EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000010364 (Gene tree)
Gene ID: 111563693
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 12936 bases
Position: chrNXFZ01006270.1:379317-392252
Accession: 111563693
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000023868	Npa1	PF11707.8	1.2e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000004293	-	6147	XM_023262907	ENSAOCP00000023868	2048 (aa)	XP_023118675	-

Gene Model

Click here to download ENSAOCG00000010364's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000010364's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000010364	urb1	99	41.057	ENSG00000142207	URB1	99	40.670	Homo_sapiens
ENSAOCG00000010364	urb1	100	83.431	ENSAPOG00000020308	urb1	100	83.431	Acanthochromis_polyacanthus
ENSAOCG00000010364	urb1	99	41.358	ENSAMEG00000011998	URB1	99	41.358	Ailuropoda_melanoleuca
ENSAOCG00000010364	urb1	97	67.875	ENSACIG00000003248	urb1	99	67.922	Amphilophus_citrinellus
ENSAOCG00000010364	urb1	100	89.173	ENSAPEG00000010758	urb1	100	89.173	Amphiprion_percula
ENSAOCG00000010364	urb1	100	68.439	ENSATEG00000011790	urb1	100	68.439	Anabas_testudineus
ENSAOCG00000010364	urb1	96	55.568	ENSAPLG00000012791	URB1	97	55.568	Anas_platyrhynchos
ENSAOCG00000010364	urb1	99	41.396	ENSACAG00000002817	URB1	99	41.482	Anolis_carolinensis
ENSAOCG00000010364	urb1	99	41.535	ENSANAG00000024617	URB1	99	41.268	Aotus_nancymaae
ENSAOCG00000010364	urb1	99	77.186	ENSACLG00000024865	urb1	97	77.186	Astatotilapia_calliptera
ENSAOCG00000010364	urb1	99	49.096	ENSAMXG00000012306	urb1	97	48.694	Astyanax_mexicanus
ENSAOCG00000010364	urb1	98	40.194	ENSBTAG00000012412	URB1	99	40.150	Bos_taurus
ENSAOCG00000010364	urb1	99	40.929	ENSCJAG00000009118	URB1	99	40.625	Callithrix_jacchus
ENSAOCG00000010364	urb1	99	40.537	ENSCAFG00000008892	URB1	99	40.494	Canis_familiaris
ENSAOCG00000010364	urb1	99	40.749	ENSCAFG00020025987	-	99	40.705	Canis_lupus_dingo
ENSAOCG00000010364	urb1	99	39.835	ENSCAFG00020025994	-	99	39.791	Canis_lupus_dingo
ENSAOCG00000010364	urb1	99	40.331	ENSCHIG00000015645	URB1	99	40.200	Capra_hircus
ENSAOCG00000010364	urb1	100	40.747	ENSTSYG00000013286	URB1	99	40.617	Carlito_syrichta
ENSAOCG00000010364	urb1	98	40.455	ENSCAPG00000015589	URB1	99	40.366	Cavia_aperea
ENSAOCG00000010364	urb1	100	40.792	ENSCPOG00000006748	URB1	99	40.705	Cavia_porcellus
ENSAOCG00000010364	urb1	99	41.089	ENSCCAG00000021299	URB1	99	41.002	Cebus_capucinus
ENSAOCG00000010364	urb1	100	41.199	ENSCATG00000042630	URB1	99	41.113	Cercocebus_atys
ENSAOCG00000010364	urb1	100	41.225	ENSCLAG00000005262	URB1	99	41.486	Chinchilla_lanigera
ENSAOCG00000010364	urb1	100	40.371	ENSCSAG00000009584	URB1	99	40.285	Chlorocebus_sabaeus
ENSAOCG00000010364	urb1	99	43.631	ENSCPBG00000006454	URB1	99	43.761	Chrysemys_picta_bellii
ENSAOCG00000010364	urb1	100	41.243	ENSCANG00000031088	URB1	99	41.156	Colobus_angolensis_palliatus
ENSAOCG00000010364	urb1	99	40.502	ENSCGRG00001010616	Urb1	99	40.244	Cricetulus_griseus_chok1gshd
ENSAOCG00000010364	urb1	98	40.498	ENSCGRG00000015840	Urb1	99	40.409	Cricetulus_griseus_crigri
