EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000008523 (Gene tree)
Gene ID: 111586363
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 25321 bases
Position: chrNXFZ01004849.1:21425-46745
Accession: 111586363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000005074	ResIII	PF04851.15	5.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000006956	-	4404	XM_023296054	ENSAOCP00000005074	924 (aa)	XP_023151822	-

Gene Model

Click here to download ENSAOCG00000008523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000008523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000008523	rad54b	53	31.597	ENSAOCG00000006348	hells	64	31.597
ENSAOCG00000008523	rad54b	67	45.039	ENSAOCG00000017576	rad54l	78	46.271

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000008523	rad54b	99	54.594	ENSG00000197275	RAD54B	99	54.594	Homo_sapiens
ENSAOCG00000008523	rad54b	79	59.128	ENSG00000265817	FSBP	99	59.128	Homo_sapiens
ENSAOCG00000008523	rad54b	99	55.579	ENSAMEG00000005834	-	99	55.579	Ailuropoda_melanoleuca
ENSAOCG00000008523	rad54b	100	81.189	ENSACIG00000013005	rad54b	100	81.189	Amphilophus_citrinellus
ENSAOCG00000008523	rad54b	100	86.378	ENSAPEG00000001673	rad54b	100	86.378	Amphiprion_percula
ENSAOCG00000008523	rad54b	100	84.171	ENSATEG00000001527	rad54b	100	83.957	Anabas_testudineus
ENSAOCG00000008523	rad54b	99	56.825	ENSAPLG00000014366	-	99	56.720	Anas_platyrhynchos
ENSAOCG00000008523	rad54b	85	60.177	ENSACAG00000003671	-	98	60.177	Anolis_carolinensis
ENSAOCG00000008523	rad54b	70	60.676	ENSANAG00000019528	-	99	60.676	Aotus_nancymaae
ENSAOCG00000008523	rad54b	100	80.541	ENSACLG00000007826	rad54b	100	80.541	Astatotilapia_calliptera
ENSAOCG00000008523	rad54b	85	67.344	ENSAMXG00000039985	rad54b	94	66.877	Astyanax_mexicanus
ENSAOCG00000008523	rad54b	99	55.460	ENSBTAG00000000632	RAD54B	99	55.460	Bos_taurus
ENSAOCG00000008523	rad54b	59	40.472	WBGene00013792	Y116A8C.13	83	36.242	Caenorhabditis_elegans
ENSAOCG00000008523	rad54b	99	54.915	ENSCJAG00000000080	-	99	59.264	Callithrix_jacchus
ENSAOCG00000008523	rad54b	99	55.191	ENSCAFG00000009179	RAD54B	99	55.191	Canis_familiaris
ENSAOCG00000008523	rad54b	99	55.403	ENSCAFG00020012084	-	99	55.403	Canis_lupus_dingo
ENSAOCG00000008523	rad54b	99	54.487	ENSCHIG00000008230	-	99	54.839	Capra_hircus
ENSAOCG00000008523	rad54b	99	55.154	ENSTSYG00000013234	-	99	55.154	Carlito_syrichta
ENSAOCG00000008523	rad54b	99	55.187	ENSCPOG00000011643	-	99	55.187	Cavia_porcellus
ENSAOCG00000008523	rad54b	99	55.048	ENSCCAG00000011754	-	99	59.264	Cebus_capucinus
ENSAOCG00000008523	rad54b	99	54.565	ENSCATG00000030661	-	99	59.072	Cercocebus_atys
ENSAOCG00000008523	rad54b	99	54.478	ENSCLAG00000010476	-	99	54.478	Chinchilla_lanigera
ENSAOCG00000008523	rad54b	99	54.420	ENSCSAG00000012712	-	99	54.420	Chlorocebus_sabaeus
ENSAOCG00000008523	rad54b	99	57.663	ENSCPBG00000003204	-	98	59.507	Chrysemys_picta_bellii
ENSAOCG00000008523	rad54b	99	54.759	ENSCANG00000017939	-	99	59.209	Colobus_angolensis_palliatus
ENSAOCG00000008523	rad54b	99	54.310	ENSCGRG00001020184	Rad54b	99	54.310	Cricetulus_griseus_chok1gshd
ENSAOCG00000008523	rad54b	99	53.055	ENSCGRG00000016752	Rad54b	99	53.055	Cricetulus_griseus_crigri
