EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000010562 (Gene tree)
Gene ID: 111580563
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 6759 bases
Position: chrNXFZ01003600.1:80983-87741
Accession: 111580563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000024035	zf-U11-48K	PF05253.12	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000003816	-	1951	XM_023288368	ENSAOCP00000024035	338 (aa)	XP_023144136	UPI000C315A14

Gene Model

Click here to download ENSAOCG00000010562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000010562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000010562	snrnp48	96	42.407	ENSG00000168566	SNRNP48	81	47.350	Homo_sapiens
ENSAOCG00000010562	snrnp48	100	96.154	ENSAPOG00000021430	snrnp48	100	96.154	Acanthochromis_polyacanthus
ENSAOCG00000010562	snrnp48	96	44.638	ENSAMEG00000017349	SNRNP48	82	47.887	Ailuropoda_melanoleuca
ENSAOCG00000010562	snrnp48	96	75.077	ENSACIG00000002032	snrnp48	96	74.924	Amphilophus_citrinellus
ENSAOCG00000010562	snrnp48	100	98.521	ENSAPEG00000003231	snrnp48	100	98.521	Amphiprion_percula
ENSAOCG00000010562	snrnp48	93	80.503	ENSATEG00000020210	snrnp48	95	81.132	Anabas_testudineus
ENSAOCG00000010562	snrnp48	81	49.141	ENSACAG00000002811	SNRNP48	73	52.340	Anolis_carolinensis
ENSAOCG00000010562	snrnp48	96	42.651	ENSANAG00000033538	SNRNP48	81	47.703	Aotus_nancymaae
ENSAOCG00000010562	snrnp48	94	58.438	ENSAMXG00000015309	snrnp48	97	58.333	Astyanax_mexicanus
ENSAOCG00000010562	snrnp48	91	42.433	ENSBTAG00000001123	SNRNP48	77	47.253	Bos_taurus
ENSAOCG00000010562	snrnp48	96	42.651	ENSCJAG00000021330	SNRNP48	81	47.703	Callithrix_jacchus
ENSAOCG00000010562	snrnp48	96	44.380	ENSCAFG00000009574	SNRNP48	67	47.350	Canis_familiaris
ENSAOCG00000010562	snrnp48	96	43.804	ENSCAFG00020013203	SNRNP48	81	47.350	Canis_lupus_dingo
ENSAOCG00000010562	snrnp48	96	43.020	ENSCHIG00000015216	SNRNP48	81	46.853	Capra_hircus
ENSAOCG00000010562	snrnp48	80	48.375	ENSTSYG00000000698	SNRNP48	77	48.708	Carlito_syrichta
ENSAOCG00000010562	snrnp48	86	43.260	ENSCAPG00000006768	SNRNP48	72	51.092	Cavia_aperea
ENSAOCG00000010562	snrnp48	96	43.429	ENSCPOG00000007910	SNRNP48	81	47.350	Cavia_porcellus
ENSAOCG00000010562	snrnp48	96	42.075	ENSCCAG00000035652	SNRNP48	81	46.996	Cebus_capucinus
ENSAOCG00000010562	snrnp48	96	43.840	ENSCATG00000033947	SNRNP48	81	47.350	Cercocebus_atys
ENSAOCG00000010562	snrnp48	92	43.284	ENSCLAG00000003765	SNRNP48	81	47.350	Chinchilla_lanigera
ENSAOCG00000010562	snrnp48	96	42.693	ENSCSAG00000007409	SNRNP48	81	47.703	Chlorocebus_sabaeus
ENSAOCG00000010562	snrnp48	82	47.712	ENSCPBG00000019146	SNRNP48	75	51.867	Chrysemys_picta_bellii
ENSAOCG00000010562	snrnp48	96	42.693	ENSCANG00000030017	SNRNP48	81	47.703	Colobus_angolensis_palliatus
ENSAOCG00000010562	snrnp48	86	39.404	ENSCGRG00001008805	-	79	41.569	Cricetulus_griseus_chok1gshd
ENSAOCG00000010562	snrnp48	96	43.516	ENSCGRG00001001076	-	82	47.183	Cricetulus_griseus_chok1gshd
ENSAOCG00000010562	snrnp48	96	43.516	ENSCGRG00000007781	Snrnp48	82	47.183	Cricetulus_griseus_crigri
