EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAOCG00000011510 (Gene tree)
Gene ID
111588152
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Amphiprion_ocellaris
Status
putative
Strand
Plus strand
Length
21415 bases
Position
chrNXFZ01005951.1:288695-310109
Accession
111588152
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAOCP00000024555CSDPF00313.227.1e-8115
ENSAOCP00000024555CSDPF00313.227.1e-8125
ENSAOCP00000024555CSDPF00313.227.1e-8135
ENSAOCP00000024555CSDPF00313.227.1e-8145
ENSAOCP00000024555CSDPF00313.227.1e-8155
ENSAOCP00000007577CSDPF00313.221.5e-8015
ENSAOCP00000007577CSDPF00313.221.5e-8025
ENSAOCP00000007577CSDPF00313.221.5e-8035
ENSAOCP00000007577CSDPF00313.221.5e-8045
ENSAOCP00000007577CSDPF00313.221.5e-8055
ENSAOCP00000024549CSDPF00313.222.9e-8015
ENSAOCP00000024549CSDPF00313.222.9e-8025
ENSAOCP00000024549CSDPF00313.222.9e-8035
ENSAOCP00000024549CSDPF00313.222.9e-8045
ENSAOCP00000024549CSDPF00313.222.9e-8055
ENSAOCP00000024536CSDPF00313.224.4e-8015
ENSAOCP00000024536CSDPF00313.224.4e-8025
ENSAOCP00000024536CSDPF00313.224.4e-8035
ENSAOCP00000024536CSDPF00313.224.4e-8045
ENSAOCP00000024536CSDPF00313.224.4e-8055
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAOCT00000002613-2307-ENSAOCP00000024555768 (aa)--
ENSAOCT00000002495-8029XM_023298332ENSAOCP00000024549931 (aa)XP_023154100UPI000C3065AF
ENSAOCT00000002580-7840XM_023298339ENSAOCP00000007577868 (aa)XP_023154107UPI000C3070FC
ENSAOCT00000002525-7999XM_023298334ENSAOCP00000024536921 (aa)XP_023154102UPI000C3125D1
Gene Model
Click here to download ENSAOCG00000011510's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000011510's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAOCG00000011510csde110077.792ENSG00000009307CSDE110085.294Homo_sapiens
ENSAOCG00000011510csde110099.424ENSAPOG00000015538csde110099.424Acanthochromis_polyacanthus
ENSAOCG00000011510csde110077.013ENSAMEG00000017129CSDE19477.013Ailuropoda_melanoleuca
ENSAOCG00000011510csde19093.243ENSACIG00000015175csde110093.243Amphilophus_citrinellus
ENSAOCG00000011510csde110099.885ENSAPEG00000007194csde110099.885Amphiprion_percula
ENSAOCG00000011510csde110094.668ENSATEG00000003864csde110094.668Anabas_testudineus
ENSAOCG00000011510csde110079.844ENSAPLG00000008797CSDE110079.844Anas_platyrhynchos
ENSAOCG00000011510csde110076.875ENSACAG00000003120CSDE110077.656Anolis_carolinensis
ENSAOCG00000011510csde110077.662ENSANAG00000024665CSDE19973.782Aotus_nancymaae
ENSAOCG00000011510csde19362.191ENSANAG00000028396-9163.265Aotus_nancymaae
ENSAOCG00000011510csde110093.368ENSACLG00000013296csde110093.368Astatotilapia_calliptera
ENSAOCG00000011510csde110087.808ENSAMXG00000007436csde110087.808Astyanax_mexicanus
ENSAOCG00000011510csde110077.403ENSBTAG00000000678CSDE110077.403Bos_taurus
ENSAOCG00000011510csde110077.662ENSCJAG00000012565CSDE19973.898Callithrix_jacchus
ENSAOCG00000011510csde19878.249ENSCAFG00000009618CSDE19478.249Canis_familiaris
ENSAOCG00000011510csde110078.052ENSCAFG00020000481CSDE110078.052Canis_lupus_dingo
ENSAOCG00000011510csde110077.532ENSCHIG00000017250CSDE110077.532Capra_hircus
ENSAOCG00000011510csde110077.792ENSTSYG00000003747CSDE110077.792Carlito_syrichta