ENSAOCG00000008523	rad54b	99	75.216	ENSCSEG00000001601	rad54b	99	75.108	Cynoglossus_semilaevis
ENSAOCG00000008523	rad54b	100	78.710	ENSCVAG00000009200	rad54b	100	78.710	Cyprinodon_variegatus
ENSAOCG00000008523	rad54b	99	62.860	ENSDARG00000092134	rad54b	99	68.069	Danio_rerio
ENSAOCG00000008523	rad54b	99	55.172	ENSDNOG00000015535	-	99	55.485	Dasypus_novemcinctus
ENSAOCG00000008523	rad54b	99	55.258	ENSDORG00000002492	Rad54b	99	55.213	Dipodomys_ordii
ENSAOCG00000008523	rad54b	87	58.180	ENSETEG00000010605	-	100	58.180	Echinops_telfairi
ENSAOCG00000008523	rad54b	99	46.779	ENSEBUG00000009104	rad54b	98	46.406	Eptatretus_burgeri
ENSAOCG00000008523	rad54b	85	59.395	ENSEASG00005004021	-	88	59.395	Equus_asinus_asinus
ENSAOCG00000008523	rad54b	99	54.984	ENSECAG00000021949	-	98	54.984	Equus_caballus
ENSAOCG00000008523	rad54b	70	52.866	ENSEEUG00000008056	-	72	50.920	Erinaceus_europaeus
ENSAOCG00000008523	rad54b	100	72.785	ENSELUG00000009287	rad54b	100	72.996	Esox_lucius
ENSAOCG00000008523	rad54b	99	54.749	ENSFCAG00000015513	-	99	59.946	Felis_catus
ENSAOCG00000008523	rad54b	99	56.821	ENSFALG00000005467	-	99	56.821	Ficedula_albicollis
ENSAOCG00000008523	rad54b	99	54.931	ENSFDAG00000020541	-	100	54.931	Fukomys_damarensis
ENSAOCG00000008523	rad54b	87	81.327	ENSFHEG00000014382	rad54b	89	81.572	Fundulus_heteroclitus
ENSAOCG00000008523	rad54b	85	82.219	ENSGMOG00000014774	rad54b	99	82.093	Gadus_morhua
ENSAOCG00000008523	rad54b	99	56.476	ENSGALG00000043597	RAD54B	99	56.476	Gallus_gallus
ENSAOCG00000008523	rad54b	99	82.585	ENSGAFG00000007901	rad54b	98	85.714	Gambusia_affinis
ENSAOCG00000008523	rad54b	99	78.879	ENSGACG00000009128	rad54b	99	78.879	Gasterosteus_aculeatus
ENSAOCG00000008523	rad54b	99	57.783	ENSGAGG00000018747	-	99	57.783	Gopherus_agassizii
ENSAOCG00000008523	rad54b	99	54.894	ENSGGOG00000023516	-	99	54.894	Gorilla_gorilla
ENSAOCG00000008523	rad54b	100	85.638	ENSHBUG00000016017	rad54b	99	85.531	Haplochromis_burtoni
ENSAOCG00000008523	rad54b	99	54.316	ENSHGLG00000008263	RAD54B	99	54.316	Heterocephalus_glaber_female
ENSAOCG00000008523	rad54b	99	53.556	ENSHGLG00100008108	-	99	53.556	Heterocephalus_glaber_male
ENSAOCG00000008523	rad54b	99	73.838	ENSHCOG00000004764	rad54b	98	77.503	Hippocampus_comes
ENSAOCG00000008523	rad54b	99	61.826	ENSIPUG00000018531	rad54b	99	61.722	Ictalurus_punctatus
ENSAOCG00000008523	rad54b	99	54.095	ENSSTOG00000010791	-	99	54.095	Ictidomys_tridecemlineatus
ENSAOCG00000008523	rad54b	99	53.904	ENSJJAG00000010314	Rad54b	99	53.805	Jaculus_jaculus
ENSAOCG00000008523	rad54b	89	83.100	ENSKMAG00000004744	rad54b	97	79.832	Kryptolebias_marmoratus
ENSAOCG00000008523	rad54b	81	63.564	ENSLACG00000000859	-	100	63.431	Latimeria_chalumnae
ENSAOCG00000008523	rad54b	99	62.619	ENSLOCG00000010100	rad54b	99	63.186	Lepisosteus_oculatus
ENSAOCG00000008523	rad54b	85	58.417	ENSLAFG00000015315	-	97	58.417	Loxodonta_africana
ENSAOCG00000008523	rad54b	99	54.352	ENSMFAG00000031629	-	99	59.209	Macaca_fascicularis
ENSAOCG00000008523	rad54b	99	54.352	ENSMMUG00000005659	-	99	54.352	Macaca_mulatta
ENSAOCG00000008523	rad54b	99	54.478	ENSMNEG00000016408	-	99	54.478	Macaca_nemestrina
