAOCG00000008056trnau1apa9458.362ENSCPBG00000000121TRNAU1AP9957.770Chrysemys_picta_bellii
ENSAOCG00000008056trnau1apa7031.799ENSCSAVG00000011781-8449.375Ciona_savignyi
ENSAOCG00000008056trnau1apa9850.495ENSCANG00000041949TRNAU1AP9852.308Colobus_angolensis_palliatus
ENSAOCG00000008056trnau1apa9858.416ENSCGRG00001004713Trnau1ap9858.416Cricetulus_griseus_chok1gshd
ENSAOCG00000008056trnau1apa9858.416ENSCGRG00000014532Trnau1ap9858.416Cricetulus_griseus_crigri
ENSAOCG00000008056trnau1apa10076.997ENSCSEG00000006663trnau1apa10075.080Cynoglossus_semilaevis
ENSAOCG00000008056trnau1apa9981.699ENSCVAG00000018069trnau1apa9983.660Cyprinodon_variegatus
ENSAOCG00000008056trnau1apa9951.148ENSDARG00000101323trnau1apa9551.148Danio_rerio
ENSAOCG00000008056trnau1apa5859.218ENSDNOG00000047959-9359.218Dasypus_novemcinctus
ENSAOCG00000008056trnau1apa9858.416ENSDNOG00000033009TRNAU1AP9858.416Dasypus_novemcinctus
ENSAOCG00000008056trnau1apa9756.856ENSDORG00000006349Trnau1ap9761.017Dipodomys_ordii
ENSAOCG00000008056trnau1apa9336.111FBgn0031607CG154405047.904Drosophila_melanogaster
ENSAOCG00000008056trnau1apa8455.814ENSETEG00000012594TRNAU1AP9855.814Echinops_telfairi
ENSAOCG00000008056trnau1apa5746.591ENSEBUG00000006349-5846.591Eptatretus_burgeri
ENSAOCG00000008056trnau1apa9858.416ENSEASG00005010062TRNAU1AP9068.493Equus_asinus_asinus
ENSAOCG00000008056trnau1apa9858.416ENSECAG00000012980TRNAU1AP9068.493Equus_caballus
ENSAOCG00000008056trnau1apa10074.839ENSELUG00000017686trnau1apa10077.170Esox_lucius
ENSAOCG00000008056trnau1apa9380.682ENSELUG00000022790-9580.682Esox_lucius
ENSAOCG00000008056trnau1apa9858.416ENSFCAG00000013401TRNAU1AP9858.416Felis_catus
ENSAOCG00000008056trnau1apa9458.362ENSFALG00000001371TRNAU1AP9957.931Ficedula_albicollis
ENSAOCG00000008056trnau1apa9958.170ENSFDAG00000018599TRNAU1AP9958.170Fukomys_damarensis
ENSAOCG00000008056trnau1apa7789.754ENSFHEG00000018232trnau1apa8588.327Fundulus_heteroclitus
ENSAOCG00000008056trnau1apa10067.949ENSGMOG00000016508trnau1apa9966.346Gadus_morhua
ENSAOCG00000008056trnau1apa6943.243ENSGALG00000012721C2H6orf529040.076Gallus_gallus
ENSAOCG00000008056trnau1apa9859.136ENSGALG00000001310-9858.140Gallus_gallus
ENSAOCG00000008056trnau1apa7987.347ENSGAFG00000004928trnau1apa9788.627Gambusia_affinis
ENSAOCG00000008056trnau1apa10090.228ENSGACG00000001443trnau1apa10090.228Gasterosteus_aculeatus
ENSAOCG00000008056trnau1apa9458.362ENSGAGG00000004940TRNAU1AP9957.770Gopherus_agassizii
ENSAOCG00000008056trnau1apa9858.416ENSGGOG00000003511TRNAU1AP9858.416Gorilla_gorilla
ENSAOCG00000008056trnau1apa10088.141ENSHBUG00000002510trnau1apa10088.141Haplochromis_burtoni
ENSAOCG00000008056trnau1apa9858.416ENSHGLG00000010380TRNAU1AP9858.416Heterocephalus_glaber_female