ENSAOCG00000011510csde19569.231ENSCAPG00000015128CSDE110069.231Cavia_aperea
ENSAOCG00000011510csde110072.348ENSCPOG00000040388CSDE110072.348Cavia_porcellus
ENSAOCG00000011510csde19655.457ENSCCAG00000030878-9155.457Cebus_capucinus
ENSAOCG00000011510csde110077.662ENSCCAG00000036794CSDE110075.488Cebus_capucinus
ENSAOCG00000011510csde19556.872ENSCCAG00000033677-9956.872Cebus_capucinus
ENSAOCG00000011510csde110077.792ENSCATG00000036962CSDE19777.792Cercocebus_atys
ENSAOCG00000011510csde110078.052ENSCLAG00000006618CSDE110078.052Chinchilla_lanigera
ENSAOCG00000011510csde110074.782ENSCSAG00000001658CSDE19974.014Chlorocebus_sabaeus
ENSAOCG00000011510csde19683.178ENSCHOG00000000918CSDE18980.488Choloepus_hoffmanni
ENSAOCG00000011510csde110080.104ENSCPBG00000016547CSDE110080.104Chrysemys_picta_bellii
ENSAOCG00000011510csde19742.611ENSCING00000014465-9841.714Ciona_intestinalis
ENSAOCG00000011510csde19741.738ENSCSAVG00000008100-10041.951Ciona_savignyi
ENSAOCG00000011510csde18978.967ENSCANG00000031069-9478.967Colobus_angolensis_palliatus
ENSAOCG00000011510csde110077.792ENSCANG00000035096CSDE19777.792Colobus_angolensis_palliatus
ENSAOCG00000011510csde110063.506ENSCGRG00001014011-10063.506Cricetulus_griseus_chok1gshd
ENSAOCG00000011510csde110077.143ENSCGRG00001016833-10077.143Cricetulus_griseus_chok1gshd
ENSAOCG00000011510csde19673.778ENSCGRG00000002225-10073.778Cricetulus_griseus_crigri
ENSAOCG00000011510csde110073.913ENSCGRG00000005831-10073.913Cricetulus_griseus_crigri
ENSAOCG00000011510csde110092.458ENSCSEG00000002620csde110092.458Cynoglossus_semilaevis
ENSAOCG00000011510csde110092.328ENSCVAG00000001344csde110092.328Cyprinodon_variegatus
ENSAOCG00000011510csde110084.355ENSDARG00000074758csde110089.568Danio_rerio
ENSAOCG00000011510csde110078.080ENSDNOG00000010287-9378.080Dasypus_novemcinctus
ENSAOCG00000011510csde15957.203ENSDNOG00000034464-9957.203Dasypus_novemcinctus
ENSAOCG00000011510csde19976.453ENSDORG00000011609Csde110076.453Dipodomys_ordii
ENSAOCG00000011510csde19648.566FBgn0263352Unr7947.705Drosophila_melanogaster
ENSAOCG00000011510csde19380.488ENSETEG00000002491-8672.334Echinops_telfairi
ENSAOCG00000011510csde17953.795ENSETEG00000007109-9953.795Echinops_telfairi
ENSAOCG00000011510csde19069.510ENSETEG00000006280-9969.510Echinops_telfairi
ENSAOCG00000011510csde19960.547ENSETEG00000013678-9960.547Echinops_telfairi
ENSAOCG00000011510csde19953.571ENSEBUG00000008647csde19952.392Eptatretus_burgeri
ENSAOCG00000011510csde110078.312ENSEASG00005006284CSDE110076.098Equus_asinus_asinus
ENSAOCG00000011510csde110078.312ENSECAG00000020885CSDE19978.042Equus_caballus
ENSAOCG00000011510csde19381.620ENSEEUG00000006286CSDE16881.620Erinaceus_europaeus
ENSAOCG00000011510csde110088.800ENSELUG00000015507csde110088.610Esox_lucius
ENSAOCG00000011510csde110078.052ENSFCAG00000029266CSDE110078.052Felis_catus
ENSAOCG00000011510csde110076.250ENSFALG00000003407CSDE110077.045Ficedula_albicollis
ENSAOCG00000011510csde19976.602ENSFDAG00000007882CSDE110076.602Fukomys_damarensis
ENSAOCG00000011510csde19892.715ENSFHEG00000010799csde19992.715Fundulus_heteroclitus
ENSAOCG00000011510csde19987.343ENSGMOG00000012731csde110088.372Gadus_morhua
ENSAOCG00000011510csde19876.688ENSGALG00000002139CSDE19877.488Gallus_gallus