ENSAOCG00000010364	urb1	100	73.297	ENSCSEG00000012616	urb1	97	73.297	Cynoglossus_semilaevis
ENSAOCG00000010364	urb1	95	68.208	ENSCVAG00000009076	urb1	99	68.266	Cyprinodon_variegatus
ENSAOCG00000010364	urb1	99	49.801	ENSDARG00000060308	urb1	99	49.228	Danio_rerio
ENSAOCG00000010364	urb1	84	44.863	ENSDNOG00000015586	URB1	99	44.812	Dasypus_novemcinctus
ENSAOCG00000010364	urb1	99	41.051	ENSDORG00000006735	Urb1	99	41.008	Dipodomys_ordii
ENSAOCG00000010364	urb1	85	53.875	ENSETEG00000009080	URB1	85	53.875	Echinops_telfairi
ENSAOCG00000010364	urb1	99	41.106	ENSEASG00005007711	URB1	99	45.794	Equus_asinus_asinus
ENSAOCG00000010364	urb1	96	45.349	ENSECAG00000013206	URB1	99	45.480	Equus_caballus
ENSAOCG00000010364	urb1	99	59.267	ENSELUG00000020516	urb1	96	59.549	Esox_lucius
ENSAOCG00000010364	urb1	99	40.626	ENSFCAG00000002177	URB1	99	40.583	Felis_catus
ENSAOCG00000010364	urb1	96	42.127	ENSFALG00000004636	URB1	98	41.992	Ficedula_albicollis
ENSAOCG00000010364	urb1	100	40.644	ENSFDAG00000007288	URB1	95	40.513	Fukomys_damarensis
ENSAOCG00000010364	urb1	100	60.940	ENSFHEG00000000202	urb1	99	61.982	Fundulus_heteroclitus
ENSAOCG00000010364	urb1	93	55.882	ENSGMOG00000001838	urb1	94	56.417	Gadus_morhua
ENSAOCG00000010364	urb1	98	43.970	ENSGALG00000015887	URB1	98	43.970	Gallus_gallus
ENSAOCG00000010364	urb1	97	68.402	ENSGAFG00000020694	urb1	96	68.545	Gambusia_affinis
ENSAOCG00000010364	urb1	99	67.360	ENSGACG00000011703	urb1	99	67.272	Gasterosteus_aculeatus
ENSAOCG00000010364	urb1	99	43.769	ENSGAGG00000022544	URB1	99	43.769	Gopherus_agassizii
ENSAOCG00000010364	urb1	100	40.765	ENSGGOG00000000285	URB1	99	40.895	Gorilla_gorilla
ENSAOCG00000010364	urb1	100	70.026	ENSHBUG00000001904	urb1	100	69.982	Haplochromis_burtoni
ENSAOCG00000010364	urb1	99	40.146	ENSHGLG00000004907	URB1	99	39.974	Heterocephalus_glaber_female
ENSAOCG00000010364	urb1	99	40.539	ENSHGLG00100010749	URB1	99	40.365	Heterocephalus_glaber_male
ENSAOCG00000010364	urb1	78	67.742	ENSHCOG00000018683	urb1	98	67.622	Hippocampus_comes
ENSAOCG00000010364	urb1	99	45.587	ENSIPUG00000014721	urb1	99	44.969	Ictalurus_punctatus
ENSAOCG00000010364	urb1	99	41.373	ENSSTOG00000004539	URB1	99	40.957	Ictidomys_tridecemlineatus
ENSAOCG00000010364	urb1	95	73.987	ENSKMAG00000006001	urb1	99	73.987	Kryptolebias_marmoratus
ENSAOCG00000010364	urb1	97	71.346	ENSLBEG00000027208	urb1	99	71.346	Labrus_bergylta
ENSAOCG00000010364	urb1	99	40.927	ENSLACG00000017059	URB1	100	40.987	Latimeria_chalumnae
ENSAOCG00000010364	urb1	99	48.866	ENSLOCG00000009190	urb1	99	48.778	Lepisosteus_oculatus
ENSAOCG00000010364	urb1	99	41.388	ENSLAFG00000010407	URB1	99	41.388	Loxodonta_africana
ENSAOCG00000010364	urb1	100	40.834	ENSMFAG00000034391	URB1	97	40.747	Macaca_fascicularis
ENSAOCG00000010364	urb1	100	41.656	ENSMMUG00000010295	URB1	99	41.568	Macaca_mulatta
ENSAOCG00000010364	urb1	100	40.549	ENSMNEG00000032981	URB1	99	40.505	Macaca_nemestrina
ENSAOCG00000010364	urb1	100	41.373	ENSMLEG00000041435	URB1	99	41.286	Mandrillus_leucophaeus
