EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000010786 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 3-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 136937 bases
Position: chrNXFZ01001917.1:518017-654953
Accession: 111565003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000024137	Fox-1_C	PF12414.8	2.8e-29	1	1
ENSAOCP00000006981	Fox-1_C	PF12414.8	2.8e-29	1	1
ENSAOCP00000024143	Fox-1_C	PF12414.8	1.2e-27	1	1
ENSAOCP00000024143	RRM_1	PF00076.22	1.1e-18	1	1
ENSAOCP00000006981	RRM_1	PF00076.22	1.2e-18	1	1
ENSAOCP00000024137	RRM_1	PF00076.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000003571	-	1092	XM_023264926	ENSAOCP00000024143	363 (aa)	XP_023120694	-
ENSAOCT00000003630	-	1155	-	ENSAOCP00000024137	384 (aa)	-	-
ENSAOCT00000003638	-	1149	-	ENSAOCP00000006981	382 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000010786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000010786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000010786	-	74	64.211	ENSAOCG00000008283	rbfox1	97	64.561
ENSAOCG00000010786	-	97	80.654	ENSAOCG00000012358	rbfox3b	100	79.837
ENSAOCG00000010786	-	57	72.350	ENSAOCG00000020938	rbfox1l	96	55.519
ENSAOCG00000010786	-	63	59.398	ENSAOCG00000013752	rbfox2	71	54.407
ENSAOCG00000010786	-	72	54.459	ENSAOCG00000015358	-	73	59.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000010786	-	71	93.103	ENSG00000167281	RBFOX3	95	76.412	Homo_sapiens
ENSAOCG00000010786	-	100	85.124	ENSAPOG00000015658	-	94	83.791	Acanthochromis_polyacanthus
ENSAOCG00000010786	-	98	80.541	ENSAPOG00000021630	rbfox3b	100	79.837	Acanthochromis_polyacanthus
ENSAOCG00000010786	-	88	71.751	ENSAMEG00000014170	RBFOX3	92	71.154	Ailuropoda_melanoleuca
ENSAOCG00000010786	-	83	84.818	ENSACIG00000010817	rbfox3b	95	83.681	Amphilophus_citrinellus
ENSAOCG00000010786	-	82	81.366	ENSACIG00000003768	-	90	81.366	Amphilophus_citrinellus
ENSAOCG00000010786	-	89	91.040	ENSAPEG00000015891	-	89	91.040	Amphiprion_percula
ENSAOCG00000010786	-	98	78.933	ENSAPEG00000019081	rbfox3b	100	78.371	Amphiprion_percula
ENSAOCG00000010786	-	85	82.154	ENSATEG00000023101	-	99	82.154	Anabas_testudineus
ENSAOCG00000010786	-	83	73.775	ENSATEG00000019945	rbfox3b	97	72.537	Anabas_testudineus
ENSAOCG00000010786	-	95	77.008	ENSACAG00000016093	RBFOX3	100	76.454	Anolis_carolinensis
ENSAOCG00000010786	-	73	93.333	ENSANAG00000023457	RBFOX3	95	75.748	Aotus_nancymaae
ENSAOCG00000010786	-	97	89.101	ENSACLG00000025552	-	100	89.101	Astatotilapia_calliptera
ENSAOCG00000010786	-	98	80.000	ENSACLG00000020011	rbfox3b	97	79.459	Astatotilapia_calliptera
ENSAOCG00000010786	-	98	82.667	ENSAMXG00000037246	rbfox3a	100	82.527	Astyanax_mexicanus
ENSAOCG00000010786	-	94	76.124	ENSAMXG00000042841	rbfox3b	100	75.281	Astyanax_mexicanus
ENSAOCG00000010786	-	65	81.028	ENSBTAG00000006280	RBFOX3	70	89.583	Bos_taurus
ENSAOCG00000010786	-	73	93.103	ENSCJAG00000009563	RBFOX3	79	89.583	Callithrix_jacchus