ENSAOCG00000011510csde19491.908ENSGAFG00000005241csde19591.908Gambusia_affinis
ENSAOCG00000011510csde19991.468ENSGACG00000004544csde110092.525Gasterosteus_aculeatus
ENSAOCG00000011510csde110079.974ENSGAGG00000017685CSDE110077.656Gopherus_agassizii
ENSAOCG00000011510csde110077.792ENSGGOG00000002164CSDE110077.792Gorilla_gorilla
ENSAOCG00000011510csde110093.368ENSHBUG00000020315csde110093.368Haplochromis_burtoni
ENSAOCG00000011510csde19959.950ENSHGLG00000000650-9961.002Heterocephalus_glaber_female
ENSAOCG00000011510csde19667.958ENSHGLG00000008555-10067.958Heterocephalus_glaber_female
ENSAOCG00000011510csde110063.396ENSHGLG00000019549-10063.447Heterocephalus_glaber_female
ENSAOCG00000011510csde19666.667ENSHGLG00000010039-10066.667Heterocephalus_glaber_female
ENSAOCG00000011510csde110069.870ENSHGLG00000003829-10069.870Heterocephalus_glaber_female
ENSAOCG00000011510csde110070.779ENSHGLG00000009620-10070.909Heterocephalus_glaber_female
ENSAOCG00000011510csde19967.628ENSHGLG00000007471-9867.628Heterocephalus_glaber_female
ENSAOCG00000011510csde19963.217ENSHGLG00100002245-9964.190Heterocephalus_glaber_male
ENSAOCG00000011510csde110065.584ENSHGLG00100012072-10065.584Heterocephalus_glaber_male
ENSAOCG00000011510csde19966.448ENSHGLG00100007287-9866.448Heterocephalus_glaber_male
ENSAOCG00000011510csde19666.444ENSHGLG00100006910-10066.444Heterocephalus_glaber_male
ENSAOCG00000011510csde19661.111ENSHGLG00100004833-10061.111Heterocephalus_glaber_male
ENSAOCG00000011510csde110063.377ENSHGLG00100001846-10063.377Heterocephalus_glaber_male
ENSAOCG00000011510csde19365.647ENSHGLG00100004195-10065.647Heterocephalus_glaber_male
ENSAOCG00000011510csde110077.662ENSHGLG00100019438-10077.662Heterocephalus_glaber_male
ENSAOCG00000011510csde110091.417ENSHCOG00000004158csde110091.417Hippocampus_comes
ENSAOCG00000011510csde110086.381ENSIPUG00000000355csde110086.381Ictalurus_punctatus
ENSAOCG00000011510csde19356.830ENSSTOG00000032722-9956.830Ictidomys_tridecemlineatus
ENSAOCG00000011510csde110064.240ENSSTOG00000030994-10064.240Ictidomys_tridecemlineatus
ENSAOCG00000011510csde19976.453ENSJJAG00000019571Csde110076.453Jaculus_jaculus
ENSAOCG00000011510csde110088.279ENSKMAG00000005685csde110089.212Kryptolebias_marmoratus
ENSAOCG00000011510csde110095.052ENSLBEG00000014770csde110095.052Labrus_bergylta
ENSAOCG00000011510csde110074.353ENSLACG00000018452CSDE110071.572Latimeria_chalumnae
ENSAOCG00000011510csde110084.065ENSLOCG00000010413csde110082.778Lepisosteus_oculatus
ENSAOCG00000011510csde110077.273ENSLAFG00000007150CSDE19677.273Loxodonta_africana
ENSAOCG00000011510csde110077.792ENSMFAG00000003674CSDE110077.792Macaca_fascicularis
ENSAOCG00000011510csde110077.792ENSMMUG00000001974CSDE110077.792Macaca_mulatta
ENSAOCG00000011510csde110077.792ENSMNEG00000045247CSDE19777.792Macaca_nemestrina
ENSAOCG00000011510csde110077.532ENSMLEG00000038673CSDE19973.782Mandrillus_leucophaeus
ENSAOCG00000011510csde110095.737ENSMAMG00000008821csde110095.737Mastacembelus_armatus
ENSAOCG00000011510csde110093.368ENSMZEG00005021675csde110093.368Maylandia_zebra
ENSAOCG00000011510csde110079.740ENSMGAG00000016381CSDE110079.740Meleagris_gallopavo
