EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000009647 (Gene tree)
Gene ID: 111574692
Gene Symbol: -
Alias: -
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 86367 bases
Position: chrNXFZ01002998.1:304131-390497
Accession: 111574692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000005975	ResIII	PF04851.15	5.4e-08	1	1
ENSAOCP00000023437	ResIII	PF04851.15	6.1e-08	1	1
ENSAOCP00000005975	BRK	PF07533.16	1.9e-17	1	1
ENSAOCP00000023437	BRK	PF07533.16	1.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000005388	-	4641	-	ENSAOCP00000005975	1546 (aa)	-	-
ENSAOCT00000005364	-	8813	XM_023279410	ENSAOCP00000023437	1584 (aa)	XP_023135178	UPI000C2FF3BC

Gene Model

Click here to download ENSAOCG00000009647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000009647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000009647	-	86	73.786	ENSAOCG00000019167	smarca4a	100	73.184
ENSAOCG00000009647	-	91	72.715	ENSAOCG00000009450	-	97	72.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000009647	-	97	78.767	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSAOCG00000009647	-	100	98.738	ENSAPOG00000002641	SMARCA2	100	98.738	Acanthochromis_polyacanthus
ENSAOCG00000009647	-	88	77.364	ENSAMEG00000012325	SMARCA2	99	85.379	Ailuropoda_melanoleuca
ENSAOCG00000009647	-	99	92.456	ENSACIG00000015607	SMARCA2	100	90.574	Amphilophus_citrinellus
ENSAOCG00000009647	-	100	99.684	ENSAPEG00000007646	SMARCA2	100	99.684	Amphiprion_percula
ENSAOCG00000009647	-	99	94.121	ENSATEG00000006916	SMARCA2	98	94.121	Anabas_testudineus
ENSAOCG00000009647	-	87	78.091	ENSAPLG00000013873	SMARCA2	93	77.847	Anas_platyrhynchos
ENSAOCG00000009647	-	97	79.627	ENSACAG00000002423	SMARCA2	100	79.323	Anolis_carolinensis
ENSAOCG00000009647	-	97	80.052	ENSANAG00000026498	SMARCA2	100	80.364	Aotus_nancymaae
ENSAOCG00000009647	-	100	92.124	ENSACLG00000004248	SMARCA2	100	92.376	Astatotilapia_calliptera
ENSAOCG00000009647	-	99	86.139	ENSAMXG00000012404	smarca2	100	85.287	Astyanax_mexicanus
ENSAOCG00000009647	-	97	79.731	ENSBTAG00000007494	SMARCA2	100	79.925	Bos_taurus
ENSAOCG00000009647	-	97	80.415	ENSCJAG00000010710	SMARCA2	100	80.100	Callithrix_jacchus
ENSAOCG00000009647	-	97	80.949	ENSCAFG00000002013	SMARCA2	100	80.050	Canis_familiaris
ENSAOCG00000009647	-	75	85.849	ENSCAFG00020026802	SMARCA2	94	86.438	Canis_lupus_dingo
ENSAOCG00000009647	-	97	79.859	ENSCHIG00000025863	SMARCA2	100	79.925	Capra_hircus
ENSAOCG00000009647	-	97	77.976	ENSTSYG00000003858	SMARCA2	99	80.480	Carlito_syrichta
ENSAOCG00000009647	-	97	78.837	ENSCAPG00000002890	SMARCA2	99	78.613	Cavia_aperea
ENSAOCG00000009647	-	97	80.363	ENSCPOG00000005475	SMARCA2	100	80.678	Cavia_porcellus
ENSAOCG00000009647	-	97	80.196	ENSCCAG00000030636	SMARCA2	100	80.615	Cebus_capucinus
ENSAOCG00000009647	-	97	79.118	ENSCATG00000031470	SMARCA2	100	80.388	Cercocebus_atys
ENSAOCG00000009647	-	97	80.233	ENSCLAG00000014484	SMARCA2	100	80.388	Chinchilla_lanigera
ENSAOCG00000009647	-	92	81.628	ENSCSAG00000008650	SMARCA2	99	81.702	Chlorocebus_sabaeus
ENSAOCG00000009647	-	83	81.330	ENSCHOG00000004316	SMARCA2	86	81.330	Choloepus_hoffmanni