ENSAOCG00000010364	urb1	99	68.631	ENSMAMG00000011238	urb1	99	68.631	Mastacembelus_armatus
ENSAOCG00000010364	urb1	100	65.328	ENSMZEG00005011862	urb1	100	65.283	Maylandia_zebra
ENSAOCG00000010364	urb1	96	43.831	ENSMGAG00000014512	URB1	98	43.831	Meleagris_gallopavo
ENSAOCG00000010364	urb1	91	51.584	ENSMAUG00000010516	Urb1	99	51.032	Mesocricetus_auratus
ENSAOCG00000010364	urb1	99	41.514	ENSMICG00000016424	URB1	99	41.340	Microcebus_murinus
ENSAOCG00000010364	urb1	99	40.402	ENSMOCG00000012613	Urb1	99	40.438	Microtus_ochrogaster
ENSAOCG00000010364	urb1	99	40.760	ENSMODG00000021076	URB1	99	40.760	Monodelphis_domestica
ENSAOCG00000010364	urb1	99	71.053	ENSMALG00000017411	urb1	99	71.053	Monopterus_albus
ENSAOCG00000010364	urb1	99	40.618	MGP_CAROLIEiJ_G0020948	Urb1	99	40.575	Mus_caroli
ENSAOCG00000010364	urb1	99	40.418	ENSMUSG00000039929	Urb1	99	40.375	Mus_musculus
ENSAOCG00000010364	urb1	99	40.549	MGP_PahariEiJ_G0016653	Urb1	99	40.505	Mus_pahari
ENSAOCG00000010364	urb1	99	40.539	MGP_SPRETEiJ_G0021854	Urb1	99	40.496	Mus_spretus
ENSAOCG00000010364	urb1	99	41.094	ENSMPUG00000001123	URB1	99	40.969	Mustela_putorius_furo
ENSAOCG00000010364	urb1	99	40.352	ENSNGAG00000001905	Urb1	99	40.352	Nannospalax_galili
ENSAOCG00000010364	urb1	85	70.069	ENSNBRG00000001049	urb1	99	69.722	Neolamprologus_brichardi
ENSAOCG00000010364	urb1	95	52.321	ENSNLEG00000026872	URB1	95	52.321	Nomascus_leucogenys
ENSAOCG00000010364	urb1	95	39.329	ENSMEUG00000010828	URB1	93	39.128	Notamacropus_eugenii
ENSAOCG00000010364	urb1	99	39.353	ENSOPRG00000013482	URB1	99	39.309	Ochotona_princeps
ENSAOCG00000010364	urb1	99	40.957	ENSODEG00000002587	URB1	99	40.913	Octodon_degus
ENSAOCG00000010364	urb1	100	70.596	ENSONIG00000005599	urb1	100	70.261	Oreochromis_niloticus
ENSAOCG00000010364	urb1	99	41.187	ENSOCUG00000009381	URB1	99	41.012	Oryctolagus_cuniculus
ENSAOCG00000010364	urb1	99	62.919	ENSORLG00000003429	urb1	99	62.919	Oryzias_latipes
ENSAOCG00000010364	urb1	99	63.685	ENSORLG00020013785	urb1	99	63.685	Oryzias_latipes_hni
ENSAOCG00000010364	urb1	95	71.217	ENSORLG00015019421	urb1	97	71.217	Oryzias_latipes_hsok
ENSAOCG00000010364	urb1	82	66.427	ENSOMEG00000002094	urb1	98	66.427	Oryzias_melastigma
ENSAOCG00000010364	urb1	100	40.969	ENSOGAG00000017140	URB1	99	40.925	Otolemur_garnettii
ENSAOCG00000010364	urb1	99	38.665	ENSOARG00000013679	URB1	98	46.550	Ovis_aries
ENSAOCG00000010364	urb1	100	40.678	ENSPPAG00000003423	URB1	99	40.808	Pan_paniscus
ENSAOCG00000010364	urb1	99	40.741	ENSPPRG00000023131	URB1	99	40.697	Panthera_pardus
ENSAOCG00000010364	urb1	86	43.313	ENSPTIG00000016125	URB1	92	43.262	Panthera_tigris_altaica
ENSAOCG00000010364	urb1	100	40.895	ENSPTRG00000013852	URB1	99	40.721	Pan_troglodytes
ENSAOCG00000010364	urb1	100	41.330	ENSPANG00000021964	URB1	99	41.243	Papio_anubis
ENSAOCG00000010364	urb1	99	49.606	ENSPKIG00000003683	urb1	99	49.846	Paramormyrops_kingsleyae
ENSAOCG00000010364	urb1	98	41.049	ENSPEMG00000021205	Urb1	98	41.013	Peromyscus_maniculatus_bairdii
ENSAOCG00000010364	urb1	65	38.260	ENSPMAG00000009733	URB1	82	37.772	Petromyzon_marinus
