EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000009003 (Gene tree)
Gene ID
111588250
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Minus strand
Length
45559 bases
Position
chrNXFZ01005961.1:197669-243227
Accession
111588250
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000005492tRNA_anti-codonPF01336.252.9e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000006228RPA1 (1 of many)-2012925XM_023298513ENSAOCP00000005492649 (aa)XP_023154281UPI000C30CB25
Gene Model
Click here to download ENSAOCG00000009003's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000009003's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000009003RPA19959.317ENSAOCG00000023376rpa19469.683
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000009003RPA110088.133ENSAPOG00000019409RPA110087.896Acanthochromis_polyacanthus
ENSAOCG00000009003RPA19959.535ENSAPOG00000011658rpa19469.752Acanthochromis_polyacanthus
ENSAOCG00000009003RPA19755.397ENSAMEG00000007706RPA19654.574Ailuropoda_melanoleuca
ENSAOCG00000009003RPA19652.404ENSACIG00000007277rpa19952.320Amphilophus_citrinellus
ENSAOCG00000009003RPA19678.812ENSACIG00000012881RPA19978.491Amphilophus_citrinellus
ENSAOCG00000009003RPA110096.687ENSAPEG00000019132RPA110096.687Amphiprion_percula
ENSAOCG00000009003RPA19959.317ENSAPEG00000008634rpa19958.696Amphiprion_percula
ENSAOCG00000009003RPA110079.909ENSATEG00000006443RPA110079.148Anabas_testudineus
ENSAOCG00000009003RPA19558.738ENSATEG00000022024rpa19958.900Anabas_testudineus
ENSAOCG00000009003RPA19847.966ENSAPLG00000012442RPA110047.966Anas_platyrhynchos
ENSAOCG00000009003RPA18858.913ENSACAG00000014490RPA19951.534Anolis_carolinensis
ENSAOCG00000009003RPA19756.825ENSANAG00000023456RPA19856.349Aotus_nancymaae
ENSAOCG00000009003RPA19981.481ENSACLG00000005223RPA19981.481Astatotilapia_calliptera
ENSAOCG00000009003RPA19459.672ENSACLG00000006640rpa19960.164Astatotilapia_calliptera
ENSAOCG00000009003RPA110059.476ENSAMXG00000008418rpa19959.509Astyanax_mexicanus
ENSAOCG00000009003RPA19954.321ENSBTAG00000009711RPA19953.858Bos_taurus
ENSAOCG00000009003RPA110054.518ENSCJAG00000001848RPA19954.908Callithrix_jacchus
ENSAOCG00000009003RPA19954.405ENSCAFG00000019249RPA19954.000Canis_familiaris
ENSAOCG00000009003RPA19954.405ENSCAFG00020009847RPA19954.000Canis_lupus_dingo
ENSAOCG00000009003RPA19953.763ENSCHIG00000026308RPA19954.475Capra_hircus
ENSAOCG00000009003RPA19954.685ENSTSYG00000003482-9954.378Carlito_syrichta
ENSAOCG00000009003RPA19954.224ENSCPOG00000000035RPA19954.685Cavia_porcellus
ENSAOCG00000009003RPA110043.750ENSCCAG00000010981RPA19943.399Cebus_capucinus
ENSAOCG00000009003RPA19954.224ENSCLAG00000005185-9954.378Chinchilla_lanigera
ENSAOCG00000009003RPA19951.385ENSCLAG00000015045-9951.538Chinchilla_lanigera
ENSAOCG00000009003RPA110044.665ENSCSAG00000013833RPA19944.885Chlorocebus_sabaeus
ENSAOCG00000009003RPA19654.487ENSCHOG00000013540-9953.895Choloepus_hoffmanni
ENSAOCG00000009003RPA16763.991ENSCHOG00000009454-9963.991Choloepus_hoffmanni