ENSAOCG00000008523	rad54b	99	54.246	ENSMLEG00000006946	-	99	54.246	Mandrillus_leucophaeus
ENSAOCG00000008523	rad54b	100	76.589	ENSMAMG00000012269	rad54b	99	76.483	Mastacembelus_armatus
ENSAOCG00000008523	rad54b	100	85.638	ENSMZEG00005005281	rad54b	100	85.531	Maylandia_zebra
ENSAOCG00000008523	rad54b	99	56.728	ENSMGAG00000012024	-	99	56.728	Meleagris_gallopavo
ENSAOCG00000008523	rad54b	99	53.863	ENSMAUG00000013586	Rad54b	99	53.863	Mesocricetus_auratus
ENSAOCG00000008523	rad54b	85	59.296	ENSMICG00000000754	-	90	59.296	Microcebus_murinus
ENSAOCG00000008523	rad54b	99	53.706	ENSMOCG00000020035	Rad54b	99	53.526	Microtus_ochrogaster
ENSAOCG00000008523	rad54b	99	76.874	ENSMMOG00000003394	rad54b	99	76.874	Mola_mola
ENSAOCG00000008523	rad54b	85	59.673	ENSMODG00000007343	-	97	59.548	Monodelphis_domestica
ENSAOCG00000008523	rad54b	70	86.180	ENSMALG00000001520	rad54b	100	86.180	Monopterus_albus
ENSAOCG00000008523	rad54b	99	54.399	MGP_CAROLIEiJ_G0025810	Rad54b	99	54.234	Mus_caroli
ENSAOCG00000008523	rad54b	99	53.698	ENSMUSG00000078773	Rad54b	99	53.698	Mus_musculus
ENSAOCG00000008523	rad54b	99	54.790	MGP_PahariEiJ_G0023933	Rad54b	99	54.790	Mus_pahari
ENSAOCG00000008523	rad54b	99	54.341	MGP_SPRETEiJ_G0026758	Rad54b	99	54.341	Mus_spretus
ENSAOCG00000008523	rad54b	85	60.176	ENSMPUG00000008878	-	97	60.176	Mustela_putorius_furo
ENSAOCG00000008523	rad54b	99	55.294	ENSMLUG00000008953	-	99	55.294	Myotis_lucifugus
ENSAOCG00000008523	rad54b	99	54.448	ENSNGAG00000017537	Rad54b	99	54.448	Nannospalax_galili
ENSAOCG00000008523	rad54b	100	80.541	ENSNBRG00000013394	rad54b	100	80.541	Neolamprologus_brichardi
ENSAOCG00000008523	rad54b	99	54.749	ENSNLEG00000003062	-	99	59.128	Nomascus_leucogenys
ENSAOCG00000008523	rad54b	69	62.148	ENSMEUG00000012426	-	69	62.148	Notamacropus_eugenii
ENSAOCG00000008523	rad54b	80	75.000	ENSODEG00000002650	-	93	73.913	Octodon_degus
ENSAOCG00000008523	rad54b	99	55.437	ENSODEG00000019564	-	99	55.330	Octodon_degus
ENSAOCG00000008523	rad54b	100	86.388	ENSONIG00000006067	rad54b	100	86.281	Oreochromis_niloticus
ENSAOCG00000008523	rad54b	82	59.766	ENSOANG00000011348	-	99	59.790	Ornithorhynchus_anatinus
ENSAOCG00000008523	rad54b	99	55.638	ENSOCUG00000016478	-	99	55.638	Oryctolagus_cuniculus
ENSAOCG00000008523	rad54b	100	79.193	ENSORLG00000008918	rad54b	100	85.294	Oryzias_latipes
ENSAOCG00000008523	rad54b	70	85.139	ENSORLG00020012171	rad54b	100	85.139	Oryzias_latipes_hni
ENSAOCG00000008523	rad54b	100	78.897	ENSORLG00015018536	rad54b	100	78.791	Oryzias_latipes_hsok
ENSAOCG00000008523	rad54b	84	84.367	ENSOMEG00000004345	rad54b	100	84.367	Oryzias_melastigma
ENSAOCG00000008523	rad54b	99	53.921	ENSOGAG00000007854	-	99	53.921	Otolemur_garnettii
ENSAOCG00000008523	rad54b	85	60.200	ENSOARG00000007691	-	97	60.200	Ovis_aries
ENSAOCG00000008523	rad54b	99	53.575	ENSPPAG00000029572	-	99	53.575	Pan_paniscus
ENSAOCG00000008523	rad54b	99	54.749	ENSPPRG00000007571	-	99	59.946	Panthera_pardus
ENSAOCG00000008523	rad54b	79	59.809	ENSPTIG00000012670	-	99	59.809	Panthera_tigris_altaica
ENSAOCG00000008523	rad54b	99	54.749	ENSPTRG00000020427	-	99	58.992	Pan_troglodytes
