EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAOCG00000010077 (Gene tree)
Gene ID
111565927
Gene Symbol
CPSF3 (1 of many)
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Plus strand
Length
9283 bases
Position
chrNXFZ01001956.1:405915-415197
Accession
111565927
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000006422CPSF73-100_CPF11718.85.6e-5211
ENSAOCP00000006408CPSF73-100_CPF11718.87.7e-4511
ENSAOCP00000006408Beta-CaspPF10996.87.3e-3411
ENSAOCP00000006422Beta-CaspPF10996.87.6e-3411
ENSAOCP00000006422Lactamase_BPF00753.271.4e-1811
ENSAOCP00000006408Lactamase_BPF00753.273.3e-0811
ENSAOCP00000006408RMMBLPF07521.124.7e-2111
ENSAOCP00000006422RMMBLPF07521.125.6e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000004663CPSF3 (1 of many)-2021851-ENSAOCP00000006408616 (aa)--
ENSAOCT00000004634CPSF3 (1 of many)-2014927XM_023266241ENSAOCP00000006422690 (aa)XP_023122009UPI000C31320A
Gene Model
Click here to download ENSAOCG00000010077's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000010077's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAOCG00000010077CPSF310087.826ENSAOCG00000022056cpsf310089.650
ENSAOCG00000010077CPSF36937.910ENSAOCG00000021172ints118037.910
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000010077CPSF39887.941ENSG00000119203CPSF3100100.000Homo_sapiens
ENSAOCG00000010077CPSF37499.804ENSAPOG00000012241CPSF39199.804Acanthochromis_polyacanthus
ENSAOCG00000010077CPSF310087.971ENSAPOG00000022087cpsf39989.116Acanthochromis_polyacanthus
ENSAOCG00000010077CPSF39888.235ENSAMEG00000008493CPSF39988.235Ailuropoda_melanoleuca
ENSAOCG00000010077CPSF310092.936ENSACIG00000023663CPSF310092.936Amphilophus_citrinellus
ENSAOCG00000010077CPSF39986.032ENSACIG00000009846cpsf39986.032Amphilophus_citrinellus
ENSAOCG00000010077CPSF310087.971ENSAPEG00000019526cpsf39989.210Amphiprion_percula
ENSAOCG00000010077CPSF3100100.000ENSAPEG00000021167CPSF3100100.000Amphiprion_percula
ENSAOCG00000010077CPSF39988.663ENSATEG00000003959cpsf39988.663Anabas_testudineus
ENSAOCG00000010077CPSF310090.290ENSATEG00000014525CPSF310090.290Anabas_testudineus
ENSAOCG00000010077CPSF39787.779ENSAPLG00000006941CPSF39887.779Anas_platyrhynchos
ENSAOCG00000010077CPSF39982.726ENSACAG00000001759CPSF39985.197Anolis_carolinensis
ENSAOCG00000010077CPSF39882.353ENSANAG00000031254CPSF39982.759Aotus_nancymaae
ENSAOCG00000010077CPSF39986.699ENSACLG00000014484cpsf39989.006Astatotilapia_calliptera
ENSAOCG00000010077CPSF39896.355ENSACLG00000018846CPSF310093.407Astatotilapia_calliptera
ENSAOCG00000010077CPSF310089.565ENSAMXG00000004786cpsf310089.565Astyanax_mexicanus
ENSAOCG00000010077CPSF39888.235ENSBTAG00000019735CPSF39988.235Bos_taurus
ENSAOCG00000010077CPSF38957.911WBGene00013460cpsf-38957.911Caenorhabditis_elegans
ENSAOCG00000010077CPSF39887.794ENSCJAG00000006276CPSF39987.794Callithrix_jacchus
ENSAOCG00000010077CPSF39888.235ENSCAFG00000003375CPSF39588.235Canis_familiaris
ENSAOCG00000010077CPSF38991.071ENSCAFG00020026799CPSF39991.071Canis_lupus_dingo
ENSAOCG00000010077CPSF39888.235ENSCHIG00000013973CPSF39988.235Capra_hircus
