EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000011392 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 6352 bases
Position: chrNXFZ01003253.1:11993-18344
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000024505	RNA_pol_Rpb1_5	PF04998.17	7.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000002596	-	372	-	ENSAOCP00000024505	123 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000011392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000011392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000011392	-	76	93.548	ENSAOCG00000011482	-	73	93.548
ENSAOCG00000011392	-	88	95.370	ENSAOCG00000019295	-	95	95.370
ENSAOCG00000011392	-	99	87.097	ENSAOCG00000021484	-	99	87.097
ENSAOCG00000011392	-	76	93.548	ENSAOCG00000004721	-	72	93.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000011392	-	96	72.308	ENSG00000148606	POLR3A	80	72.308	Homo_sapiens
ENSAOCG00000011392	-	96	76.923	ENSAPOG00000017553	-	77	76.923	Acanthochromis_polyacanthus
ENSAOCG00000011392	-	81	86.364	ENSAPEG00000004262	-	63	86.364	Amphiprion_percula
ENSAOCG00000011392	-	76	96.774	ENSAPEG00000024794	-	71	96.774	Amphiprion_percula
ENSAOCG00000011392	-	74	96.703	ENSAPEG00000004431	-	58	96.703	Amphiprion_percula
ENSAOCG00000011392	-	99	87.903	ENSAPEG00000020449	-	99	87.903	Amphiprion_percula
ENSAOCG00000011392	-	74	96.703	ENSAPEG00000021935	-	58	96.703	Amphiprion_percula
ENSAOCG00000011392	-	88	95.370	ENSAPEG00000004479	-	95	95.370	Amphiprion_percula
ENSAOCG00000011392	-	88	96.296	ENSAPEG00000019224	-	95	96.296	Amphiprion_percula
ENSAOCG00000011392	-	74	96.703	ENSAPEG00000004452	-	58	96.703	Amphiprion_percula
ENSAOCG00000011392	-	100	91.057	ENSAPEG00000011670	-	84	91.057	Amphiprion_percula
ENSAOCG00000011392	-	74	96.703	ENSAPEG00000001594	-	58	96.703	Amphiprion_percula
ENSAOCG00000011392	-	96	72.308	ENSANAG00000028922	POLR3A	78	73.438	Aotus_nancymaae
ENSAOCG00000011392	-	96	72.308	ENSCJAG00000001015	POLR3A	79	72.308	Callithrix_jacchus
ENSAOCG00000011392	-	96	72.308	ENSCAFG00020014711	POLR3A	59	72.308	Canis_lupus_dingo
ENSAOCG00000011392	-	96	72.308	ENSCCAG00000032995	POLR3A	78	73.438	Cebus_capucinus
ENSAOCG00000011392	-	96	72.308	ENSCATG00000035842	POLR3A	80	72.308	Cercocebus_atys
ENSAOCG00000011392	-	96	71.538	ENSCANG00000041071	POLR3A	80	71.538	Colobus_angolensis_palliatus
ENSAOCG00000011392	-	85	70.755	ENSCGRG00001005169	-	77	70.755	Cricetulus_griseus_chok1gshd
ENSAOCG00000011392	-	96	72.308	ENSGGOG00000027729	POLR3A	80	72.308	Gorilla_gorilla
ENSAOCG00000011392	-	96	71.538	ENSIPUG00000001736	-	82	71.538	Ictalurus_punctatus
ENSAOCG00000011392	-	96	71.538	ENSJJAG00000006291	-	75	71.538	Jaculus_jaculus
ENSAOCG00000011392	-	96	72.308	ENSMFAG00000032218	POLR3A	78	73.438	Macaca_fascicularis
ENSAOCG00000011392	-	96	72.308	ENSMMUG00000005514	POLR3A	80	72.308	Macaca_mulatta
ENSAOCG00000011392	-	96	72.308	ENSMLEG00000030014	POLR3A	80	72.308	Mandrillus_leucophaeus
ENSAOCG00000011392	-	96	72.308	ENSMICG00000005937	POLR3A	75	72.308	Microcebus_murinus
ENSAOCG00000011392	-	96	72.308	ENSPPAG00000031986	-	80	72.308	Pan_paniscus
ENSAOCG00000011392	-	96	72.308	ENSPTRG00000002664	POLR3A	80	72.308	Pan_troglodytes
ENSAOCG00000011392	-	96	72.308	ENSPANG00000022508	POLR3A	80	72.308	Papio_anubis
ENSAOCG00000011392	-	83	79.464	ENSPMGG00000015856	-	69	79.464	Periophthalmus_magnuspinnatus
ENSAOCG00000011392	-	96	72.308	ENSPCOG00000028311	POLR3A	69	72.308	Propithecus_coquereli
ENSAOCG00000011392	-	96	72.308	ENSRBIG00000034967	POLR3A	80	72.308	Rhinopithecus_bieti
ENSAOCG00000011392	-	96	72.308	ENSRROG00000025527	POLR3A	80	72.308	Rhinopithecus_roxellana
ENSAOCG00000011392	-	96	72.308	ENSSBOG00000022199	POLR3A	78	72.308	Saimiri_boliviensis_boliviensis