EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000010915 (Gene tree)
Gene ID: 111587494
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 6302 bases
Position: chrNXFZ01005769.1:215484-221785
Accession: 111587494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000007203	zf-CCHC	PF00098.23	5.3e-08	1	1
ENSAOCP00000007203	RRM_5	PF13893.6	1e-07	1	1
ENSAOCP00000007203	RRM_1	PF00076.22	3e-31	1	2
ENSAOCP00000007203	RRM_1	PF00076.22	3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000003244	-	4361	XM_023297469	ENSAOCP00000007203	420 (aa)	XP_023153237	UPI000C3065B0

Gene Model

Click here to download ENSAOCG00000010915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000010915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000010915	rbm4.1	61	57.237	ENSAOCG00000007992	rbm4.3	92	56.688
ENSAOCG00000010915	rbm4.1	100	56.000	ENSAOCG00000008015	rbm4.3	100	40.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000010915	rbm4.1	100	98.095	ENSAPOG00000012353	rbm4.1	100	98.095	Acanthochromis_polyacanthus
ENSAOCG00000010915	rbm4.1	100	92.399	ENSACIG00000016482	rbm4.1	100	92.399	Amphilophus_citrinellus
ENSAOCG00000010915	rbm4.1	100	100.000	ENSAPEG00000009494	rbm4.1	100	100.000	Amphiprion_percula
ENSAOCG00000010915	rbm4.1	100	92.637	ENSATEG00000001904	rbm4.1	100	92.637	Anabas_testudineus
ENSAOCG00000010915	rbm4.1	99	46.429	ENSACLG00000007740	-	99	44.965	Astatotilapia_calliptera
ENSAOCG00000010915	rbm4.1	100	91.924	ENSACLG00000007722	rbm4.1	100	91.924	Astatotilapia_calliptera
ENSAOCG00000010915	rbm4.1	100	62.559	ENSAMXG00000036611	rbm4.1	100	63.357	Astyanax_mexicanus
ENSAOCG00000010915	rbm4.1	100	75.714	ENSCSEG00000014365	rbm4.1	100	75.714	Cynoglossus_semilaevis
ENSAOCG00000010915	rbm4.1	97	50.358	ENSCSEG00000014359	-	98	49.649	Cynoglossus_semilaevis
ENSAOCG00000010915	rbm4.1	100	80.760	ENSCVAG00000019349	rbm4.1	100	80.760	Cyprinodon_variegatus
ENSAOCG00000010915	rbm4.1	100	70.283	ENSDARG00000036386	rbm4.1	100	70.283	Danio_rerio
ENSAOCG00000010915	rbm4.1	100	50.698	ENSDARG00000055080	rbm4.2	100	51.748	Danio_rerio
ENSAOCG00000010915	rbm4.1	100	65.904	ENSELUG00000013205	rbm4.1	100	68.471	Esox_lucius
ENSAOCG00000010915	rbm4.1	100	80.378	ENSFHEG00000022926	rbm4.1	100	79.905	Fundulus_heteroclitus
ENSAOCG00000010915	rbm4.1	92	51.777	ENSGMOG00000007455	-	92	51.750	Gadus_morhua
ENSAOCG00000010915	rbm4.1	100	69.176	ENSGMOG00000007464	rbm4.1	100	70.755	Gadus_morhua
ENSAOCG00000010915	rbm4.1	100	79.669	ENSGAFG00000019302	rbm4.1	100	78.960	Gambusia_affinis
ENSAOCG00000010915	rbm4.1	99	92.188	ENSGACG00000000822	rbm4.1	100	80.378	Gasterosteus_aculeatus
ENSAOCG00000010915	rbm4.1	96	48.166	ENSGACG00000000821	-	96	47.381	Gasterosteus_aculeatus
ENSAOCG00000010915	rbm4.1	100	91.924	ENSHBUG00000011610	rbm4.1	100	91.924	Haplochromis_burtoni
ENSAOCG00000010915	rbm4.1	96	70.025	ENSHCOG00000011403	rbm4.1	98	70.500	Hippocampus_comes
ENSAOCG00000010915	rbm4.1	100	64.840	ENSIPUG00000022931	rbm4.1	100	65.604	Ictalurus_punctatus
ENSAOCG00000010915	rbm4.1	100	50.708	ENSIPUG00000022937	rbm4.2	100	50.701	Ictalurus_punctatus
ENSAOCG00000010915	rbm4.1	100	80.569	ENSKMAG00000006556	rbm4.1	100	80.569	Kryptolebias_marmoratus
ENSAOCG00000010915	rbm4.1	100	86.698	ENSLBEG00000019782	rbm4.1	100	86.698	Labrus_bergylta
ENSAOCG00000010915	rbm4.1	95	49.377	ENSLBEG00000019756	-	90	60.256	Labrus_bergylta