ENSAOCG00000008523	rad54b	99	54.352	ENSPANG00000019566	-	99	54.352	Papio_anubis
ENSAOCG00000008523	rad54b	99	63.607	ENSPKIG00000014974	rad54b	99	63.501	Paramormyrops_kingsleyae
ENSAOCG00000008523	rad54b	99	56.217	ENSPSIG00000002383	-	96	61.577	Pelodiscus_sinensis
ENSAOCG00000008523	rad54b	99	54.234	ENSPEMG00000012133	Rad54b	99	54.185	Peromyscus_maniculatus_bairdii
ENSAOCG00000008523	rad54b	85	58.616	ENSPMAG00000002916	rad54b	98	58.742	Petromyzon_marinus
ENSAOCG00000008523	rad54b	85	59.222	ENSPCIG00000020151	-	92	58.846	Phascolarctos_cinereus
ENSAOCG00000008523	rad54b	99	82.265	ENSPFOG00000023411	rad54b	99	82.265	Poecilia_formosa
ENSAOCG00000008523	rad54b	99	81.944	ENSPLAG00000010430	rad54b	99	81.944	Poecilia_latipinna
ENSAOCG00000008523	rad54b	99	82.372	ENSPMEG00000016873	rad54b	99	86.000	Poecilia_mexicana
ENSAOCG00000008523	rad54b	99	82.516	ENSPREG00000018443	rad54b	99	82.516	Poecilia_reticulata
ENSAOCG00000008523	rad54b	99	54.749	ENSPPYG00000018750	-	99	54.749	Pongo_abelii
ENSAOCG00000008523	rad54b	99	55.128	ENSPCOG00000026845	-	99	58.752	Propithecus_coquereli
ENSAOCG00000008523	rad54b	80	58.926	ENSPVAG00000000261	-	85	58.926	Pteropus_vampyrus
ENSAOCG00000008523	rad54b	86	86.108	ENSPNYG00000018303	rad54b	97	86.108	Pundamilia_nyererei
ENSAOCG00000008523	rad54b	99	63.130	ENSPNAG00000000295	rad54b	99	63.023	Pygocentrus_nattereri
ENSAOCG00000008523	rad54b	99	54.478	ENSRNOG00000039949	Rad54b	99	54.478	Rattus_norvegicus
ENSAOCG00000008523	rad54b	99	54.691	ENSRBIG00000020419	-	99	54.691	Rhinopithecus_bieti
ENSAOCG00000008523	rad54b	99	54.691	ENSRROG00000039897	-	99	54.691	Rhinopithecus_roxellana
ENSAOCG00000008523	rad54b	80	36.473	YBR073W	RDH54	80	37.125	Saccharomyces_cerevisiae
ENSAOCG00000008523	rad54b	99	55.283	ENSSBOG00000028501	-	99	55.283	Saimiri_boliviensis_boliviensis
ENSAOCG00000008523	rad54b	99	55.485	ENSSHAG00000017038	-	99	55.485	Sarcophilus_harrisii
ENSAOCG00000008523	rad54b	61	71.303	ENSSFOG00015008483	rad54b	89	71.303	Scleropages_formosus
ENSAOCG00000008523	rad54b	99	82.821	ENSSMAG00000018659	rad54b	99	83.245	Scophthalmus_maximus
ENSAOCG00000008523	rad54b	97	85.355	ENSSDUG00000001122	rad54b	96	85.355	Seriola_dumerili
ENSAOCG00000008523	rad54b	100	85.608	ENSSLDG00000013787	rad54b	100	85.608	Seriola_lalandi_dorsalis
ENSAOCG00000008523	rad54b	99	57.449	ENSSPUG00000016497	-	99	57.342	Sphenodon_punctatus
ENSAOCG00000008523	rad54b	100	85.776	ENSSPAG00000012800	rad54b	100	85.776	Stegastes_partitus
ENSAOCG00000008523	rad54b	99	54.555	ENSSSCG00000006101	-	98	59.171	Sus_scrofa
ENSAOCG00000008523	rad54b	99	56.416	ENSTGUG00000011880	-	99	56.416	Taeniopygia_guttata
ENSAOCG00000008523	rad54b	100	77.273	ENSTRUG00000010015	rad54b	99	77.378	Takifugu_rubripes
ENSAOCG00000008523	rad54b	99	51.450	ENSTTRG00000006312	-	99	51.450	Tursiops_truncatus
ENSAOCG00000008523	rad54b	99	55.579	ENSUMAG00000016401	-	99	55.579	Ursus_maritimus
ENSAOCG00000008523	rad54b	99	53.632	ENSVPAG00000003157	-	99	53.632	Vicugna_pacos
ENSAOCG00000008523	rad54b	99	48.093	ENSXETG00000025924	rad54b	98	53.226	Xenopus_tropicalis
ENSAOCG00000008523	rad54b	99	76.616	ENSXMAG00000013141	rad54b	99	76.616	Xiphophorus_maculatus