EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000010567 (Gene tree)
Gene ID: 111576495
Gene Symbol: -
Alias: -
Full Name: transcription factor che-1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 8130 bases
Position: chrNXFZ01003153.1:426210-434339
Accession: 111576495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000006883	zf-C2H2	PF00096.26	4.1e-22	1	3
ENSAOCP00000006883	zf-C2H2	PF00096.26	4.1e-22	2	3
ENSAOCP00000006883	zf-C2H2	PF00096.26	4.1e-22	3	3
ENSAOCP00000006883	zf-met	PF12874.7	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000003803	-	2534	XM_023282197	ENSAOCP00000006883	428 (aa)	XP_023137965	UPI000C30741D

Gene Model

Click here to download ENSAOCG00000010567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000010567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000010567	-	53	43.617	ENSAOCG00000013656	-	68	43.617
ENSAOCG00000010567	-	55	50.442	ENSAOCG00000015369	-	99	51.961
ENSAOCG00000010567	-	97	44.037	ENSAOCG00000019475	-	92	44.037
ENSAOCG00000010567	-	57	43.363	ENSAOCG00000016737	-	96	43.363
ENSAOCG00000010567	-	50	43.137	ENSAOCG00000013578	-	89	46.903
ENSAOCG00000010567	-	51	49.524	ENSAOCG00000012829	-	69	49.524
ENSAOCG00000010567	-	57	44.792	ENSAOCG00000001615	-	89	44.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000010567	-	100	94.159	ENSAPOG00000008360	-	100	94.159	Acanthochromis_polyacanthus
ENSAOCG00000010567	-	100	100.000	ENSAPEG00000012300	-	100	100.000	Amphiprion_percula
ENSAOCG00000010567	-	99	63.953	ENSCVAG00000021152	-	99	63.953	Cyprinodon_variegatus
ENSAOCG00000010567	-	97	46.018	ENSELUG00000004677	-	99	46.018	Esox_lucius
ENSAOCG00000010567	-	100	63.279	ENSFHEG00000014608	-	100	63.279	Fundulus_heteroclitus
ENSAOCG00000010567	-	56	55.556	ENSHCOG00000013256	-	88	55.556	Hippocampus_comes
ENSAOCG00000010567	-	100	71.462	ENSKMAG00000012097	-	100	71.462	Kryptolebias_marmoratus
ENSAOCG00000010567	-	67	38.043	ENSLBEG00000009663	-	88	38.043	Labrus_bergylta
ENSAOCG00000010567	-	96	52.239	ENSOMEG00000019811	-	95	52.239	Oryzias_melastigma
ENSAOCG00000010567	-	98	45.133	ENSPNAG00000025882	-	99	45.133	Pygocentrus_nattereri
ENSAOCG00000010567	-	58	50.685	ENSSMAG00000013663	-	92	47.561	Scophthalmus_maximus
ENSAOCG00000010567	-	60	52.703	ENSSPAG00000008950	-	69	52.703	Stegastes_partitus
ENSAOCG00000010567	-	100	89.977	ENSSPAG00000018010	-	100	89.977	Stegastes_partitus