ENSAOCG00000009003RPA19955.077ENSCPBG00000020377RPA19955.611Chrysemys_picta_bellii
ENSAOCG00000009003RPA19942.573ENSCING00000023482-9942.573Ciona_intestinalis
ENSAOCG00000009003RPA18663.348ENSCANG00000030911RPA19463.348Colobus_angolensis_palliatus
ENSAOCG00000009003RPA19954.884ENSCGRG00001008197Rpa19954.729Cricetulus_griseus_chok1gshd
ENSAOCG00000009003RPA16762.844ENSCGRG00000000582Rpa18562.844Cricetulus_griseus_crigri
ENSAOCG00000009003RPA19957.984ENSCSEG00000013066rpa19268.009Cynoglossus_semilaevis
ENSAOCG00000009003RPA110066.208ENSCSEG00000012726RPA19966.393Cynoglossus_semilaevis
ENSAOCG00000009003RPA19958.605ENSCVAG00000019431rpa19960.297Cyprinodon_variegatus
ENSAOCG00000009003RPA19674.462ENSCVAG00000013446-9674.462Cyprinodon_variegatus
ENSAOCG00000009003RPA110059.630ENSDARG00000003938rpa19959.938Danio_rerio
ENSAOCG00000009003RPA19755.873ENSDNOG00000017218RPA19654.660Dasypus_novemcinctus
ENSAOCG00000009003RPA19955.453ENSDORG00000006199Rpa19954.755Dipodomys_ordii
ENSAOCG00000009003RPA19934.877FBgn0010173RpA-709841.263Drosophila_melanogaster
ENSAOCG00000009003RPA18461.856ENSETEG00000017608RPA18261.856Echinops_telfairi
ENSAOCG00000009003RPA19754.690ENSEASG00005009372RPA19963.182Equus_asinus_asinus
ENSAOCG00000009003RPA19955.023ENSECAG00000023886RPA19953.917Equus_caballus
ENSAOCG00000009003RPA16464.200ENSEEUG00000002186-6864.200Erinaceus_europaeus
ENSAOCG00000009003RPA110059.385ENSELUG00000021071rpa19959.231Esox_lucius
ENSAOCG00000009003RPA16472.182ENSELUG00000006136RPA19472.182Esox_lucius
ENSAOCG00000009003RPA19955.401ENSFCAG00000006306RPA19953.963Felis_catus
ENSAOCG00000009003RPA19953.374ENSFALG00000006575RPA19952.744Ficedula_albicollis
ENSAOCG00000009003RPA19954.211ENSFDAG00000007720RPA19954.294Fukomys_damarensis
ENSAOCG00000009003RPA19959.351ENSFHEG00000003580rpa19959.077Fundulus_heteroclitus
ENSAOCG00000009003RPA19068.409ENSGMOG00000010382rpa19868.409Gadus_morhua
ENSAOCG00000009003RPA19954.154ENSGALG00000003072RPA19953.670Gallus_gallus
ENSAOCG00000009003RPA19958.951ENSGAFG00000012916rpa19169.932Gambusia_affinis
ENSAOCG00000009003RPA19976.621ENSGAFG00000020953RPA19976.621Gambusia_affinis
ENSAOCG00000009003RPA19957.519ENSGACG00000010856rpa19957.519Gasterosteus_aculeatus
ENSAOCG00000009003RPA19955.077ENSGAGG00000013611RPA19954.923Gopherus_agassizii
ENSAOCG00000009003RPA19163.492ENSGGOG00000014186RPA19663.492Gorilla_gorilla
ENSAOCG00000009003RPA19959.225ENSHBUG00000017773rpa19959.042Haplochromis_burtoni
ENSAOCG00000009003RPA19664.960ENSHBUG00000009348RPA19864.960Haplochromis_burtoni
ENSAOCG00000009003RPA19952.924ENSHGLG00000008846RPA110054.141Heterocephalus_glaber_female
ENSAOCG00000009003RPA19348.026ENSHGLG00100002005-9647.947Heterocephalus_glaber_male
ENSAOCG00000009003RPA19952.924ENSHGLG00100017755-10054.141Heterocephalus_glaber_male
ENSAOCG00000009003RPA19949.773ENSHGLG00100000799-9949.467Heterocephalus_glaber_male
ENSAOCG00000009003RPA19954.277ENSHCOG00000001401rpa19954.121Hippocampus_comes