ENSAOCG00000010562	snrnp48	78	73.384	ENSCSEG00000000722	snrnp48	89	68.868	Cynoglossus_semilaevis
ENSAOCG00000010562	snrnp48	99	70.710	ENSCVAG00000019829	snrnp48	84	72.036	Cyprinodon_variegatus
ENSAOCG00000010562	snrnp48	95	51.807	ENSDARG00000039989	snrnp48	83	55.477	Danio_rerio
ENSAOCG00000010562	snrnp48	97	42.776	ENSDNOG00000014978	SNRNP48	82	47.405	Dasypus_novemcinctus
ENSAOCG00000010562	snrnp48	96	43.103	ENSDORG00000015140	Snrnp48	81	46.831	Dipodomys_ordii
ENSAOCG00000010562	snrnp48	83	47.241	ENSEASG00005012021	SNRNP48	81	47.535	Equus_asinus_asinus
ENSAOCG00000010562	snrnp48	96	42.816	ENSECAG00000026937	SNRNP48	81	47.887	Equus_caballus
ENSAOCG00000010562	snrnp48	96	30.523	ENSEEUG00000015437	SNRNP48	81	31.408	Erinaceus_europaeus
ENSAOCG00000010562	snrnp48	85	64.360	ENSELUG00000009766	snrnp48	79	63.860	Esox_lucius
ENSAOCG00000010562	snrnp48	83	47.260	ENSFCAG00000018853	SNRNP48	81	47.552	Felis_catus
ENSAOCG00000010562	snrnp48	80	49.320	ENSFALG00000007797	SNRNP48	73	56.466	Ficedula_albicollis
ENSAOCG00000010562	snrnp48	96	43.314	ENSFDAG00000009231	SNRNP48	81	47.350	Fukomys_damarensis
ENSAOCG00000010562	snrnp48	65	80.717	ENSFHEG00000014647	snrnp48	95	78.755	Fundulus_heteroclitus
ENSAOCG00000010562	snrnp48	89	62.579	ENSGMOG00000018599	-	84	68.773	Gadus_morhua
ENSAOCG00000010562	snrnp48	76	52.471	ENSGALG00000013005	SNRNP48	77	55.745	Gallus_gallus
ENSAOCG00000010562	snrnp48	95	73.926	ENSGAFG00000021639	snrnp48	95	74.233	Gambusia_affinis
ENSAOCG00000010562	snrnp48	72	79.268	ENSGACG00000017756	-	96	73.457	Gasterosteus_aculeatus
ENSAOCG00000010562	snrnp48	82	46.732	ENSGAGG00000000865	SNRNP48	78	50.622	Gopherus_agassizii
ENSAOCG00000010562	snrnp48	96	42.651	ENSGGOG00000013220	SNRNP48	81	47.703	Gorilla_gorilla
ENSAOCG00000010562	snrnp48	93	80.380	ENSHBUG00000017066	snrnp48	94	80.435	Haplochromis_burtoni
ENSAOCG00000010562	snrnp48	96	42.075	ENSHGLG00000015241	SNRNP48	81	46.996	Heterocephalus_glaber_female
ENSAOCG00000010562	snrnp48	96	42.075	ENSHGLG00100010027	SNRNP48	81	46.996	Heterocephalus_glaber_male
ENSAOCG00000010562	snrnp48	75	75.099	ENSHCOG00000014066	snrnp48	94	70.336	Hippocampus_comes
ENSAOCG00000010562	snrnp48	96	42.693	ENSSTOG00000014635	SNRNP48	81	47.703	Ictidomys_tridecemlineatus
ENSAOCG00000010562	snrnp48	79	48.551	ENSJJAG00000011495	Snrnp48	81	47.518	Jaculus_jaculus
ENSAOCG00000010562	snrnp48	95	75.851	ENSKMAG00000016514	snrnp48	95	77.090	Kryptolebias_marmoratus
ENSAOCG00000010562	snrnp48	82	77.617	ENSLBEG00000026249	snrnp48	95	77.640	Labrus_bergylta
ENSAOCG00000010562	snrnp48	91	48.204	ENSLACG00000003958	SNRNP48	83	50.871	Latimeria_chalumnae
ENSAOCG00000010562	snrnp48	83	59.929	ENSLOCG00000004187	snrnp48	94	55.901	Lepisosteus_oculatus
ENSAOCG00000010562	snrnp48	80	47.482	ENSLAFG00000011152	SNRNP48	77	47.794	Loxodonta_africana
ENSAOCG00000010562	snrnp48	96	42.651	ENSMFAG00000045216	SNRNP48	81	47.703	Macaca_fascicularis
ENSAOCG00000010562	snrnp48	96	42.651	ENSMMUG00000014785	SNRNP48	81	47.703	Macaca_mulatta
