EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000010433 (Gene tree)
Gene ID: 111563697
Gene Symbol: scaf4b
Alias: im:6900467|si:ch211-245g11.2
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 24675 bases
Position: chrNXFZ01006270.1:352441-377115
Accession: 111563697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000023952	RRM_1	PF00076.22	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000004040	-	3070	XM_023262912	ENSAOCP00000023952	754 (aa)	XP_023118680	UPI000C311AE1

Gene Model

Click here to download ENSAOCG00000010433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000010433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000010433	scaf4b	54	76.923	ENSAOCG00000000615	scaf4a	63	58.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000010433	scaf4b	100	93.783	ENSAPOG00000019615	scaf4b	100	94.312	Acanthochromis_polyacanthus
ENSAOCG00000010433	scaf4b	61	66.818	ENSAPOG00000002946	scaf4a	63	59.567	Acanthochromis_polyacanthus
ENSAOCG00000010433	scaf4b	100	99.469	ENSAPEG00000010913	scaf4b	100	99.469	Amphiprion_percula
ENSAOCG00000010433	scaf4b	98	77.674	ENSATEG00000011758	scaf4b	100	77.406	Anabas_testudineus
ENSAOCG00000010433	scaf4b	62	62.319	ENSACAG00000002569	SCAF4	62	57.194	Anolis_carolinensis
ENSAOCG00000010433	scaf4b	100	80.291	ENSACLG00000024833	scaf4b	100	78.968	Astatotilapia_calliptera
ENSAOCG00000010433	scaf4b	55	73.418	ENSCJAG00000008993	SCAF4	57	64.734	Callithrix_jacchus
ENSAOCG00000010433	scaf4b	53	74.051	ENSCAFG00020026019	SCAF4	77	52.126	Canis_lupus_dingo
ENSAOCG00000010433	scaf4b	53	73.418	ENSTSYG00000011344	SCAF4	52	64.734	Carlito_syrichta
ENSAOCG00000010433	scaf4b	71	53.601	ENSCSEG00000019549	scaf4a	60	55.172	Cynoglossus_semilaevis
ENSAOCG00000010433	scaf4b	100	64.482	ENSCSEG00000012808	-	99	64.220	Cynoglossus_semilaevis
ENSAOCG00000010433	scaf4b	100	72.032	ENSCVAG00000009142	scaf4b	100	72.032	Cyprinodon_variegatus
ENSAOCG00000010433	scaf4b	99	47.514	ENSDARG00000077093	scaf4a	79	46.597	Danio_rerio
ENSAOCG00000010433	scaf4b	55	65.839	ENSDARG00000018854	scaf4b	68	57.193	Danio_rerio
ENSAOCG00000010433	scaf4b	61	52.482	ENSEBUG00000003891	SCAF8	53	51.923	Eptatretus_burgeri
ENSAOCG00000010433	scaf4b	62	51.471	ENSELUG00000002779	SCAF8	78	48.163	Esox_lucius
ENSAOCG00000010433	scaf4b	100	74.538	ENSFHEG00000007634	scaf4b	100	74.538	Fundulus_heteroclitus
ENSAOCG00000010433	scaf4b	56	68.263	ENSGMOG00000015188	scaf4a	55	61.240	Gadus_morhua
ENSAOCG00000010433	scaf4b	52	72.857	ENSGACG00000020580	scaf4a	50	59.470	Gasterosteus_aculeatus
ENSAOCG00000010433	scaf4b	58	61.386	ENSHBUG00000007920	scaf4a	59	50.145	Haplochromis_burtoni
ENSAOCG00000010433	scaf4b	55	75.316	ENSJJAG00000019447	Scaf4	58	65.044	Jaculus_jaculus
ENSAOCG00000010433	scaf4b	100	76.913	ENSKMAG00000005742	scaf4b	100	76.913	Kryptolebias_marmoratus
ENSAOCG00000010433	scaf4b	76	55.510	ENSLBEG00000014675	scaf4a	56	54.365	Labrus_bergylta
ENSAOCG00000010433	scaf4b	84	56.508	ENSLOCG00000009162	scaf4a	85	47.603	Lepisosteus_oculatus
ENSAOCG00000010433	scaf4b	79	54.380	ENSMALG00000013825	scaf4a	68	58.303	Monopterus_albus
ENSAOCG00000010433	scaf4b	71	66.772	ENSONIG00000005610	scaf4b	87	75.945	Oreochromis_niloticus
ENSAOCG00000010433	scaf4b	100	69.272	ENSORLG00000003420	scaf4b	100	70.106	Oryzias_latipes
ENSAOCG00000010433	scaf4b	100	69.312	ENSORLG00020013853	scaf4b	100	70.145	Oryzias_latipes_hni
ENSAOCG00000010433	scaf4b	59	64.824	ENSPKIG00000022408	scaf4a	99	49.231	Paramormyrops_kingsleyae
ENSAOCG00000010433	scaf4b	52	58.993	ENSPMAG00000006192	SCAF8	59	58.904	Petromyzon_marinus
ENSAOCG00000010433	scaf4b	98	55.748	ENSPFOG00000003261	scaf4b	78	71.852	Poecilia_formosa
ENSAOCG00000010433	scaf4b	79	54.225	ENSPFOG00000017156	scaf4a	67	57.746	Poecilia_formosa
ENSAOCG00000010433	scaf4b	100	69.873	ENSPLAG00000004403	-	100	69.873	Poecilia_latipinna
ENSAOCG00000010433	scaf4b	100	70.000	ENSPMEG00000006666	-	100	70.000	Poecilia_mexicana
ENSAOCG00000010433	scaf4b	100	69.659	ENSPREG00000013510	scaf4b	100	69.659	Poecilia_reticulata
ENSAOCG00000010433	scaf4b	55	73.418	ENSPCOG00000018710	SCAF4	58	60.076	Propithecus_coquereli
ENSAOCG00000010433	scaf4b	100	80.159	ENSPNYG00000010526	scaf4b	100	78.836	Pundamilia_nyererei
ENSAOCG00000010433	scaf4b	98	75.887	ENSPNAG00000015199	-	56	75.887	Pygocentrus_nattereri
ENSAOCG00000010433	scaf4b	62	44.318	ENSSFOG00015006338	scaf4a	80	45.775	Scleropages_formosus
ENSAOCG00000010433	scaf4b	100	79.423	ENSSMAG00000003738	scaf4b	100	78.899	Scophthalmus_maximus
ENSAOCG00000010433	scaf4b	100	83.596	ENSSDUG00000012380	scaf4b	100	83.333	Seriola_dumerili
ENSAOCG00000010433	scaf4b	100	83.465	ENSSLDG00000023152	-	100	83.202	Seriola_lalandi_dorsalis
ENSAOCG00000010433	scaf4b	100	63.046	ENSTRUG00000009536	-	100	62.384	Takifugu_rubripes
ENSAOCG00000010433	scaf4b	60	60.825	ENSTNIG00000016885	SCAF8	56	48.684	Tetraodon_nigroviridis