ENSAOCG00000009003RPA19353.132ENSHCOG00000000351RPA19953.132Hippocampus_comes
ENSAOCG00000009003RPA110061.633ENSIPUG00000004400rpa19961.171Ictalurus_punctatus
ENSAOCG00000009003RPA19652.208ENSSTOG00000022475RPA19951.577Ictidomys_tridecemlineatus
ENSAOCG00000009003RPA19655.662ENSJJAG00000000876Rpa19854.101Jaculus_jaculus
ENSAOCG00000009003RPA19974.730ENSKMAG00000000234RPA19974.730Kryptolebias_marmoratus
ENSAOCG00000009003RPA19958.669ENSKMAG00000005605rpa19958.669Kryptolebias_marmoratus
ENSAOCG00000009003RPA19970.822ENSLBEG00000002281RPA19969.830Labrus_bergylta
ENSAOCG00000009003RPA19957.121ENSLBEG00000021604rpa19667.873Labrus_bergylta
ENSAOCG00000009003RPA17257.569ENSLACG00000007210RPA19557.569Latimeria_chalumnae
ENSAOCG00000009003RPA110059.077ENSLOCG00000006397rpa19958.372Lepisosteus_oculatus
ENSAOCG00000009003RPA19755.803ENSLAFG00000015354RPA19952.836Loxodonta_africana
ENSAOCG00000009003RPA18254.597ENSMFAG00000036138-9854.887Macaca_fascicularis
ENSAOCG00000009003RPA110050.307ENSMMUG00000002442-9950.460Macaca_mulatta
ENSAOCG00000009003RPA19755.309ENSMMUG00000011604-9855.556Macaca_mulatta
ENSAOCG00000009003RPA17958.784ENSMNEG00000029837-9558.784Macaca_nemestrina
ENSAOCG00000009003RPA19654.864ENSMNEG00000031632-9855.112Macaca_nemestrina
ENSAOCG00000009003RPA19752.050ENSMLEG00000038768-9852.298Mandrillus_leucophaeus
ENSAOCG00000009003RPA19978.009ENSMAMG00000020097RPA19978.009Mastacembelus_armatus
ENSAOCG00000009003RPA19958.760ENSMAMG00000017993rpa19958.469Mastacembelus_armatus
ENSAOCG00000009003RPA19981.481ENSMZEG00005024731RPA19981.481Maylandia_zebra
ENSAOCG00000009003RPA19959.070ENSMZEG00005007551rpa19958.887Maylandia_zebra
ENSAOCG00000009003RPA19953.571ENSMGAG00000005315RPA19853.446Meleagris_gallopavo
ENSAOCG00000009003RPA19654.936ENSMAUG00000010474Rpa19854.502Mesocricetus_auratus
ENSAOCG00000009003RPA19955.624ENSMICG00000012867RPA19954.338Microcebus_murinus
ENSAOCG00000009003RPA19953.621ENSMOCG00000013019Rpa19952.824Microtus_ochrogaster
ENSAOCG00000009003RPA19759.011ENSMMOG00000014292rpa19959.011Mola_mola
ENSAOCG00000009003RPA19873.709ENSMMOG00000010868RPA19882.110Mola_mola
ENSAOCG00000009003RPA110054.977ENSMODG00000010549RPA19954.009Monodelphis_domestica
ENSAOCG00000009003RPA19958.879ENSMALG00000011453rpa19958.567Monopterus_albus
ENSAOCG00000009003RPA110072.601ENSMALG00000001208RPA19783.750Monopterus_albus
ENSAOCG00000009003RPA19954.729MGP_CAROLIEiJ_G0016734Rpa19954.574Mus_caroli
ENSAOCG00000009003RPA19954.574ENSMUSG00000000751Rpa19954.574Mus_musculus
ENSAOCG00000009003RPA19954.884MGP_PahariEiJ_G0017871Rpa19954.884Mus_pahari
ENSAOCG00000009003RPA19954.799MGP_SPRETEiJ_G0017577Rpa19954.799Mus_spretus
ENSAOCG00000009003RPA19954.096ENSMPUG00000013119RPA19953.456Mustela_putorius_furo
ENSAOCG00000009003RPA19755.714ENSMLUG00000006113RPA19554.732Myotis_lucifugus
ENSAOCG00000009003RPA19655.288ENSNGAG00000004522Rpa19454.818Nannospalax_galili
ENSAOCG00000009003RPA19559.283ENSNBRG00000020595rpa19959.772Neolamprologus_brichardi