ENSAOCG00000011510csde19976.155ENSMAUG00000014031Csde110076.155Mesocricetus_auratus
ENSAOCG00000011510csde110078.182ENSMICG00000002050CSDE19975.278Microcebus_murinus
ENSAOCG00000011510csde110077.143ENSMOCG00000018960Csde110077.143Microtus_ochrogaster
ENSAOCG00000011510csde110095.969ENSMMOG00000015075csde110095.969Mola_mola
ENSAOCG00000011510csde110078.627ENSMODG00000004685CSDE110077.073Monodelphis_domestica
ENSAOCG00000011510csde110095.319ENSMALG00000007132csde110095.319Monopterus_albus
ENSAOCG00000011510csde110077.273MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSAOCG00000011510csde110077.273ENSMUSG00000068823Csde110084.106Mus_musculus
ENSAOCG00000011510csde110077.273MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSAOCG00000011510csde110077.273MGP_SPRETEiJ_G0026394Csde110084.106Mus_spretus
ENSAOCG00000011510csde19875.159ENSMPUG00000005753CSDE19975.995Mustela_putorius_furo
ENSAOCG00000011510csde110077.532ENSMLUG00000005681CSDE19477.532Myotis_lucifugus
ENSAOCG00000011510csde19652.667ENSNGAG00000012599-10052.667Nannospalax_galili
ENSAOCG00000011510csde19976.304ENSNGAG00000021929Csde110076.304Nannospalax_galili
ENSAOCG00000011510csde110093.368ENSNBRG00000020808csde110093.368Neolamprologus_brichardi
ENSAOCG00000011510csde110077.792ENSNLEG00000004842CSDE19777.792Nomascus_leucogenys
ENSAOCG00000011510csde19385.437ENSMEUG00000002677CSDE19585.437Notamacropus_eugenii
ENSAOCG00000011510csde19483.178ENSOPRG00000005002CSDE18271.739Ochotona_princeps
ENSAOCG00000011510csde19976.453ENSODEG00000007383-10076.453Octodon_degus
ENSAOCG00000011510csde19652.980ENSODEG00000005979-9852.980Octodon_degus
ENSAOCG00000011510csde110087.760ENSONIG00000009309csde110093.635Oreochromis_niloticus
ENSAOCG00000011510csde110079.661ENSOANG00000003346-8279.661Ornithorhynchus_anatinus
ENSAOCG00000011510csde110077.403ENSOCUG00000016438CSDE19973.666Oryctolagus_cuniculus
ENSAOCG00000011510csde110090.885ENSORLG00000000707csde110091.176Oryzias_latipes
ENSAOCG00000011510csde110088.274ENSORLG00020005148csde110091.054Oryzias_latipes_hni
ENSAOCG00000011510csde110090.755ENSORLG00015019415csde110091.054Oryzias_latipes_hsok
ENSAOCG00000011510csde110091.536ENSOMEG00000015656csde110091.789Oryzias_melastigma
ENSAOCG00000011510csde110078.182ENSOGAG00000012127CSDE19478.182Otolemur_garnettii
ENSAOCG00000011510csde110077.532ENSOARG00000020034CSDE19477.532Ovis_aries
ENSAOCG00000011510csde110077.792ENSPPAG00000025861CSDE110077.792Pan_paniscus
ENSAOCG00000011510csde110078.052ENSPPRG00000006747CSDE19874.592Panthera_pardus
ENSAOCG00000011510csde110078.052ENSPTIG00000015468CSDE110075.854Panthera_tigris_altaica
ENSAOCG00000011510csde110077.792ENSPTRG00000033721CSDE110075.610Pan_troglodytes
ENSAOCG00000011510csde110077.792ENSPANG00000018873CSDE110077.792Papio_anubis
ENSAOCG00000011510csde110086.849ENSPKIG00000009459csde110086.849Paramormyrops_kingsleyae
ENSAOCG00000011510csde19677.483ENSPSIG00000003823CSDE19678.814Pelodiscus_sinensis
ENSAOCG00000011510csde110090.637ENSPMGG00000000772csde110090.637Periophthalmus_magnuspinnatus
ENSAOCG00000011510csde19976.453ENSPEMG00000020357-10076.453Peromyscus_maniculatus_bairdii
ENSAOCG00000011510csde110076.280ENSPCIG00000022587CSDE110077.073Phascolarctos_cinereus