ENSAOCG00000009647	-	96	82.504	ENSCPBG00000025463	SMARCA2	100	82.650	Chrysemys_picta_bellii
ENSAOCG00000009647	-	97	80.419	ENSCANG00000039597	SMARCA2	100	80.803	Colobus_angolensis_palliatus
ENSAOCG00000009647	-	97	74.853	ENSCGRG00001002323	Smarca2	100	74.828	Cricetulus_griseus_chok1gshd
ENSAOCG00000009647	-	100	87.291	ENSCSEG00000019311	SMARCA2	98	87.646	Cynoglossus_semilaevis
ENSAOCG00000009647	-	85	88.165	ENSCVAG00000016571	SMARCA2	98	88.362	Cyprinodon_variegatus
ENSAOCG00000009647	-	100	84.774	ENSDARG00000008904	smarca2	100	84.461	Danio_rerio
ENSAOCG00000009647	-	97	79.731	ENSDNOG00000006402	SMARCA2	100	79.514	Dasypus_novemcinctus
ENSAOCG00000009647	-	97	79.923	ENSDORG00000014832	Smarca2	100	80.427	Dipodomys_ordii
ENSAOCG00000009647	-	79	61.645	FBgn0000212	brm	83	56.774	Drosophila_melanogaster
ENSAOCG00000009647	-	95	70.348	ENSEBUG00000011442	-	97	68.887	Eptatretus_burgeri
ENSAOCG00000009647	-	84	62.971	ENSEBUG00000002449	-	93	63.158	Eptatretus_burgeri
ENSAOCG00000009647	-	97	80.620	ENSEASG00005010312	SMARCA2	100	79.925	Equus_asinus_asinus
ENSAOCG00000009647	-	62	85.294	ENSEEUG00000015540	-	69	78.378	Erinaceus_europaeus
ENSAOCG00000009647	-	95	83.716	ENSELUG00000010318	smarca2	99	82.440	Esox_lucius
ENSAOCG00000009647	-	96	80.823	ENSFCAG00000001568	SMARCA2	100	79.925	Felis_catus
ENSAOCG00000009647	-	97	80.090	ENSFALG00000010416	SMARCA2	100	81.849	Ficedula_albicollis
ENSAOCG00000009647	-	97	79.315	ENSFDAG00000010502	SMARCA2	100	78.532	Fukomys_damarensis
ENSAOCG00000009647	-	100	92.125	ENSFHEG00000021250	SMARCA2	100	92.625	Fundulus_heteroclitus
ENSAOCG00000009647	-	99	83.591	ENSGMOG00000014229	SMARCA2	99	83.097	Gadus_morhua
ENSAOCG00000009647	-	97	80.411	ENSGALG00000010164	SMARCA2	100	80.401	Gallus_gallus
ENSAOCG00000009647	-	95	83.566	ENSGAFG00000001164	SMARCA2	95	83.498	Gambusia_affinis
ENSAOCG00000009647	-	99	89.460	ENSGACG00000014488	SMARCA2	99	89.270	Gasterosteus_aculeatus
ENSAOCG00000009647	-	97	80.539	ENSGAGG00000024412	SMARCA2	100	80.213	Gopherus_agassizii
ENSAOCG00000009647	-	97	78.818	ENSGGOG00000000513	SMARCA2	98	78.827	Gorilla_gorilla
ENSAOCG00000009647	-	100	93.585	ENSHBUG00000006691	SMARCA2	100	93.836	Haplochromis_burtoni
ENSAOCG00000009647	-	97	79.754	ENSHGLG00000005215	SMARCA2	98	80.051	Heterocephalus_glaber_female
ENSAOCG00000009647	-	97	80.754	ENSHGLG00100010496	SMARCA2	100	80.113	Heterocephalus_glaber_male
ENSAOCG00000009647	-	90	83.297	ENSHCOG00000015348	-	95	88.075	Hippocampus_comes
ENSAOCG00000009647	-	99	84.411	ENSIPUG00000011060	smarca2	100	82.590	Ictalurus_punctatus
ENSAOCG00000009647	-	97	80.116	ENSSTOG00000006812	SMARCA2	100	80.225	Ictidomys_tridecemlineatus
ENSAOCG00000009647	-	97	79.896	ENSJJAG00000010867	Smarca2	100	80.038	Jaculus_jaculus
ENSAOCG00000009647	-	100	92.509	ENSKMAG00000015844	-	100	92.821	Kryptolebias_marmoratus
ENSAOCG00000009647	-	96	83.173	ENSLOCG00000011499	smarca2	99	82.636	Lepisosteus_oculatus
ENSAOCG00000009647	-	97	79.577	ENSLAFG00000014061	SMARCA2	100	79.751	Loxodonta_africana
ENSAOCG00000009647	-	97	78.784	ENSMFAG00000003814	SMARCA2	100	80.050	Macaca_fascicularis
ENSAOCG00000009647	-	97	80.309	ENSMMUG00000015279	SMARCA2	100	80.678	Macaca_mulatta