ENSAOCG00000010786	-	65	81.275	ENSCAFG00000005547	RBFOX3	98	75.812	Canis_familiaris
ENSAOCG00000010786	-	71	93.333	ENSCAFG00020008126	RBFOX3	77	86.538	Canis_lupus_dingo
ENSAOCG00000010786	-	73	93.333	ENSCHIG00000009124	RBFOX3	77	86.538	Capra_hircus
ENSAOCG00000010786	-	73	93.103	ENSTSYG00000029617	RBFOX3	79	91.667	Carlito_syrichta
ENSAOCG00000010786	-	80	65.254	ENSCPOG00000021703	RBFOX3	80	82.000	Cavia_porcellus
ENSAOCG00000010786	-	73	93.103	ENSCCAG00000028450	RBFOX3	95	75.748	Cebus_capucinus
ENSAOCG00000010786	-	79	80.903	ENSCATG00000018349	RBFOX3	95	76.412	Cercocebus_atys
ENSAOCG00000010786	-	80	65.909	ENSCLAG00000006449	RBFOX3	79	89.583	Chinchilla_lanigera
ENSAOCG00000010786	-	79	75.333	ENSCSAG00000002355	RBFOX3	95	76.412	Chlorocebus_sabaeus
ENSAOCG00000010786	-	90	73.639	ENSCPBG00000010904	RBFOX3	98	77.301	Chrysemys_picta_bellii
ENSAOCG00000010786	-	71	93.333	ENSCANG00000043120	RBFOX3	95	76.412	Colobus_angolensis_palliatus
ENSAOCG00000010786	-	71	86.207	ENSCGRG00001019476	Rbfox3	80	83.673	Cricetulus_griseus_chok1gshd
ENSAOCG00000010786	-	71	86.207	ENSCGRG00000003268	Rbfox3	80	83.673	Cricetulus_griseus_crigri
ENSAOCG00000010786	-	99	92.758	ENSCSEG00000015567	RBFOX3	99	92.758	Cynoglossus_semilaevis
ENSAOCG00000010786	-	98	65.147	ENSCSEG00000020606	RBFOX3	100	62.264	Cynoglossus_semilaevis
ENSAOCG00000010786	-	94	75.000	ENSCVAG00000006882	rbfox3b	98	74.167	Cyprinodon_variegatus
ENSAOCG00000010786	-	97	83.019	ENSDARG00000010083	rbfox3a	100	83.019	Danio_rerio
ENSAOCG00000010786	-	84	75.817	ENSDARG00000074310	rbfox3b	93	76.289	Danio_rerio
ENSAOCG00000010786	-	63	67.708	ENSDNOG00000039391	RBFOX3	60	87.500	Dasypus_novemcinctus
ENSAOCG00000010786	-	80	56.857	ENSDORG00000005352	Rbfox3	76	83.333	Dipodomys_ordii
ENSAOCG00000010786	-	95	61.867	ENSEBUG00000002129	RBFOX3	96	65.988	Eptatretus_burgeri
ENSAOCG00000010786	-	73	60.137	ENSEBUG00000013559	RBFOX3	71	62.548	Eptatretus_burgeri
ENSAOCG00000010786	-	79	75.828	ENSEASG00005005059	RBFOX3	95	77.815	Equus_asinus_asinus
ENSAOCG00000010786	-	80	75.817	ENSECAG00000023811	RBFOX3	95	78.146	Equus_caballus
ENSAOCG00000010786	-	67	84.615	ENSEEUG00000013974	RBFOX3	66	84.615	Erinaceus_europaeus
ENSAOCG00000010786	-	98	79.459	ENSELUG00000017963	rbfox3b	97	78.649	Esox_lucius
ENSAOCG00000010786	-	95	76.454	ENSFCAG00000002555	RBFOX3	100	77.348	Felis_catus
ENSAOCG00000010786	-	90	58.838	ENSFALG00000012288	RBFOX3	97	59.288	Ficedula_albicollis
ENSAOCG00000010786	-	80	60.734	ENSFDAG00000007489	RBFOX3	78	82.000	Fukomys_damarensis
ENSAOCG00000010786	-	83	71.338	ENSFHEG00000008550	rbfox3b	96	70.333	Fundulus_heteroclitus
ENSAOCG00000010786	-	83	90.196	ENSGMOG00000019304	-	69	90.196	Gadus_morhua
ENSAOCG00000010786	-	97	76.839	ENSGALG00000032889	RBFOX3	100	78.611	Gallus_gallus
ENSAOCG00000010786	-	98	80.618	ENSGAFG00000005025	rbfox3b	100	79.775	Gambusia_affinis
ENSAOCG00000010786	-	79	94.118	ENSGACG00000002138	-	73	94.118	Gasterosteus_aculeatus
ENSAOCG00000010786	-	96	77.839	ENSGAGG00000020025	RBFOX3	97	78.512	Gopherus_agassizii