ENSAOCG00000010364	urb1	99	40.026	ENSPCIG00000016350	URB1	99	40.359	Phascolarctos_cinereus
ENSAOCG00000010364	urb1	97	64.289	ENSPLAG00000004371	urb1	100	66.034	Poecilia_latipinna
ENSAOCG00000010364	urb1	100	66.354	ENSPMEG00000006634	urb1	100	66.421	Poecilia_mexicana
ENSAOCG00000010364	urb1	100	63.924	ENSPREG00000013453	urb1	100	64.012	Poecilia_reticulata
ENSAOCG00000010364	urb1	99	41.197	ENSPPYG00000011359	URB1	99	40.548	Pongo_abelii
ENSAOCG00000010364	urb1	98	50.748	ENSPCAG00000007430	URB1	94	50.748	Procavia_capensis
ENSAOCG00000010364	urb1	99	41.095	ENSPCOG00000022695	URB1	99	40.921	Propithecus_coquereli
ENSAOCG00000010364	urb1	99	40.131	ENSPVAG00000000889	URB1	99	40.000	Pteropus_vampyrus
ENSAOCG00000010364	urb1	100	70.284	ENSPNYG00000010589	urb1	100	70.055	Pundamilia_nyererei
ENSAOCG00000010364	urb1	98	49.332	ENSPNAG00000019324	urb1	97	49.699	Pygocentrus_nattereri
ENSAOCG00000010364	urb1	99	40.000	ENSRNOG00000002080	Urb1	99	40.000	Rattus_norvegicus
ENSAOCG00000010364	urb1	100	40.721	ENSRBIG00000033122	URB1	99	40.678	Rhinopithecus_bieti
ENSAOCG00000010364	urb1	100	40.765	ENSRROG00000040237	URB1	99	40.721	Rhinopithecus_roxellana
ENSAOCG00000010364	urb1	99	41.469	ENSSBOG00000027672	URB1	99	41.202	Saimiri_boliviensis_boliviensis
ENSAOCG00000010364	urb1	99	41.018	ENSSHAG00000005140	URB1	100	40.923	Sarcophilus_harrisii
ENSAOCG00000010364	urb1	91	51.540	ENSSFOG00015000339	urb1	99	51.468	Scleropages_formosus
ENSAOCG00000010364	urb1	99	78.959	ENSSMAG00000003782	urb1	95	78.959	Scophthalmus_maximus
ENSAOCG00000010364	urb1	100	72.335	ENSSDUG00000012313	urb1	99	72.335	Seriola_dumerili
ENSAOCG00000010364	urb1	100	72.247	ENSSLDG00000023179	urb1	99	72.247	Seriola_lalandi_dorsalis
ENSAOCG00000010364	urb1	99	42.602	ENSSPUG00000012447	URB1	99	42.515	Sphenodon_punctatus
ENSAOCG00000010364	urb1	99	78.819	ENSSPAG00000006325	urb1	99	78.819	Stegastes_partitus
ENSAOCG00000010364	urb1	99	40.297	ENSSSCG00000032024	URB1	99	40.472	Sus_scrofa
ENSAOCG00000010364	urb1	72	44.970	ENSTGUG00000013442	URB1	100	44.970	Taeniopygia_guttata
ENSAOCG00000010364	urb1	100	62.511	ENSTRUG00000009372	urb1	100	62.511	Takifugu_rubripes
ENSAOCG00000010364	urb1	99	60.222	ENSTNIG00000016277	urb1	99	60.222	Tetraodon_nigroviridis
ENSAOCG00000010364	urb1	68	48.563	ENSTBEG00000010044	URB1	62	48.563	Tupaia_belangeri
ENSAOCG00000010364	urb1	89	50.501	ENSTTRG00000007712	URB1	90	49.728	Tursiops_truncatus
ENSAOCG00000010364	urb1	99	40.755	ENSUAMG00000012231	URB1	99	40.755	Ursus_americanus
ENSAOCG00000010364	urb1	88	43.155	ENSUMAG00000017419	URB1	97	43.773	Ursus_maritimus
ENSAOCG00000010364	urb1	67	62.400	ENSVPAG00000001164	URB1	63	62.400	Vicugna_pacos
ENSAOCG00000010364	urb1	98	53.881	ENSVVUG00000000551	URB1	95	53.881	Vulpes_vulpes
ENSAOCG00000010364	urb1	99	42.550	ENSXETG00000009895	urb1	99	42.260	Xenopus_tropicalis
ENSAOCG00000010364	urb1	100	65.667	ENSXCOG00000005500	urb1	100	65.759	Xiphophorus_couchianus
ENSAOCG00000010364	urb1	100	65.639	ENSXMAG00000007253	urb1	100	65.731	Xiphophorus_maculatus