ENSAOCG00000009647	-	97	79.699	ENSMNEG00000041069	SMARCA2	100	80.326	Macaca_nemestrina
ENSAOCG00000009647	-	97	79.213	ENSMLEG00000027418	SMARCA2	99	80.877	Mandrillus_leucophaeus
ENSAOCG00000009647	-	100	93.075	ENSMAMG00000003056	SMARCA2	100	93.200	Mastacembelus_armatus
ENSAOCG00000009647	-	100	94.014	ENSMZEG00005020709	SMARCA2	100	94.266	Maylandia_zebra
ENSAOCG00000009647	-	74	68.164	ENSMGAG00000005160	-	100	67.635	Meleagris_gallopavo
ENSAOCG00000009647	-	97	80.368	ENSMICG00000005162	SMARCA2	100	80.552	Microcebus_murinus
ENSAOCG00000009647	-	97	80.352	ENSMOCG00000001611	Smarca2	100	80.138	Microtus_ochrogaster
ENSAOCG00000009647	-	99	87.700	ENSMMOG00000014196	SMARCA2	99	86.886	Mola_mola
ENSAOCG00000009647	-	96	80.547	ENSMODG00000003578	SMARCA2	100	80.326	Monodelphis_domestica
ENSAOCG00000009647	-	99	91.478	ENSMALG00000009611	SMARCA2	99	91.321	Monopterus_albus
ENSAOCG00000009647	-	96	79.739	MGP_CAROLIEiJ_G0022841	Smarca2	100	79.229	Mus_caroli
ENSAOCG00000009647	-	96	79.857	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSAOCG00000009647	-	96	81.042	MGP_PahariEiJ_G0014334	Smarca2	100	79.426	Mus_pahari
ENSAOCG00000009647	-	96	79.805	MGP_SPRETEiJ_G0023759	Smarca2	97	90.909	Mus_spretus
ENSAOCG00000009647	-	80	84.264	ENSMPUG00000005171	SMARCA2	94	85.179	Mustela_putorius_furo
ENSAOCG00000009647	-	97	76.054	ENSMLUG00000002342	SMARCA2	99	76.268	Myotis_lucifugus
ENSAOCG00000009647	-	97	79.132	ENSNGAG00000000108	Smarca2	99	78.826	Nannospalax_galili
ENSAOCG00000009647	-	95	79.445	ENSNBRG00000017998	SMARCA2	94	88.889	Neolamprologus_brichardi
ENSAOCG00000009647	-	97	79.068	ENSNLEG00000008575	SMARCA2	100	79.310	Nomascus_leucogenys
ENSAOCG00000009647	-	93	74.813	ENSMEUG00000009812	SMARCA2	100	72.953	Notamacropus_eugenii
ENSAOCG00000009647	-	81	80.143	ENSOPRG00000013474	SMARCA2	100	75.529	Ochotona_princeps
ENSAOCG00000009647	-	81	84.548	ENSODEG00000005452	SMARCA2	98	80.025	Octodon_degus
ENSAOCG00000009647	-	99	93.169	ENSONIG00000014163	SMARCA2	99	93.232	Oreochromis_niloticus
ENSAOCG00000009647	-	80	85.555	ENSOCUG00000006320	SMARCA2	100	79.439	Oryctolagus_cuniculus
ENSAOCG00000009647	-	100	92.506	ENSORLG00000020820	SMARCA2	100	92.695	Oryzias_latipes
ENSAOCG00000009647	-	100	92.506	ENSORLG00015006289	SMARCA2	100	92.632	Oryzias_latipes_hsok
ENSAOCG00000009647	-	100	92.119	ENSOMEG00000009736	-	100	92.560	Oryzias_melastigma
ENSAOCG00000009647	-	79	85.851	ENSOGAG00000017053	SMARCA2	99	79.408	Otolemur_garnettii
ENSAOCG00000009647	-	97	78.735	ENSOARG00000013265	SMARCA2	100	79.161	Ovis_aries
ENSAOCG00000009647	-	97	79.357	ENSPPAG00000038717	SMARCA2	100	81.032	Pan_paniscus
ENSAOCG00000009647	-	96	80.889	ENSPPRG00000001879	SMARCA2	100	79.987	Panthera_pardus
ENSAOCG00000009647	-	97	79.961	ENSPTRG00000051168	SMARCA2	100	80.401	Pan_troglodytes
ENSAOCG00000009647	-	97	76.803	ENSPANG00000025121	SMARCA2	100	76.033	Papio_anubis
ENSAOCG00000009647	-	100	84.456	ENSPKIG00000018469	-	100	84.015	Paramormyrops_kingsleyae
ENSAOCG00000009647	-	97	80.321	ENSPSIG00000006284	SMARCA2	100	80.062	Pelodiscus_sinensis
ENSAOCG00000009647	-	99	84.720	ENSPMGG00000013696	-	98	84.821	Periophthalmus_magnuspinnatus