ENSAOCG00000010077CPSF39887.941ENSTSYG00000002967CPSF39987.941Carlito_syrichta
ENSAOCG00000010077CPSF39687.988ENSCAPG00000013851CPSF39987.988Cavia_aperea
ENSAOCG00000010077CPSF39888.088ENSCPOG00000011299CPSF39988.088Cavia_porcellus
ENSAOCG00000010077CPSF39887.794ENSCCAG00000036730CPSF39987.794Cebus_capucinus
ENSAOCG00000010077CPSF39886.176ENSCATG00000014770CPSF39993.599Cercocebus_atys
ENSAOCG00000010077CPSF39887.941ENSCLAG00000002727CPSF39987.941Chinchilla_lanigera
ENSAOCG00000010077CPSF39880.000ENSCSAG00000007125CPSF39980.000Chlorocebus_sabaeus
ENSAOCG00000010077CPSF385100.000ENSCHOG00000000180CPSF38563.093Choloepus_hoffmanni
ENSAOCG00000010077CPSF39987.246ENSCPBG00000014074CPSF39987.246Chrysemys_picta_bellii
ENSAOCG00000010077CPSF39868.082ENSCING00000007214-9868.082Ciona_intestinalis
ENSAOCG00000010077CPSF39877.664ENSCANG00000034435CPSF39977.664Colobus_angolensis_palliatus
ENSAOCG00000010077CPSF39887.941ENSCGRG00001013134Cpsf39987.941Cricetulus_griseus_chok1gshd
ENSAOCG00000010077CPSF39887.941ENSCGRG00000018319Cpsf39987.941Cricetulus_griseus_crigri
ENSAOCG00000010077CPSF310093.343ENSCSEG00000002021CPSF310093.663Cynoglossus_semilaevis
ENSAOCG00000010077CPSF310096.377ENSCVAG00000015067CPSF310096.377Cyprinodon_variegatus
ENSAOCG00000010077CPSF310090.145ENSDARG00000027649cpsf310090.145Danio_rerio
ENSAOCG00000010077CPSF39887.078ENSDNOG00000008940CPSF39587.078Dasypus_novemcinctus
ENSAOCG00000010077CPSF39488.889ENSDORG00000014263Cpsf39988.889Dipodomys_ordii
ENSAOCG00000010077CPSF39966.327FBgn0261065Cpsf739966.327Drosophila_melanogaster
ENSAOCG00000010077CPSF39476.852ENSETEG00000003893CPSF39976.852Echinops_telfairi
ENSAOCG00000010077CPSF39975.775ENSEBUG00000009018cpsf39976.197Eptatretus_burgeri
ENSAOCG00000010077CPSF39888.235ENSEASG00005003970CPSF39988.235Equus_asinus_asinus
ENSAOCG00000010077CPSF39888.235ENSECAG00000019911CPSF39693.243Equus_caballus
ENSAOCG00000010077CPSF39872.941ENSEEUG00000015422CPSF39972.941Erinaceus_europaeus
ENSAOCG00000010077CPSF39991.424ENSELUG00000013775cpsf39991.424Esox_lucius
ENSAOCG00000010077CPSF39888.235ENSFCAG00000007852CPSF39988.235Felis_catus
ENSAOCG00000010077CPSF39984.444ENSFALG00000006572CPSF39987.616Ficedula_albicollis
ENSAOCG00000010077CPSF39887.334ENSFDAG00000006317CPSF39987.334Fukomys_damarensis
ENSAOCG00000010077CPSF35980.000ENSFHEG00000012186CPSF310080.000Fundulus_heteroclitus
ENSAOCG00000010077CPSF39986.483ENSFHEG00000014774cpsf39986.483Fundulus_heteroclitus
ENSAOCG00000010077CPSF310089.130ENSGMOG00000003157cpsf310089.130Gadus_morhua
ENSAOCG00000010077CPSF39986.919ENSGALG00000016424CPSF39986.919Gallus_gallus
ENSAOCG00000010077CPSF310095.797ENSGAFG00000008016CPSF310095.797Gambusia_affinis
ENSAOCG00000010077CPSF310085.692ENSGAFG00000019449cpsf310085.692Gambusia_affinis
ENSAOCG00000010077CPSF37281.370ENSGAGG00000025583CPSF39383.298Gopherus_agassizii
ENSAOCG00000010077CPSF39984.762ENSGGOG00000001757CPSF39198.065Gorilla_gorilla
ENSAOCG00000010077CPSF39988.808ENSHBUG00000001188cpsf39988.808Haplochromis_burtoni
ENSAOCG00000010077CPSF36391.791ENSHBUG00000014332CPSF310092.346Haplochromis_burtoni