ENSAOCG00000009003RPA19872.006ENSNBRG00000009672RPA19771.540Neolamprologus_brichardi
ENSAOCG00000009003RPA19954.839ENSNLEG00000017149RPA19954.685Nomascus_leucogenys
ENSAOCG00000009003RPA18859.794ENSMEUG00000006714RPA18859.794Notamacropus_eugenii
ENSAOCG00000009003RPA19654.880ENSODEG00000009038RPA19654.880Octodon_degus
ENSAOCG00000009003RPA19958.669ENSONIG00000013135rpa19958.642Oreochromis_niloticus
ENSAOCG00000009003RPA19754.675ENSOANG00000010880RPA19854.976Ornithorhynchus_anatinus
ENSAOCG00000009003RPA19953.064ENSOCUG00000001504RPA19951.857Oryctolagus_cuniculus
ENSAOCG00000009003RPA19975.340ENSORLG00000003368RPA19975.340Oryzias_latipes
ENSAOCG00000009003RPA19958.385ENSORLG00000004856rpa19958.540Oryzias_latipes
ENSAOCG00000009003RPA19958.851ENSORLG00020008980rpa19958.540Oryzias_latipes_hni
ENSAOCG00000009003RPA19974.146ENSORLG00020015284RPA19974.146Oryzias_latipes_hni
ENSAOCG00000009003RPA16781.465ENSORLG00015005867-9981.465Oryzias_latipes_hsok
ENSAOCG00000009003RPA19975.535ENSORLG00015020383RPA19975.535Oryzias_latipes_hsok
ENSAOCG00000009003RPA19958.851ENSORLG00015013982rpa19958.540Oryzias_latipes_hsok
ENSAOCG00000009003RPA19673.397ENSOMEG00000011040RPA19872.713Oryzias_melastigma
ENSAOCG00000009003RPA19957.609ENSOMEG00000004704rpa19957.298Oryzias_melastigma
ENSAOCG00000009003RPA18165.000ENSOGAG00000029379-9965.000Otolemur_garnettii
ENSAOCG00000009003RPA19955.146ENSOGAG00000005581-9955.300Otolemur_garnettii
ENSAOCG00000009003RPA19953.610ENSOARG00000014479RPA19954.321Ovis_aries
ENSAOCG00000009003RPA19954.992ENSPPAG00000039680RPA19954.992Pan_paniscus
ENSAOCG00000009003RPA19955.146ENSPPRG00000011807RPA19955.146Panthera_pardus
ENSAOCG00000009003RPA19955.178ENSPTIG00000007898RPA19955.178Panthera_tigris_altaica
ENSAOCG00000009003RPA19954.992ENSPTRG00000008539RPA19954.839Pan_troglodytes
ENSAOCG00000009003RPA110054.518ENSPANG00000024592RPA19954.755Papio_anubis
ENSAOCG00000009003RPA19560.032ENSPKIG00000008053rpa19460.064Paramormyrops_kingsleyae
ENSAOCG00000009003RPA19755.309ENSPSIG00000015617RPA19855.167Pelodiscus_sinensis
ENSAOCG00000009003RPA110066.667ENSPMGG00000000543RPA19969.702Periophthalmus_magnuspinnatus
ENSAOCG00000009003RPA19658.880ENSPMGG00000011589rpa19858.682Periophthalmus_magnuspinnatus
ENSAOCG00000009003RPA19954.109ENSPEMG00000021061Rpa19954.109Peromyscus_maniculatus_bairdii
ENSAOCG00000009003RPA110053.988ENSPCIG00000019049RPA19954.448Phascolarctos_cinereus
ENSAOCG00000009003RPA19959.259ENSPFOG00000003987rpa19959.105Poecilia_formosa
ENSAOCG00000009003RPA19577.157ENSPLAG00000008844-9777.157Poecilia_latipinna
ENSAOCG00000009003RPA19959.259ENSPLAG00000004984rpa19959.105Poecilia_latipinna
ENSAOCG00000009003RPA19577.476ENSPMEG00000003627-9777.476Poecilia_mexicana
ENSAOCG00000009003RPA19959.259ENSPMEG00000020602rpa19959.180Poecilia_mexicana
ENSAOCG00000009003RPA19973.939ENSPREG00000010119RPA110073.313Poecilia_reticulata
ENSAOCG00000009003RPA19752.765ENSPREG00000010174rpa19951.975Poecilia_reticulata