ENSAOCG00000009647	-	97	79.627	ENSPEMG00000019821	Smarca2	100	79.461	Peromyscus_maniculatus_bairdii
ENSAOCG00000009647	-	95	70.618	ENSPMAG00000005337	-	97	69.557	Petromyzon_marinus
ENSAOCG00000009647	-	97	80.739	ENSPCIG00000015658	SMARCA2	100	80.388	Phascolarctos_cinereus
ENSAOCG00000009647	-	100	91.980	ENSPFOG00000001856	SMARCA2	100	92.231	Poecilia_formosa
ENSAOCG00000009647	-	99	91.593	ENSPLAG00000017829	SMARCA2	96	91.846	Poecilia_latipinna
ENSAOCG00000009647	-	99	91.524	ENSPMEG00000001815	-	99	91.708	Poecilia_mexicana
ENSAOCG00000009647	-	100	91.277	ENSPREG00000013800	SMARCA2	100	91.526	Poecilia_reticulata
ENSAOCG00000009647	-	97	79.895	ENSPPYG00000019258	SMARCA2	100	80.176	Pongo_abelii
ENSAOCG00000009647	-	76	73.944	ENSPCAG00000016969	SMARCA2	78	73.944	Procavia_capensis
ENSAOCG00000009647	-	97	78.478	ENSPCOG00000025709	SMARCA2	100	78.356	Propithecus_coquereli
ENSAOCG00000009647	-	90	82.528	ENSPVAG00000000901	SMARCA2	94	81.718	Pteropus_vampyrus
ENSAOCG00000009647	-	100	90.446	ENSPNYG00000004533	SMARCA2	100	90.446	Pundamilia_nyererei
ENSAOCG00000009647	-	99	86.320	ENSPNAG00000014635	smarca2	98	86.392	Pygocentrus_nattereri
ENSAOCG00000009647	-	97	79.543	ENSRNOG00000011931	Smarca2	100	78.392	Rattus_norvegicus
ENSAOCG00000009647	-	97	79.475	ENSRBIG00000038618	SMARCA2	95	86.072	Rhinopithecus_bieti
ENSAOCG00000009647	-	97	79.156	ENSRROG00000019271	SMARCA2	99	81.281	Rhinopithecus_roxellana
ENSAOCG00000009647	-	91	85.500	ENSSBOG00000034827	SMARCA2	96	85.526	Saimiri_boliviensis_boliviensis
ENSAOCG00000009647	-	97	80.514	ENSSHAG00000007884	SMARCA2	100	80.502	Sarcophilus_harrisii
ENSAOCG00000009647	-	92	84.919	ENSSFOG00015014870	SMARCA2	97	86.125	Scleropages_formosus
ENSAOCG00000009647	-	100	91.771	ENSSMAG00000013707	SMARCA2	100	92.269	Scophthalmus_maximus
ENSAOCG00000009647	-	100	92.081	ENSSDUG00000008852	-	100	92.327	Seriola_dumerili
ENSAOCG00000009647	-	99	89.854	ENSSLDG00000025449	SMARCA2	98	89.942	Seriola_lalandi_dorsalis
ENSAOCG00000009647	-	86	84.526	ENSSARG00000007888	SMARCA2	82	84.526	Sorex_araneus
ENSAOCG00000009647	-	95	77.326	ENSSPUG00000001629	SMARCA2	98	77.617	Sphenodon_punctatus
ENSAOCG00000009647	-	100	97.292	ENSSPAG00000020091	-	100	97.292	Stegastes_partitus
ENSAOCG00000009647	-	97	79.387	ENSSSCG00000005232	SMARCA2	100	79.825	Sus_scrofa
ENSAOCG00000009647	-	97	79.897	ENSTGUG00000005460	SMARCA2	100	80.276	Taeniopygia_guttata
ENSAOCG00000009647	-	99	89.660	ENSTRUG00000015619	SMARCA2	99	90.032	Takifugu_rubripes
ENSAOCG00000009647	-	62	97.619	ENSTBEG00000008767	SMARCA2	68	97.619	Tupaia_belangeri
ENSAOCG00000009647	-	93	79.947	ENSTTRG00000002033	SMARCA2	95	80.452	Tursiops_truncatus
ENSAOCG00000009647	-	87	81.440	ENSUAMG00000024701	SMARCA2	99	80.403	Ursus_americanus
ENSAOCG00000009647	-	90	73.218	ENSVPAG00000001204	SMARCA2	98	73.554	Vicugna_pacos
ENSAOCG00000009647	-	75	85.518	ENSVVUG00000004598	SMARCA2	96	86.106	Vulpes_vulpes
ENSAOCG00000009647	-	100	76.728	ENSXETG00000015299	smarca2	100	74.666	Xenopus_tropicalis
ENSAOCG00000009647	-	90	88.040	ENSXCOG00000011073	SMARCA2	99	87.960	Xiphophorus_couchianus
ENSAOCG00000009647	-	100	91.107	ENSXMAG00000015611	SMARCA2	100	91.418	Xiphophorus_maculatus