ENSAOCG00000010562	snrnp48	96	42.651	ENSMNEG00000042269	SNRNP48	81	47.703	Macaca_nemestrina
ENSAOCG00000010562	snrnp48	96	42.651	ENSMLEG00000034004	SNRNP48	81	47.703	Mandrillus_leucophaeus
ENSAOCG00000010562	snrnp48	95	77.329	ENSMAMG00000018673	snrnp48	83	77.329	Mastacembelus_armatus
ENSAOCG00000010562	snrnp48	81	49.834	ENSMGAG00000006037	SNRNP48	79	55.745	Meleagris_gallopavo
ENSAOCG00000010562	snrnp48	96	44.092	ENSMAUG00000011944	Snrnp48	82	47.887	Mesocricetus_auratus
ENSAOCG00000010562	snrnp48	96	42.816	ENSMICG00000012497	SNRNP48	81	47.535	Microcebus_murinus
ENSAOCG00000010562	snrnp48	96	43.391	ENSMOCG00000015555	Snrnp48	82	47.368	Microtus_ochrogaster
ENSAOCG00000010562	snrnp48	56	85.789	ENSMMOG00000003072	-	60	85.789	Mola_mola
ENSAOCG00000010562	snrnp48	84	46.801	ENSMODG00000009996	SNRNP48	78	47.079	Monodelphis_domestica
ENSAOCG00000010562	snrnp48	95	78.261	ENSMALG00000005725	snrnp48	95	78.261	Monopterus_albus
ENSAOCG00000010562	snrnp48	96	43.804	MGP_CAROLIEiJ_G0018441	Snrnp48	82	47.535	Mus_caroli
ENSAOCG00000010562	snrnp48	96	43.804	ENSMUSG00000021431	Snrnp48	82	47.535	Mus_musculus
ENSAOCG00000010562	snrnp48	96	43.804	MGP_PahariEiJ_G0019509	Snrnp48	82	47.535	Mus_pahari
ENSAOCG00000010562	snrnp48	96	43.804	MGP_SPRETEiJ_G0019321	Snrnp48	82	47.535	Mus_spretus
ENSAOCG00000010562	snrnp48	96	44.828	ENSNGAG00000004849	Snrnp48	81	48.592	Nannospalax_galili
ENSAOCG00000010562	snrnp48	93	80.696	ENSNBRG00000012127	snrnp48	94	80.745	Neolamprologus_brichardi
ENSAOCG00000010562	snrnp48	96	42.693	ENSNLEG00000011667	SNRNP48	81	47.703	Nomascus_leucogenys
ENSAOCG00000010562	snrnp48	83	44.948	ENSOPRG00000015471	SNRNP48	86	45.583	Ochotona_princeps
ENSAOCG00000010562	snrnp48	93	81.646	ENSONIG00000001520	snrnp48	94	81.677	Oreochromis_niloticus
ENSAOCG00000010562	snrnp48	53	37.313	ENSOANG00000019888	-	96	38.308	Ornithorhynchus_anatinus
ENSAOCG00000010562	snrnp48	79	47.080	ENSOCUG00000005168	SNRNP48	90	47.350	Oryctolagus_cuniculus
ENSAOCG00000010562	snrnp48	88	79.866	ENSORLG00000015654	snrnp48	94	79.938	Oryzias_latipes
ENSAOCG00000010562	snrnp48	88	77.517	ENSORLG00020015976	snrnp48	80	79.321	Oryzias_latipes_hni
ENSAOCG00000010562	snrnp48	88	77.852	ENSORLG00015022379	snrnp48	81	79.630	Oryzias_latipes_hsok
ENSAOCG00000010562	snrnp48	93	79.874	ENSOMEG00000022007	snrnp48	94	79.630	Oryzias_melastigma
ENSAOCG00000010562	snrnp48	82	46.713	ENSOGAG00000005275	SNRNP48	82	46.975	Otolemur_garnettii
ENSAOCG00000010562	snrnp48	81	45.424	ENSOARG00000017319	SNRNP48	72	51.675	Ovis_aries
ENSAOCG00000010562	snrnp48	96	42.693	ENSPPAG00000032873	SNRNP48	81	47.703	Pan_paniscus
ENSAOCG00000010562	snrnp48	83	46.918	ENSPPRG00000004283	SNRNP48	81	47.203	Panthera_pardus
ENSAOCG00000010562	snrnp48	69	50.420	ENSPTIG00000013502	SNRNP48	77	50.862	Panthera_tigris_altaica
ENSAOCG00000010562	snrnp48	96	42.693	ENSPTRG00000017703	SNRNP48	81	47.703	Pan_troglodytes
ENSAOCG00000010562	snrnp48	96	42.651	ENSPANG00000000771	SNRNP48	81	47.703	Papio_anubis
ENSAOCG00000010562	snrnp48	83	60.976	ENSPKIG00000013703	snrnp48	60	61.566	Paramormyrops_kingsleyae