ENSAOCG00000008056trnau1apa9856.436ENSHGLG00100012699TRNAU1AP9856.436Heterocephalus_glaber_male
ENSAOCG00000008056trnau1apa9973.633ENSHCOG00000014770trnau1apa9971.704Hippocampus_comes
ENSAOCG00000008056trnau1apa9858.416ENSSTOG00000000079TRNAU1AP9858.416Ictidomys_tridecemlineatus
ENSAOCG00000008056trnau1apa9858.416ENSJJAG00000010128Trnau1ap9858.086Jaculus_jaculus
ENSAOCG00000008056trnau1apa10085.714ENSKMAG00000001230trnau1apa10087.987Kryptolebias_marmoratus
ENSAOCG00000008056trnau1apa10082.019ENSLBEG00000011683trnau1apa10082.704Labrus_bergylta
ENSAOCG00000008056trnau1apa9952.288ENSLACG00000005541TRNAU1AP9951.148Latimeria_chalumnae
ENSAOCG00000008056trnau1apa9461.644ENSLOCG00000004041trnau1apa9760.616Lepisosteus_oculatus
ENSAOCG00000008056trnau1apa9858.746ENSLAFG00000007628TRNAU1AP9858.746Loxodonta_africana
ENSAOCG00000008056trnau1apa9858.416ENSMFAG00000043751TRNAU1AP9858.416Macaca_fascicularis
ENSAOCG00000008056trnau1apa9858.416ENSMMUG00000006561TRNAU1AP9858.416Macaca_mulatta
ENSAOCG00000008056trnau1apa9858.416ENSMNEG00000044201TRNAU1AP9858.416Macaca_nemestrina
ENSAOCG00000008056trnau1apa9858.416ENSMLEG00000015649TRNAU1AP9858.416Mandrillus_leucophaeus
ENSAOCG00000008056trnau1apa9988.462ENSMAMG00000001247trnau1apa10088.462Mastacembelus_armatus
ENSAOCG00000008056trnau1apa10089.902ENSMZEG00005017722trnau1apa10089.902Maylandia_zebra
ENSAOCG00000008056trnau1apa9658.844ENSMGAG00000002105TRNAU1AP9958.844Meleagris_gallopavo
ENSAOCG00000008056trnau1apa9858.416ENSMICG00000008386TRNAU1AP9858.416Microcebus_murinus
ENSAOCG00000008056trnau1apa9858.416ENSMOCG00000011189Trnau1ap9858.416Microtus_ochrogaster
ENSAOCG00000008056trnau1apa10073.633ENSMMOG00000012107trnau1apa9975.241Mola_mola
ENSAOCG00000008056trnau1apa9857.843ENSMODG00000010927TRNAU1AP9857.756Monodelphis_domestica
ENSAOCG00000008056trnau1apa10088.103ENSMALG00000016778trnau1apa10088.103Monopterus_albus
ENSAOCG00000008056trnau1apa9858.416MGP_CAROLIEiJ_G0026563Trnau1ap9264.557Mus_caroli
ENSAOCG00000008056trnau1apa9858.416ENSMUSG00000028898Trnau1ap9264.557Mus_musculus
ENSAOCG00000008056trnau1apa9858.416MGP_PahariEiJ_G0028896Trnau1ap8476.271Mus_pahari
ENSAOCG00000008056trnau1apa9858.416MGP_SPRETEiJ_G0027544Trnau1ap9264.557Mus_spretus
ENSAOCG00000008056trnau1apa9958.170ENSMPUG00000015511TRNAU1AP9958.170Mustela_putorius_furo
ENSAOCG00000008056trnau1apa9858.416ENSMLUG00000012586TRNAU1AP9858.416Myotis_lucifugus
ENSAOCG00000008056trnau1apa9858.416ENSNGAG00000015881Trnau1ap9858.416Nannospalax_galili
ENSAOCG00000008056trnau1apa10076.774ENSNBRG00000001758trnau1apa9976.774Neolamprologus_brichardi
ENSAOCG00000008056trnau1apa9858.416ENSNLEG00000009822TRNAU1AP9858.416Nomascus_leucogenys