ENSAOCG00000010077CPSF39887.629ENSHGLG00000000666CPSF39887.629Heterocephalus_glaber_female
ENSAOCG00000010077CPSF39887.629ENSHGLG00100007765CPSF39887.629Heterocephalus_glaber_male
ENSAOCG00000010077CPSF39994.630ENSHCOG00000015957CPSF39994.630Hippocampus_comes
ENSAOCG00000010077CPSF39987.083ENSHCOG00000007251cpsf39987.083Hippocampus_comes
ENSAOCG00000010077CPSF310089.565ENSIPUG00000023488cpsf310089.565Ictalurus_punctatus
ENSAOCG00000010077CPSF39888.088ENSSTOG00000004476CPSF39988.088Ictidomys_tridecemlineatus
ENSAOCG00000010077CPSF39887.647ENSJJAG00000023415Cpsf39987.647Jaculus_jaculus
ENSAOCG00000010077CPSF310086.812ENSKMAG00000002806cpsf310086.812Kryptolebias_marmoratus
ENSAOCG00000010077CPSF310097.826ENSKMAG00000007317CPSF310097.826Kryptolebias_marmoratus
ENSAOCG00000010077CPSF39982.267ENSLBEG00000020569cpsf39682.267Labrus_bergylta
ENSAOCG00000010077CPSF35882.880ENSLBEG00000015018-9982.880Labrus_bergylta
ENSAOCG00000010077CPSF39697.273ENSLBEG00000013492CPSF39997.273Labrus_bergylta
ENSAOCG00000010077CPSF310080.608ENSLACG00000008308CPSF310080.608Latimeria_chalumnae
ENSAOCG00000010077CPSF310090.188ENSLOCG00000016823cpsf310090.188Lepisosteus_oculatus
ENSAOCG00000010077CPSF39886.745ENSLAFG00000009467CPSF39986.745Loxodonta_africana
ENSAOCG00000010077CPSF39887.794ENSMFAG00000001339CPSF39495.208Macaca_fascicularis
ENSAOCG00000010077CPSF39984.603ENSMMUG00000018038CPSF39295.208Macaca_mulatta
ENSAOCG00000010077CPSF39993.500ENSMNEG00000039447CPSF39998.000Macaca_nemestrina
ENSAOCG00000010077CPSF39887.941ENSMLEG00000026825CPSF39297.854Mandrillus_leucophaeus
ENSAOCG00000010077CPSF310094.146ENSMAMG00000008835CPSF310094.146Mastacembelus_armatus
ENSAOCG00000010077CPSF39988.227ENSMAMG00000003076cpsf39988.227Mastacembelus_armatus
ENSAOCG00000010077CPSF39988.808ENSMZEG00005014358cpsf39988.808Maylandia_zebra
ENSAOCG00000010077CPSF310097.681ENSMZEG00005006258CPSF310097.681Maylandia_zebra
ENSAOCG00000010077CPSF39687.387ENSMGAG00000013995CPSF39987.387Meleagris_gallopavo
ENSAOCG00000010077CPSF35776.800ENSMAUG00000000166Cpsf39978.667Mesocricetus_auratus
ENSAOCG00000010077CPSF39883.063ENSMICG00000002363CPSF39983.063Microcebus_murinus
ENSAOCG00000010077CPSF39984.967ENSMOCG00000020067Cpsf39985.000Microtus_ochrogaster
ENSAOCG00000010077CPSF39983.633ENSMMOG00000018212CPSF39883.851Mola_mola
ENSAOCG00000010077CPSF37881.560ENSMMOG00000011923CPSF38581.560Mola_mola
ENSAOCG00000010077CPSF39886.900ENSMODG00000014703CPSF39986.900Monodelphis_domestica
ENSAOCG00000010077CPSF39691.639ENSMALG00000011474CPSF310091.420Monopterus_albus
ENSAOCG00000010077CPSF310088.551ENSMALG00000016416cpsf310088.551Monopterus_albus
ENSAOCG00000010077CPSF39887.647MGP_CAROLIEiJ_G0017640Cpsf39987.647Mus_caroli
ENSAOCG00000010077CPSF39887.647ENSMUSG00000054309Cpsf39698.305Mus_musculus
ENSAOCG00000010077CPSF39887.500MGP_PahariEiJ_G0029397Cpsf39987.500Mus_pahari
ENSAOCG00000010077CPSF39887.647MGP_SPRETEiJ_G0018481Cpsf39987.647Mus_spretus
ENSAOCG00000010077CPSF39888.218ENSMPUG00000013213CPSF39988.218Mustela_putorius_furo