ENSAOCG00000010786	-	71	93.333	ENSGGOG00000012546	RBFOX3	95	76.412	Gorilla_gorilla
ENSAOCG00000010786	-	87	88.146	ENSHBUG00000023098	-	95	88.146	Haplochromis_burtoni
ENSAOCG00000010786	-	98	80.000	ENSHBUG00000018099	rbfox3b	97	79.459	Haplochromis_burtoni
ENSAOCG00000010786	-	80	65.169	ENSHGLG00000008679	RBFOX3	96	65.057	Heterocephalus_glaber_female
ENSAOCG00000010786	-	80	62.185	ENSHGLG00100014739	RBFOX3	82	75.100	Heterocephalus_glaber_male
ENSAOCG00000010786	-	77	76.846	ENSHCOG00000007444	RBFOX3	76	77.027	Hippocampus_comes
ENSAOCG00000010786	-	85	83.172	ENSHCOG00000001863	RBFOX3	90	82.653	Hippocampus_comes
ENSAOCG00000010786	-	83	68.580	ENSIPUG00000021966	rbfox3b	98	78.626	Ictalurus_punctatus
ENSAOCG00000010786	-	97	81.402	ENSIPUG00000012010	rbfox3a	100	81.402	Ictalurus_punctatus
ENSAOCG00000010786	-	80	64.865	ENSSTOG00000026817	RBFOX3	95	64.407	Ictidomys_tridecemlineatus
ENSAOCG00000010786	-	71	93.103	ENSJJAG00000014167	Rbfox3	79	89.583	Jaculus_jaculus
ENSAOCG00000010786	-	97	80.381	ENSKMAG00000006726	rbfox3b	100	79.564	Kryptolebias_marmoratus
ENSAOCG00000010786	-	97	91.008	ENSLBEG00000022508	-	100	91.008	Labrus_bergylta
ENSAOCG00000010786	-	98	80.811	ENSLBEG00000004030	rbfox3b	100	80.109	Labrus_bergylta
ENSAOCG00000010786	-	88	70.166	ENSLACG00000018409	-	92	70.166	Latimeria_chalumnae
ENSAOCG00000010786	-	50	59.043	ENSLACG00000000021	-	95	59.563	Latimeria_chalumnae
ENSAOCG00000010786	-	86	85.276	ENSLOCG00000012267	rbfox3a	98	85.276	Lepisosteus_oculatus
ENSAOCG00000010786	-	87	70.360	ENSLAFG00000016623	RBFOX3	77	86.538	Loxodonta_africana
ENSAOCG00000010786	-	80	65.075	ENSMFAG00000002247	RBFOX3	79	89.583	Macaca_fascicularis
ENSAOCG00000010786	-	71	93.103	ENSMMUG00000023028	RBFOX3	95	76.412	Macaca_mulatta
ENSAOCG00000010786	-	79	75.000	ENSMNEG00000041147	RBFOX3	95	76.080	Macaca_nemestrina
ENSAOCG00000010786	-	79	75.333	ENSMLEG00000025686	RBFOX3	95	76.412	Mandrillus_leucophaeus
ENSAOCG00000010786	-	87	88.923	ENSMAMG00000020600	-	94	88.923	Mastacembelus_armatus
ENSAOCG00000010786	-	83	81.188	ENSMAMG00000019810	rbfox3b	95	79.861	Mastacembelus_armatus
ENSAOCG00000010786	-	79	75.316	ENSMZEG00005003055	-	81	74.534	Maylandia_zebra
ENSAOCG00000010786	-	98	80.000	ENSMZEG00005000781	rbfox3b	100	79.564	Maylandia_zebra
ENSAOCG00000010786	-	61	78.281	ENSMGAG00000005600	RBFOX3	83	78.733	Meleagris_gallopavo
ENSAOCG00000010786	-	80	64.306	ENSMAUG00000013543	Rbfox3	80	83.333	Mesocricetus_auratus
ENSAOCG00000010786	-	75	93.333	ENSMICG00000014898	RBFOX3	96	76.412	Microcebus_murinus
ENSAOCG00000010786	-	80	63.352	ENSMOCG00000015373	Rbfox3	79	87.500	Microtus_ochrogaster
ENSAOCG00000010786	-	98	79.501	ENSMMOG00000020193	rbfox3b	97	79.501	Mola_mola
ENSAOCG00000010786	-	95	76.667	ENSMODG00000002089	RBFOX3	100	77.562	Monodelphis_domestica
ENSAOCG00000010786	-	98	89.730	ENSMALG00000018270	-	100	89.918	Monopterus_albus
ENSAOCG00000010786	-	97	79.564	ENSMALG00000020407	rbfox3b	100	78.747	Monopterus_albus