ENSAOCG00000010562	snrnp48	80	46.689	ENSPSIG00000002213	SNRNP48	74	51.477	Pelodiscus_sinensis
ENSAOCG00000010562	snrnp48	76	66.794	ENSPMGG00000008120	snrnp48	93	66.794	Periophthalmus_magnuspinnatus
ENSAOCG00000010562	snrnp48	96	44.669	ENSPEMG00000008872	Snrnp48	82	48.944	Peromyscus_maniculatus_bairdii
ENSAOCG00000010562	snrnp48	95	74.540	ENSPFOG00000003578	snrnp48	95	73.926	Poecilia_formosa
ENSAOCG00000010562	snrnp48	70	78.390	ENSPLAG00000002290	snrnp48	82	78.390	Poecilia_latipinna
ENSAOCG00000010562	snrnp48	95	74.540	ENSPMEG00000018033	snrnp48	95	73.926	Poecilia_mexicana
ENSAOCG00000010562	snrnp48	95	75.153	ENSPREG00000018541	snrnp48	95	74.847	Poecilia_reticulata
ENSAOCG00000010562	snrnp48	96	42.075	ENSPPYG00000016209	SNRNP48	81	46.996	Pongo_abelii
ENSAOCG00000010562	snrnp48	71	36.508	ENSPCAG00000011991	SNRNP48	93	37.849	Procavia_capensis
ENSAOCG00000010562	snrnp48	83	46.181	ENSPVAG00000002854	SNRNP48	81	46.454	Pteropus_vampyrus
ENSAOCG00000010562	snrnp48	92	81.029	ENSPNYG00000015399	snrnp48	91	82.270	Pundamilia_nyererei
ENSAOCG00000010562	snrnp48	96	43.875	ENSRNOG00000013756	Snrnp48	82	48.592	Rattus_norvegicus
ENSAOCG00000010562	snrnp48	83	47.405	ENSRBIG00000043856	SNRNP48	87	47.703	Rhinopithecus_bieti
ENSAOCG00000010562	snrnp48	96	42.651	ENSRROG00000043229	SNRNP48	81	47.703	Rhinopithecus_roxellana
ENSAOCG00000010562	snrnp48	96	42.939	ENSSBOG00000019486	SNRNP48	81	48.057	Saimiri_boliviensis_boliviensis
ENSAOCG00000010562	snrnp48	80	48.252	ENSSHAG00000014483	SNRNP48	80	48.571	Sarcophilus_harrisii
ENSAOCG00000010562	snrnp48	73	62.451	ENSSFOG00015006610	snrnp48	68	60.554	Scleropages_formosus
ENSAOCG00000010562	snrnp48	95	82.555	ENSSDUG00000014953	snrnp48	95	82.555	Seriola_dumerili
ENSAOCG00000010562	snrnp48	95	82.555	ENSSLDG00000005989	snrnp48	95	82.555	Seriola_lalandi_dorsalis
ENSAOCG00000010562	snrnp48	83	48.505	ENSSPUG00000006257	SNRNP48	61	53.812	Sphenodon_punctatus
ENSAOCG00000010562	snrnp48	95	91.900	ENSSPAG00000006454	snrnp48	95	91.900	Stegastes_partitus
ENSAOCG00000010562	snrnp48	83	49.026	ENSTGUG00000007575	SNRNP48	76	54.583	Taeniopygia_guttata
ENSAOCG00000010562	snrnp48	75	76.078	ENSTRUG00000007031	snrnp48	94	71.385	Takifugu_rubripes
ENSAOCG00000010562	snrnp48	99	65.579	ENSTNIG00000012977	-	92	67.081	Tetraodon_nigroviridis
ENSAOCG00000010562	snrnp48	75	48.106	ENSTBEG00000015620	SNRNP48	77	47.909	Tupaia_belangeri
ENSAOCG00000010562	snrnp48	91	43.881	ENSTTRG00000016715	SNRNP48	81	47.535	Tursiops_truncatus
ENSAOCG00000010562	snrnp48	96	44.509	ENSUAMG00000003690	SNRNP48	81	48.582	Ursus_americanus
ENSAOCG00000010562	snrnp48	69	50.000	ENSVPAG00000003557	SNRNP48	77	50.435	Vicugna_pacos
ENSAOCG00000010562	snrnp48	96	43.804	ENSVVUG00000004996	SNRNP48	81	47.350	Vulpes_vulpes
ENSAOCG00000010562	snrnp48	83	47.735	ENSXETG00000020447	snrnp48	76	49.416	Xenopus_tropicalis
ENSAOCG00000010562	snrnp48	95	65.644	ENSXCOG00000004478	snrnp48	95	67.178	Xiphophorus_couchianus
ENSAOCG00000010562	snrnp48	95	73.620	ENSXMAG00000013595	snrnp48	95	73.006	Xiphophorus_maculatus