ENSAOCG00000010077CPSF39888.106ENSMLUG00000010636CPSF39988.106Myotis_lucifugus
ENSAOCG00000010077CPSF39887.794ENSNGAG00000019836Cpsf39987.794Nannospalax_galili
ENSAOCG00000010077CPSF39896.355ENSNBRG00000010525CPSF310093.407Neolamprologus_brichardi
ENSAOCG00000010077CPSF39988.372ENSNBRG00000004770cpsf39988.372Neolamprologus_brichardi
ENSAOCG00000010077CPSF39887.794ENSNLEG00000013359CPSF39198.065Nomascus_leucogenys
ENSAOCG00000010077CPSF39857.353ENSMEUG00000013117-9957.353Notamacropus_eugenii
ENSAOCG00000010077CPSF39879.381ENSOPRG00000008902CPSF39979.381Ochotona_princeps
ENSAOCG00000010077CPSF39888.088ENSODEG00000003129CPSF39988.088Octodon_degus
ENSAOCG00000010077CPSF39988.808ENSONIG00000018812cpsf39988.808Oreochromis_niloticus
ENSAOCG00000010077CPSF38884.547ENSOANG00000008577CPSF39985.968Ornithorhynchus_anatinus
ENSAOCG00000010077CPSF39887.941ENSOCUG00000003728CPSF39987.941Oryctolagus_cuniculus
ENSAOCG00000010077CPSF39986.483ENSORLG00000018854cpsf39986.483Oryzias_latipes
ENSAOCG00000010077CPSF39986.337ENSORLG00020013331cpsf39986.337Oryzias_latipes_hni
ENSAOCG00000010077CPSF39986.483ENSORLG00015011017cpsf39986.483Oryzias_latipes_hsok
ENSAOCG00000010077CPSF310086.667ENSOMEG00000010647cpsf39686.667Oryzias_melastigma
ENSAOCG00000010077CPSF39877.794ENSOGAG00000001680CPSF39977.794Otolemur_garnettii
ENSAOCG00000010077CPSF39888.235ENSOARG00000015073CPSF39988.235Ovis_aries
ENSAOCG00000010077CPSF39887.941ENSPPAG00000042457CPSF39198.065Pan_paniscus
ENSAOCG00000010077CPSF39888.235ENSPPRG00000016790CPSF39988.235Panthera_pardus
ENSAOCG00000010077CPSF39888.365ENSPTIG00000003920CPSF39988.365Panthera_tigris_altaica
ENSAOCG00000010077CPSF39887.941ENSPTRG00000011638CPSF39198.065Pan_troglodytes
ENSAOCG00000010077CPSF39887.794ENSPANG00000016798CPSF39495.208Papio_anubis
ENSAOCG00000010077CPSF310091.304ENSPKIG00000023646cpsf310091.304Paramormyrops_kingsleyae
ENSAOCG00000010077CPSF39886.784ENSPSIG00000016144CPSF39986.784Pelodiscus_sinensis
ENSAOCG00000010077CPSF39985.366ENSPMGG00000006141-9985.366Periophthalmus_magnuspinnatus
ENSAOCG00000010077CPSF36387.811ENSPMGG00000015311CPSF310090.370Periophthalmus_magnuspinnatus
ENSAOCG00000010077CPSF39888.235ENSPEMG00000017668Cpsf39988.235Peromyscus_maniculatus_bairdii
ENSAOCG00000010077CPSF37989.541ENSPMAG00000004841cpsf310089.541Petromyzon_marinus
ENSAOCG00000010077CPSF39687.838ENSPCIG00000009823CPSF39888.190Phascolarctos_cinereus
ENSAOCG00000010077CPSF310086.667ENSPFOG00000015922cpsf310086.667Poecilia_formosa
ENSAOCG00000010077CPSF310095.217ENSPFOG00000010418-10095.217Poecilia_formosa
ENSAOCG00000010077CPSF35993.086ENSPLAG00000021300-10093.086Poecilia_latipinna
ENSAOCG00000010077CPSF310086.667ENSPLAG00000000882cpsf310086.667Poecilia_latipinna
ENSAOCG00000010077CPSF310086.812ENSPMEG00000018309cpsf310086.812Poecilia_mexicana
ENSAOCG00000010077CPSF310085.805ENSPREG00000014875cpsf310085.805Poecilia_reticulata
ENSAOCG00000010077CPSF310087.971ENSPREG00000004482CPSF310087.971Poecilia_reticulata
ENSAOCG00000010077CPSF39883.676ENSPPYG00000012666CPSF39983.676Pongo_abelii
