EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000008973 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 5298 bases
Position: chrNXFZ01001919.1:622642-627939
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000005460	RVT_1	PF00078.27	4.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000006291	-	4338	-	ENSAOCP00000005460	1445 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000008973's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000008973's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000008973	-	82	35.513	ENSAOCG00000021572	-	96	35.513
ENSAOCG00000008973	-	74	36.789	ENSAOCG00000019370	-	99	36.789
ENSAOCG00000008973	-	57	37.815	ENSAOCG00000013559	-	99	37.815
ENSAOCG00000008973	-	82	35.513	ENSAOCG00000017326	-	91	35.513
ENSAOCG00000008973	-	55	38.896	ENSAOCG00000022482	-	99	38.896
ENSAOCG00000008973	-	65	34.619	ENSAOCG00000017045	-	82	34.619
ENSAOCG00000008973	-	75	34.941	ENSAOCG00000011998	-	99	34.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000008973	-	82	35.934	ENSAPEG00000012642	-	95	35.934	Amphiprion_percula
ENSAOCG00000008973	-	57	32.773	ENSACLG00000027045	-	99	32.773	Astatotilapia_calliptera
ENSAOCG00000008973	-	82	31.631	ENSACLG00000012298	-	95	31.631	Astatotilapia_calliptera
ENSAOCG00000008973	-	80	30.598	ENSACLG00000023850	-	92	30.598	Astatotilapia_calliptera
ENSAOCG00000008973	-	67	34.426	ENSACLG00000026023	-	90	34.426	Astatotilapia_calliptera
ENSAOCG00000008973	-	82	36.463	ENSACLG00000014673	-	93	36.882	Astatotilapia_calliptera
ENSAOCG00000008973	-	74	35.168	ENSACLG00000018177	-	94	35.168	Astatotilapia_calliptera
ENSAOCG00000008973	-	82	35.050	ENSACLG00000002748	-	99	35.050	Astatotilapia_calliptera
ENSAOCG00000008973	-	57	32.485	ENSAMXG00000033587	-	99	32.485	Astyanax_mexicanus
ENSAOCG00000008973	-	82	31.120	ENSAMXG00000031230	-	94	31.120	Astyanax_mexicanus
ENSAOCG00000008973	-	68	32.435	ENSAMXG00000037218	-	98	32.435	Astyanax_mexicanus
ENSAOCG00000008973	-	56	38.246	ENSAMXG00000036752	-	99	38.246	Astyanax_mexicanus
ENSAOCG00000008973	-	82	35.554	ENSAMXG00000042761	-	94	35.554	Astyanax_mexicanus
ENSAOCG00000008973	-	83	30.966	ENSAMXG00000034221	-	95	30.966	Astyanax_mexicanus
ENSAOCG00000008973	-	82	31.596	ENSKMAG00000014428	-	94	31.596	Kryptolebias_marmoratus
ENSAOCG00000008973	-	81	31.883	ENSKMAG00000020345	-	94	31.883	Kryptolebias_marmoratus
ENSAOCG00000008973	-	82	37.867	ENSKMAG00000007098	-	93	37.867	Kryptolebias_marmoratus
ENSAOCG00000008973	-	80	36.552	ENSKMAG00000002601	-	93	36.552	Kryptolebias_marmoratus
ENSAOCG00000008973	-	80	33.447	ENSKMAG00000006598	-	99	33.618	Kryptolebias_marmoratus
ENSAOCG00000008973	-	86	31.390	ENSKMAG00000018279	-	99	31.390	Kryptolebias_marmoratus