ENSAOCG00000010786	-	80	76.393	MGP_CAROLIEiJ_G0017487	Rbfox3	96	89.209	Mus_caroli
ENSAOCG00000010786	-	80	76.066	ENSMUSG00000025576	Rbfox3	96	89.209	Mus_musculus
ENSAOCG00000010786	-	71	89.655	MGP_PahariEiJ_G0018614	Rbfox3	96	89.928	Mus_pahari
ENSAOCG00000010786	-	80	76.721	MGP_SPRETEiJ_G0018331	Rbfox3	96	89.209	Mus_spretus
ENSAOCG00000010786	-	87	69.377	ENSMPUG00000012319	RBFOX3	96	69.892	Mustela_putorius_furo
ENSAOCG00000010786	-	80	66.193	ENSNGAG00000018006	Rbfox3	79	89.583	Nannospalax_galili
ENSAOCG00000010786	-	87	88.254	ENSNBRG00000022885	-	92	87.227	Neolamprologus_brichardi
ENSAOCG00000010786	-	98	76.966	ENSNBRG00000010102	rbfox3b	100	76.966	Neolamprologus_brichardi
ENSAOCG00000010786	-	83	57.190	ENSNLEG00000000153	-	76	90.000	Nomascus_leucogenys
ENSAOCG00000010786	-	76	83.333	ENSMEUG00000004218	-	79	89.583	Notamacropus_eugenii
ENSAOCG00000010786	-	71	76.166	ENSOPRG00000016279	-	77	76.562	Ochotona_princeps
ENSAOCG00000010786	-	79	77.741	ENSODEG00000009433	RBFOX3	95	77.741	Octodon_degus
ENSAOCG00000010786	-	94	75.278	ENSONIG00000009549	rbfox3b	98	74.444	Oreochromis_niloticus
ENSAOCG00000010786	-	86	88.308	ENSONIG00000007282	-	95	88.308	Oreochromis_niloticus
ENSAOCG00000010786	-	67	57.047	ENSOCUG00000014217	RBFOX3	57	83.333	Oryctolagus_cuniculus
ENSAOCG00000010786	-	98	80.435	ENSORLG00000000905	rbfox3b	79	79.076	Oryzias_latipes
ENSAOCG00000010786	-	98	80.435	ENSORLG00020018030	rbfox3b	99	79.076	Oryzias_latipes_hni
ENSAOCG00000010786	-	98	80.163	ENSORLG00015009200	rbfox3b	99	79.348	Oryzias_latipes_hsok
ENSAOCG00000010786	-	83	78.233	ENSOMEG00000014677	rbfox3b	85	78.086	Oryzias_melastigma
ENSAOCG00000010786	-	87	75.684	ENSOGAG00000029595	RBFOX3	95	72.269	Otolemur_garnettii
ENSAOCG00000010786	-	83	58.453	ENSOARG00000002908	RBFOX3	89	54.821	Ovis_aries
ENSAOCG00000010786	-	65	79.842	ENSPPAG00000025383	RBFOX3	87	79.842	Pan_paniscus
ENSAOCG00000010786	-	77	65.000	ENSPPRG00000007819	RBFOX3	80	85.417	Panthera_pardus
ENSAOCG00000010786	-	71	93.333	ENSPTRG00000009727	RBFOX3	95	76.412	Pan_troglodytes
ENSAOCG00000010786	-	79	75.333	ENSPANG00000019837	RBFOX3	95	76.412	Papio_anubis
ENSAOCG00000010786	-	96	62.740	ENSPKIG00000022633	-	97	62.772	Paramormyrops_kingsleyae
ENSAOCG00000010786	-	98	75.202	ENSPKIG00000010299	rbfox3a	97	75.202	Paramormyrops_kingsleyae
ENSAOCG00000010786	-	85	78.526	ENSPMGG00000008000	rbfox3b	97	79.167	Periophthalmus_magnuspinnatus
ENSAOCG00000010786	-	80	63.636	ENSPEMG00000010500	Rbfox3	79	87.500	Peromyscus_maniculatus_bairdii
ENSAOCG00000010786	-	51	64.623	ENSPMAG00000008689	rbfox3b	94	70.984	Petromyzon_marinus
ENSAOCG00000010786	-	95	68.215	ENSPCIG00000005766	RBFOX3	85	89.583	Phascolarctos_cinereus
ENSAOCG00000010786	-	83	88.235	ENSPFOG00000018294	rbfox3b	95	74.105	Poecilia_formosa
ENSAOCG00000010786	-	64	89.744	ENSPLAG00000000481	rbfox3b	76	88.462	Poecilia_latipinna
ENSAOCG00000010786	-	83	71.019	ENSPMEG00000022997	rbfox3b	96	70.333	Poecilia_mexicana