ENSAOCG00000010077CPSF38465.913ENSPCAG00000015042CPSF38965.913Procavia_capensis
ENSAOCG00000010077CPSF38690.323ENSPCOG00000023016CPSF39790.323Propithecus_coquereli
ENSAOCG00000010077CPSF39888.071ENSPVAG00000005324CPSF39988.071Pteropus_vampyrus
ENSAOCG00000010077CPSF39988.808ENSPNYG00000004405cpsf39988.808Pundamilia_nyererei
ENSAOCG00000010077CPSF39098.732ENSPNYG00000021047CPSF39298.732Pundamilia_nyererei
ENSAOCG00000010077CPSF310090.000ENSPNAG00000023060cpsf310090.000Pygocentrus_nattereri
ENSAOCG00000010077CPSF39987.372ENSRNOG00000052418Cpsf39987.372Rattus_norvegicus
ENSAOCG00000010077CPSF39882.941ENSRBIG00000041615CPSF39983.901Rhinopithecus_bieti
ENSAOCG00000010077CPSF39887.941ENSRROG00000033792CPSF39987.941Rhinopithecus_roxellana
ENSAOCG00000010077CPSF38641.967YLR277CYSH18543.182Saccharomyces_cerevisiae
ENSAOCG00000010077CPSF39684.328ENSSBOG00000027263CPSF39784.328Saimiri_boliviensis_boliviensis
ENSAOCG00000010077CPSF39887.794ENSSHAG00000007024CPSF39987.794Sarcophilus_harrisii
ENSAOCG00000010077CPSF310091.014ENSSFOG00015002108cpsf310091.014Scleropages_formosus
ENSAOCG00000010077CPSF39594.377ENSSMAG00000020534CPSF39794.377Scophthalmus_maximus
ENSAOCG00000010077CPSF310098.116ENSSDUG00000018498CPSF310098.116Seriola_dumerili
ENSAOCG00000010077CPSF310088.261ENSSDUG00000002828cpsf39788.261Seriola_dumerili
ENSAOCG00000010077CPSF310088.406ENSSLDG00000008469cpsf39788.522Seriola_lalandi_dorsalis
ENSAOCG00000010077CPSF310098.116ENSSLDG00000005234CPSF310098.116Seriola_lalandi_dorsalis
ENSAOCG00000010077CPSF38984.181ENSSARG00000005186CPSF39084.181Sorex_araneus
ENSAOCG00000010077CPSF39685.821ENSSPUG00000015525CPSF39785.821Sphenodon_punctatus
ENSAOCG00000010077CPSF310088.116ENSSPAG00000018579cpsf310088.116Stegastes_partitus
ENSAOCG00000010077CPSF310098.841ENSSPAG00000002906CPSF310098.841Stegastes_partitus
ENSAOCG00000010077CPSF39888.235ENSSSCG00000020799CPSF39988.235Sus_scrofa
ENSAOCG00000010077CPSF39987.555ENSTGUG00000013016CPSF39987.555Taeniopygia_guttata
ENSAOCG00000010077CPSF36378.841ENSTRUG00000013905CPSF310079.310Takifugu_rubripes
ENSAOCG00000010077CPSF39987.645ENSTRUG00000007030cpsf39887.645Takifugu_rubripes
ENSAOCG00000010077CPSF38491.989ENSTBEG00000002707CPSF38491.989Tupaia_belangeri
ENSAOCG00000010077CPSF38674.939ENSTTRG00000000861CPSF38774.939Tursiops_truncatus
ENSAOCG00000010077CPSF39588.872ENSUAMG00000007535CPSF39488.872Ursus_americanus
ENSAOCG00000010077CPSF39985.079ENSUMAG00000003676CPSF39493.011Ursus_maritimus
ENSAOCG00000010077CPSF39288.013ENSVPAG00000008041CPSF310088.013Vicugna_pacos
ENSAOCG00000010077CPSF39888.235ENSVVUG00000002194CPSF39988.235Vulpes_vulpes
ENSAOCG00000010077CPSF39986.067ENSXETG00000008263cpsf39986.067Xenopus_tropicalis
ENSAOCG00000010077CPSF310086.957ENSXCOG00000019695cpsf310086.957Xiphophorus_couchianus
ENSAOCG00000010077CPSF35492.473ENSXCOG00000000957-8792.473Xiphophorus_couchianus
ENSAOCG00000010077CPSF310095.652ENSXMAG00000027291CPSF310095.652Xiphophorus_maculatus
ENSAOCG00000010077CPSF310086.812ENSXMAG00000009784cpsf310086.812Xiphophorus_maculatus

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