ENSAOCG00000008973	-	82	36.326	ENSKMAG00000013004	-	93	36.326	Kryptolebias_marmoratus
ENSAOCG00000008973	-	68	35.968	ENSKMAG00000006893	-	99	35.968	Kryptolebias_marmoratus
ENSAOCG00000008973	-	54	53.435	ENSLBEG00000017877	-	99	53.435	Labrus_bergylta
ENSAOCG00000008973	-	51	40.637	ENSMZEG00005013632	-	99	40.637	Maylandia_zebra
ENSAOCG00000008973	-	65	31.074	ENSMZEG00005001544	-	94	31.074	Maylandia_zebra
ENSAOCG00000008973	-	62	33.152	ENSONIG00000020778	-	99	33.152	Oreochromis_niloticus
ENSAOCG00000008973	-	82	34.243	ENSORLG00000029798	-	94	34.243	Oryzias_latipes
ENSAOCG00000008973	-	55	50.993	ENSORLG00000023193	-	95	50.993	Oryzias_latipes
ENSAOCG00000008973	-	82	34.491	ENSORLG00000025420	-	94	34.491	Oryzias_latipes
ENSAOCG00000008973	-	85	30.739	ENSORLG00000029419	-	98	30.739	Oryzias_latipes
ENSAOCG00000008973	-	82	34.491	ENSORLG00000026691	-	94	34.491	Oryzias_latipes
ENSAOCG00000008973	-	82	35.780	ENSORLG00020001169	-	93	35.780	Oryzias_latipes_hni
ENSAOCG00000008973	-	82	30.215	ENSORLG00020000561	-	94	30.215	Oryzias_latipes_hni
ENSAOCG00000008973	-	82	34.491	ENSORLG00020020951	-	94	34.491	Oryzias_latipes_hni
ENSAOCG00000008973	-	82	35.846	ENSORLG00020008142	-	93	35.846	Oryzias_latipes_hni
ENSAOCG00000008973	-	61	31.292	ENSORLG00020016539	-	99	31.292	Oryzias_latipes_hni
ENSAOCG00000008973	-	51	33.732	ENSORLG00020003581	-	92	33.644	Oryzias_latipes_hni
ENSAOCG00000008973	-	82	30.132	ENSORLG00015013713	-	94	30.132	Oryzias_latipes_hsok
ENSAOCG00000008973	-	83	35.927	ENSORLG00015002129	-	93	35.927	Oryzias_latipes_hsok
ENSAOCG00000008973	-	80	31.489	ENSORLG00015002592	-	91	31.198	Oryzias_latipes_hsok
ENSAOCG00000008973	-	70	35.323	ENSOMEG00000021560	-	99	35.323	Oryzias_melastigma
ENSAOCG00000008973	-	54	32.125	ENSOMEG00000006131	-	99	32.125	Oryzias_melastigma
ENSAOCG00000008973	-	61	36.343	ENSPFOG00000021895	-	91	36.343	Poecilia_formosa
ENSAOCG00000008973	-	80	31.606	ENSPREG00000005522	-	93	31.606	Poecilia_reticulata
ENSAOCG00000008973	-	83	34.832	ENSPREG00000018911	-	94	35.131	Poecilia_reticulata
ENSAOCG00000008973	-	63	40.781	ENSSLDG00000010601	-	87	40.781	Seriola_lalandi_dorsalis
ENSAOCG00000008973	-	69	36.893	ENSXETG00000034016	-	99	36.893	Xenopus_tropicalis
ENSAOCG00000008973	-	57	33.453	ENSXMAG00000021762	-	95	33.453	Xiphophorus_maculatus
ENSAOCG00000008973	-	59	33.022	ENSXMAG00000024492	-	99	33.022	Xiphophorus_maculatus
ENSAOCG00000008973	-	57	36.754	ENSXMAG00000023805	-	99	36.754	Xiphophorus_maculatus
ENSAOCG00000008973	-	82	35.993	ENSXMAG00000027070	-	93	35.993	Xiphophorus_maculatus
ENSAOCG00000008973	-	81	32.245	ENSXMAG00000028274	-	98	32.245	Xiphophorus_maculatus
ENSAOCG00000008973	-	77	36.898	ENSXMAG00000027558	-	89	37.044	Xiphophorus_maculatus