ENSAOCG00000008056trnau1apa9657.432ENSMEUG00000006117TRNAU1AP9957.432Notamacropus_eugenii
ENSAOCG00000008056trnau1apa5763.218ENSOPRG00000007084-5863.218Ochotona_princeps
ENSAOCG00000008056trnau1apa9858.416ENSODEG00000002970TRNAU1AP9858.416Octodon_degus
ENSAOCG00000008056trnau1apa8092.683ENSONIG00000004715trnau1apa9792.683Oreochromis_niloticus
ENSAOCG00000008056trnau1apa9346.897ENSOANG00000005325-9546.690Ornithorhynchus_anatinus
ENSAOCG00000008056trnau1apa9857.096ENSOCUG00000011704-9857.096Oryctolagus_cuniculus
ENSAOCG00000008056trnau1apa8549.042ENSOCUG00000006834-9747.510Oryctolagus_cuniculus
ENSAOCG00000008056trnau1apa9849.834ENSOCUG00000002353-9849.502Oryctolagus_cuniculus
ENSAOCG00000008056trnau1apa10081.759ENSORLG00000010428trnau1apa10081.759Oryzias_latipes
ENSAOCG00000008056trnau1apa10081.759ENSORLG00020000926trnau1ap10081.759Oryzias_latipes_hni
ENSAOCG00000008056trnau1apa10081.759ENSORLG00015009858trnau1ap10081.759Oryzias_latipes_hsok
ENSAOCG00000008056trnau1apa10081.433ENSOMEG00000007873trnau1apa10081.433Oryzias_melastigma
ENSAOCG00000008056trnau1apa9858.416ENSOGAG00000002274TRNAU1AP9858.416Otolemur_garnettii
ENSAOCG00000008056trnau1apa9957.843ENSOARG00000002843TRNAU1AP9957.843Ovis_aries
ENSAOCG00000008056trnau1apa9858.416ENSPPAG00000033927TRNAU1AP9858.416Pan_paniscus
ENSAOCG00000008056trnau1apa9858.416ENSPPRG00000004416TRNAU1AP9858.416Panthera_pardus
ENSAOCG00000008056trnau1apa9858.416ENSPTIG00000016677TRNAU1AP9858.416Panthera_tigris_altaica
ENSAOCG00000008056trnau1apa8851.852ENSPTRG00000000434-9352.747Pan_troglodytes
ENSAOCG00000008056trnau1apa9858.416ENSPANG00000016019TRNAU1AP9858.416Papio_anubis
ENSAOCG00000008056trnau1apa9361.856ENSPKIG00000015511trnau1apa9360.690Paramormyrops_kingsleyae
ENSAOCG00000008056trnau1apa9280.682ENSPKIG00000022205-9480.682Paramormyrops_kingsleyae
ENSAOCG00000008056trnau1apa9458.703ENSPSIG00000006864TRNAU1AP9958.276Pelodiscus_sinensis
ENSAOCG00000008056trnau1apa9969.836ENSPMGG00000023893trnau1apa9868.197Periophthalmus_magnuspinnatus
ENSAOCG00000008056trnau1apa9858.086ENSPEMG00000007877Trnau1ap9858.086Peromyscus_maniculatus_bairdii
ENSAOCG00000008056trnau1apa5553.179ENSPMAG00000000592trnau1apa9553.179Petromyzon_marinus
ENSAOCG00000008056trnau1apa7451.982ENSPMAG00000005934trnau1apa9650.661Petromyzon_marinus
ENSAOCG00000008056trnau1apa9982.353ENSPFOG00000008100trnau1apa9984.314Poecilia_formosa
ENSAOCG00000008056trnau1apa9581.973ENSPLAG00000010236trnau1apa9984.014Poecilia_latipinna
ENSAOCG00000008056trnau1apa9980.328ENSPMEG00000016387trnau1apa9782.295Poecilia_mexicana
ENSAOCG00000008056trnau1apa8982.105ENSPREG00000019821trnau1apa9584.444Poecilia_reticulata