ENSAOCG00000009003RPA19955.162ENSPCOG00000001799RPA19955.162Propithecus_coquereli
ENSAOCG00000009003RPA19955.146ENSPVAG00000002149RPA19953.740Pteropus_vampyrus
ENSAOCG00000009003RPA19959.225ENSPNYG00000016316rpa19960.131Pundamilia_nyererei
ENSAOCG00000009003RPA19981.173ENSPNYG00000024165RPA19981.173Pundamilia_nyererei
ENSAOCG00000009003RPA110052.227ENSPNAG00000008599rpa19952.294Pygocentrus_nattereri
ENSAOCG00000009003RPA19954.644ENSRNOG00000003123Rpa19955.039Rattus_norvegicus
ENSAOCG00000009003RPA110054.908ENSRBIG00000036587RPA19954.601Rhinopithecus_bieti
ENSAOCG00000009003RPA110051.687ENSRROG00000043278RPA19951.380Rhinopithecus_roxellana
ENSAOCG00000009003RPA19255.184ENSSBOG00000030233RPA19754.742Saimiri_boliviensis_boliviensis
ENSAOCG00000009003RPA19855.745ENSSHAG00000007969RPA19855.300Sarcophilus_harrisii
ENSAOCG00000009003RPA110061.598ENSSFOG00015005362rpa19260.769Scleropages_formosus
ENSAOCG00000009003RPA110077.280ENSSMAG00000019746RPA110077.410Scophthalmus_maximus
ENSAOCG00000009003RPA110078.088ENSSDUG00000016358RPA110078.824Seriola_dumerili
ENSAOCG00000009003RPA19959.690ENSSDUG00000011949rpa19959.380Seriola_dumerili
ENSAOCG00000009003RPA19959.535ENSSLDG00000011806rpa19959.259Seriola_lalandi_dorsalis
ENSAOCG00000009003RPA110077.810ENSSLDG00000020784RPA110077.956Seriola_lalandi_dorsalis
ENSAOCG00000009003RPA18251.504ENSSARG00000007506RPA18250.940Sorex_araneus
ENSAOCG00000009003RPA19752.208ENSSPUG00000007223RPA19852.441Sphenodon_punctatus
ENSAOCG00000009003RPA19958.760ENSSPAG00000009903rpa19958.605Stegastes_partitus
ENSAOCG00000009003RPA19980.000ENSSPAG00000011165RPA19880.000Stegastes_partitus
ENSAOCG00000009003RPA19755.468ENSSSCG00000017822RPA19662.584Sus_scrofa
ENSAOCG00000009003RPA19952.923ENSTGUG00000005775RPA19953.149Taeniopygia_guttata
ENSAOCG00000009003RPA19967.742ENSTRUG00000000405RPA19967.181Takifugu_rubripes
ENSAOCG00000009003RPA19957.453ENSTRUG00000003616rpa19957.298Takifugu_rubripes
ENSAOCG00000009003RPA19959.259ENSTNIG00000016199rpa19959.014Tetraodon_nigroviridis
ENSAOCG00000009003RPA16764.091ENSTBEG00000002709RPA17464.091Tupaia_belangeri
ENSAOCG00000009003RPA19954.083ENSTTRG00000001169RPA19954.071Tursiops_truncatus
ENSAOCG00000009003RPA18775.000ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSAOCG00000009003RPA19953.632ENSUMAG00000009328RPA19563.182Ursus_maritimus
ENSAOCG00000009003RPA19953.106ENSVPAG00000009443RPA19952.950Vicugna_pacos
ENSAOCG00000009003RPA19954.012ENSVVUG00000021715RPA19954.154Vulpes_vulpes
ENSAOCG00000009003RPA19955.796ENSXETG00000013538rpa19956.105Xenopus_tropicalis
ENSAOCG00000009003RPA19457.990ENSXCOG00000010068rpa19458.404Xiphophorus_couchianus
ENSAOCG00000009003RPA19672.419ENSXCOG00000009899-9971.774Xiphophorus_couchianus
ENSAOCG00000009003RPA19958.514ENSXMAG00000004102rpa19958.746Xiphophorus_maculatus
ENSAOCG00000009003RPA19971.857ENSXMAG00000010333RPA19971.857Xiphophorus_maculatus

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