ENSAOCG00000010915	rbm4.1	100	92.399	ENSMAMG00000001765	rbm4.1	100	92.399	Mastacembelus_armatus
ENSAOCG00000010915	rbm4.1	95	50.485	ENSMAMG00000001760	-	95	48.921	Mastacembelus_armatus
ENSAOCG00000010915	rbm4.1	100	91.924	ENSMZEG00005009205	rbm4.1	100	91.924	Maylandia_zebra
ENSAOCG00000010915	rbm4.1	100	87.234	ENSMMOG00000020479	rbm4.1	100	87.234	Mola_mola
ENSAOCG00000010915	rbm4.1	100	90.261	ENSMALG00000020544	rbm4.1	100	90.261	Monopterus_albus
ENSAOCG00000010915	rbm4.1	95	52.605	ENSMALG00000020557	-	94	50.728	Monopterus_albus
ENSAOCG00000010915	rbm4.1	100	92.162	ENSNBRG00000017755	rbm4.1	100	92.162	Neolamprologus_brichardi
ENSAOCG00000010915	rbm4.1	100	91.924	ENSONIG00000015730	rbm4.1	100	91.924	Oreochromis_niloticus
ENSAOCG00000010915	rbm4.1	100	79.524	ENSORLG00000012496	rbm4.1	100	80.048	Oryzias_latipes
ENSAOCG00000010915	rbm4.1	100	79.524	ENSORLG00020012454	rbm4.1	100	80.048	Oryzias_latipes_hni
ENSAOCG00000010915	rbm4.1	100	79.762	ENSORLG00015013678	rbm4.1	100	80.285	Oryzias_latipes_hsok
ENSAOCG00000010915	rbm4.1	100	80.760	ENSOMEG00000001001	rbm4.1	100	80.760	Oryzias_melastigma
ENSAOCG00000010915	rbm4.1	100	63.785	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSAOCG00000010915	rbm4.1	100	79.905	ENSPFOG00000012675	rbm4.1	100	79.196	Poecilia_formosa
ENSAOCG00000010915	rbm4.1	99	46.043	ENSPFOG00000012685	-	99	45.863	Poecilia_formosa
ENSAOCG00000010915	rbm4.1	100	79.905	ENSPLAG00000018572	rbm4.1	100	79.196	Poecilia_latipinna
ENSAOCG00000010915	rbm4.1	100	79.905	ENSPMEG00000006290	rbm4.1	100	79.196	Poecilia_mexicana
ENSAOCG00000010915	rbm4.1	99	44.365	ENSPREG00000003764	-	92	61.881	Poecilia_reticulata
ENSAOCG00000010915	rbm4.1	100	79.905	ENSPREG00000003724	rbm4.1	100	79.196	Poecilia_reticulata
ENSAOCG00000010915	rbm4.1	100	91.924	ENSPNYG00000004662	rbm4.1	100	91.924	Pundamilia_nyererei
ENSAOCG00000010915	rbm4.1	100	51.740	ENSPNAG00000013057	rbm4.2	100	51.740	Pygocentrus_nattereri
ENSAOCG00000010915	rbm4.1	100	67.689	ENSPNAG00000002539	rbm4.1	100	69.249	Pygocentrus_nattereri
ENSAOCG00000010915	rbm4.1	100	64.486	ENSSFOG00015021996	sf1	100	64.486	Scleropages_formosus
ENSAOCG00000010915	rbm4.1	100	85.714	ENSSMAG00000007571	rbm4.1	100	83.810	Scophthalmus_maximus
ENSAOCG00000010915	rbm4.1	100	94.062	ENSSDUG00000003925	rbm4.1	100	94.062	Seriola_dumerili
ENSAOCG00000010915	rbm4.1	95	52.798	ENSSDUG00000003936	-	97	51.429	Seriola_dumerili
ENSAOCG00000010915	rbm4.1	95	49.755	ENSSLDG00000013157	-	97	51.196	Seriola_lalandi_dorsalis
ENSAOCG00000010915	rbm4.1	100	94.062	ENSSLDG00000013147	rbm4.1	100	94.062	Seriola_lalandi_dorsalis
ENSAOCG00000010915	rbm4.1	100	96.445	ENSSPAG00000019053	rbm4.1	100	96.445	Stegastes_partitus
ENSAOCG00000010915	rbm4.1	95	49.380	ENSSPAG00000019046	-	95	47.942	Stegastes_partitus
ENSAOCG00000010915	rbm4.1	100	80.238	ENSTRUG00000013334	rbm4.1	100	79.286	Takifugu_rubripes
ENSAOCG00000010915	rbm4.1	99	47.242	ENSTRUG00000013328	-	94	47.677	Takifugu_rubripes
ENSAOCG00000010915	rbm4.1	100	89.216	ENSTNIG00000004821	rbm4.1	100	56.429	Tetraodon_nigroviridis
ENSAOCG00000010915	rbm4.1	96	45.255	ENSTNIG00000000316	-	96	47.482	Tetraodon_nigroviridis
ENSAOCG00000010915	rbm4.1	100	79.905	ENSXCOG00000003731	rbm4.1	100	79.196	Xiphophorus_couchianus
ENSAOCG00000010915	rbm4.1	99	46.523	ENSXMAG00000008059	-	87	65.775	Xiphophorus_maculatus
ENSAOCG00000010915	rbm4.1	100	79.669	ENSXMAG00000008069	rbm4.1	100	78.960	Xiphophorus_maculatus