ENSAOCG00000008056trnau1apa8650.746ENSPPYG00000001639-9850.746Pongo_abelii
ENSAOCG00000008056trnau1apa9858.416ENSPCOG00000027712-9858.416Propithecus_coquereli
ENSAOCG00000008056trnau1apa9748.161ENSPCOG00000023470-9948.161Propithecus_coquereli
ENSAOCG00000008056trnau1apa9858.416ENSPVAG00000017214TRNAU1AP9858.416Pteropus_vampyrus
ENSAOCG00000008056trnau1apa10088.462ENSPNYG00000010130trnau1apa9990.347Pundamilia_nyererei
ENSAOCG00000008056trnau1apa9953.268ENSPNAG00000024905trnau1apa9753.268Pygocentrus_nattereri
ENSAOCG00000008056trnau1apa9254.577ENSRNOG00000055344Trnau1ap9254.577Rattus_norvegicus
ENSAOCG00000008056trnau1apa9858.416ENSRBIG00000029083TRNAU1AP9858.416Rhinopithecus_bieti
ENSAOCG00000008056trnau1apa9858.416ENSRROG00000029128TRNAU1AP9858.416Rhinopithecus_roxellana
ENSAOCG00000008056trnau1apa9858.416ENSSBOG00000021299TRNAU1AP9858.416Saimiri_boliviensis_boliviensis
ENSAOCG00000008056trnau1apa9857.843ENSSHAG00000008108TRNAU1AP9857.756Sarcophilus_harrisii
ENSAOCG00000008056trnau1apa10083.601ENSSMAG00000020851trnau1apa10085.852Scophthalmus_maximus
ENSAOCG00000008056trnau1apa10088.462ENSSDUG00000011734trnau1apa10088.462Seriola_dumerili
ENSAOCG00000008056trnau1apa10072.964ENSSLDG00000012101trnau1apa9972.964Seriola_lalandi_dorsalis
ENSAOCG00000008056trnau1apa9658.446ENSSARG00000007536TRNAU1AP9958.446Sorex_araneus
ENSAOCG00000008056trnau1apa6352.332ENSSPUG00000010415-9950.259Sphenodon_punctatus
ENSAOCG00000008056trnau1apa9856.478ENSSPUG00000010400-9956.146Sphenodon_punctatus
ENSAOCG00000008056trnau1apa10093.811ENSSPAG00000005029trnau1apa10093.811Stegastes_partitus
ENSAOCG00000008056trnau1apa9858.416ENSSSCG00000030284TRNAU1AP9858.416Sus_scrofa
ENSAOCG00000008056trnau1apa9659.259ENSTGUG00000000735-9958.844Taeniopygia_guttata
ENSAOCG00000008056trnau1apa6942.661ENSTGUG00000005908-9943.119Taeniopygia_guttata
ENSAOCG00000008056trnau1apa10083.388ENSTRUG00000003352trnau1apa10082.736Takifugu_rubripes
ENSAOCG00000008056trnau1apa10077.670ENSTNIG00000006129trnau1apa10077.670Tetraodon_nigroviridis
ENSAOCG00000008056trnau1apa8451.331ENSTBEG00000008049-9852.308Tupaia_belangeri
ENSAOCG00000008056trnau1apa9858.416ENSTTRG00000001854TRNAU1AP9858.416Tursiops_truncatus
ENSAOCG00000008056trnau1apa9458.219ENSUAMG00000008789TRNAU1AP9958.219Ursus_americanus
ENSAOCG00000008056trnau1apa9858.416ENSUMAG00000011068TRNAU1AP9858.086Ursus_maritimus
ENSAOCG00000008056trnau1apa9851.111ENSVPAG00000006778TRNAU1AP9951.111Vicugna_pacos
ENSAOCG00000008056trnau1apa9757.807ENSVVUG00000012518TRNAU1AP9157.807Vulpes_vulpes
ENSAOCG00000008056trnau1apa9983.333ENSXMAG00000017361trnau1apa9985.294Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us