ENSAOCG00000010786	-	98	80.593	ENSPREG00000012886	rbfox3b	100	80.054	Poecilia_reticulata
ENSAOCG00000010786	-	73	73.308	ENSPPYG00000008704	RBFOX3	81	74.101	Pongo_abelii
ENSAOCG00000010786	-	77	63.006	ENSPCAG00000001401	RBFOX3	80	87.500	Procavia_capensis
ENSAOCG00000010786	-	75	93.103	ENSPCOG00000012689	RBFOX3	79	89.583	Propithecus_coquereli
ENSAOCG00000010786	-	71	86.207	ENSPVAG00000015243	RBFOX3	79	83.673	Pteropus_vampyrus
ENSAOCG00000010786	-	98	76.966	ENSPNYG00000010414	rbfox3b	100	76.966	Pundamilia_nyererei
ENSAOCG00000010786	-	100	90.083	ENSPNYG00000009079	-	99	90.083	Pundamilia_nyererei
ENSAOCG00000010786	-	98	82.667	ENSPNAG00000002889	rbfox3a	100	82.796	Pygocentrus_nattereri
ENSAOCG00000010786	-	83	68.543	ENSPNAG00000018173	rbfox3b	86	67.944	Pygocentrus_nattereri
ENSAOCG00000010786	-	72	84.848	ENSRNOG00000003386	Rbfox3	95	76.821	Rattus_norvegicus
ENSAOCG00000010786	-	95	76.454	ENSRBIG00000040449	RBFOX3	100	77.348	Rhinopithecus_bieti
ENSAOCG00000010786	-	79	75.333	ENSRROG00000000766	RBFOX3	95	76.412	Rhinopithecus_roxellana
ENSAOCG00000010786	-	73	93.103	ENSSBOG00000031591	RBFOX3	95	75.748	Saimiri_boliviensis_boliviensis
ENSAOCG00000010786	-	88	69.837	ENSSHAG00000016076	RBFOX3	95	67.000	Sarcophilus_harrisii
ENSAOCG00000010786	-	95	79.387	ENSSFOG00015023260	rbfox3a	100	76.630	Scleropages_formosus
ENSAOCG00000010786	-	95	65.097	ENSSFOG00015004716	RBFOX3	100	66.574	Scleropages_formosus
ENSAOCG00000010786	-	97	86.921	ENSSMAG00000019052	-	100	86.921	Scophthalmus_maximus
ENSAOCG00000010786	-	95	71.053	ENSSMAG00000012618	rbfox3b	88	69.133	Scophthalmus_maximus
ENSAOCG00000010786	-	99	90.278	ENSSDUG00000015801	-	100	90.000	Seriola_dumerili
ENSAOCG00000010786	-	83	71.338	ENSSDUG00000023183	rbfox3b	96	70.333	Seriola_dumerili
ENSAOCG00000010786	-	97	80.926	ENSSLDG00000000149	rbfox3b	100	80.109	Seriola_lalandi_dorsalis
ENSAOCG00000010786	-	99	93.611	ENSSLDG00000016098	-	100	93.611	Seriola_lalandi_dorsalis
ENSAOCG00000010786	-	95	68.156	ENSSPUG00000011733	RBFOX3	95	77.152	Sphenodon_punctatus
ENSAOCG00000010786	-	98	79.494	ENSSPAG00000017571	rbfox3b	100	78.652	Stegastes_partitus
ENSAOCG00000010786	-	69	92.045	ENSSPAG00000004898	-	79	92.045	Stegastes_partitus
ENSAOCG00000010786	-	72	80.435	ENSSSCG00000039498	RBFOX3	79	88.462	Sus_scrofa
ENSAOCG00000010786	-	90	74.238	ENSTRUG00000004894	rbfox3b	96	74.719	Takifugu_rubripes
ENSAOCG00000010786	-	88	70.604	ENSTNIG00000011278	rbfox3b	97	67.866	Tetraodon_nigroviridis
ENSAOCG00000010786	-	77	59.710	ENSTTRG00000003676	RBFOX3	79	89.583	Tursiops_truncatus
ENSAOCG00000010786	-	79	76.000	ENSUAMG00000004668	RBFOX3	95	77.333	Ursus_americanus
ENSAOCG00000010786	-	95	77.348	ENSVVUG00000017864	RBFOX3	85	89.583	Vulpes_vulpes
ENSAOCG00000010786	-	92	57.653	ENSXETG00000020236	rbfox3	96	58.639	Xenopus_tropicalis
ENSAOCG00000010786	-	94	75.000	ENSXCOG00000018262	rbfox3b	96	83.275	Xiphophorus_couchianus
ENSAOCG00000010786	-	98	80.811	ENSXMAG00000012939	rbfox3b	97	80.000	Xiphophorus_maculatus