ENSAOCG00000011510csde19790.202ENSPFOG00000012664csde110090.824Poecilia_formosa
ENSAOCG00000011510csde19585.561ENSPLAG00000017680csde19385.561Poecilia_latipinna
ENSAOCG00000011510csde19585.714ENSPMEG00000005094csde19585.714Poecilia_mexicana
ENSAOCG00000011510csde110089.988ENSPREG00000011631csde110090.964Poecilia_reticulata
ENSAOCG00000011510csde110074.657ENSPPYG00000000996CSDE110075.488Pongo_abelii
ENSAOCG00000011510csde19684.112ENSPCAG00000014368CSDE19577.445Procavia_capensis
ENSAOCG00000011510csde110078.052ENSPCOG00000017893CSDE110078.052Propithecus_coquereli
ENSAOCG00000011510csde19069.888ENSPCOG00000008223-9269.888Propithecus_coquereli
ENSAOCG00000011510csde110072.727ENSPVAG00000008225CSDE19572.727Pteropus_vampyrus
ENSAOCG00000011510csde110093.368ENSPNYG00000013745csde110093.368Pundamilia_nyererei
ENSAOCG00000011510csde110088.197ENSPNAG00000001958csde110088.197Pygocentrus_nattereri
ENSAOCG00000011510csde110074.157ENSRNOG00000061058Csde110075.000Rattus_norvegicus
ENSAOCG00000011510csde110073.377ENSRBIG00000038966-9969.570Rhinopithecus_bieti
ENSAOCG00000011510csde110074.968ENSRBIG00000038088-10074.968Rhinopithecus_bieti
ENSAOCG00000011510csde110077.792ENSRROG00000043101CSDE19777.792Rhinopithecus_roxellana
ENSAOCG00000011510csde110077.662ENSSBOG00000035592CSDE19973.898Saimiri_boliviensis_boliviensis
ENSAOCG00000011510csde110079.351ENSSHAG00000009831CSDE110079.351Sarcophilus_harrisii
ENSAOCG00000011510csde110095.238ENSSFOG00015007498csde19395.238Scleropages_formosus
ENSAOCG00000011510csde110094.531ENSSMAG00000007203csde110094.531Scophthalmus_maximus
ENSAOCG00000011510csde110096.875ENSSDUG00000015380csde110096.875Seriola_dumerili
ENSAOCG00000011510csde110096.875ENSSLDG00000008819csde110096.875Seriola_lalandi_dorsalis
ENSAOCG00000011510csde110077.403ENSSARG00000000738CSDE19477.403Sorex_araneus
ENSAOCG00000011510csde110080.234ENSSPUG00000008714CSDE110080.234Sphenodon_punctatus
ENSAOCG00000011510csde110097.786ENSSPAG00000000716csde110097.786Stegastes_partitus
ENSAOCG00000011510csde110078.182ENSSSCG00000006752CSDE110078.182Sus_scrofa
ENSAOCG00000011510csde110075.436ENSTGUG00000000972CSDE110076.248Taeniopygia_guttata
ENSAOCG00000011510csde110088.281ENSTRUG00000007996csde110088.281Takifugu_rubripes
ENSAOCG00000011510csde19385.824ENSTNIG00000010878csde110089.286Tetraodon_nigroviridis
ENSAOCG00000011510csde19280.982ENSTBEG00000011880-6080.982Tupaia_belangeri
ENSAOCG00000011510csde110077.273ENSTTRG00000015583CSDE19477.273Tursiops_truncatus
ENSAOCG00000011510csde19281.818ENSUAMG00000021779-9881.818Ursus_americanus
ENSAOCG00000011510csde18773.558ENSUAMG00000024289-9973.558Ursus_americanus
ENSAOCG00000011510csde19271.759ENSUMAG00000011714-9973.460Ursus_maritimus
ENSAOCG00000011510csde110071.558ENSUMAG00000009720-9771.558Ursus_maritimus
ENSAOCG00000011510csde110080.465ENSVPAG00000000749CSDE17980.465Vicugna_pacos
ENSAOCG00000011510csde19373.654ENSVVUG00000009890CSDE19474.646Vulpes_vulpes
ENSAOCG00000011510csde110075.746ENSXETG00000021448csde110076.428Xenopus_tropicalis
ENSAOCG00000011510csde19494.553ENSXCOG00000000035csde18994.553Xiphophorus_couchianus
ENSAOCG00000011510csde19892.308ENSXMAG00000009080csde110091.839Xiphophorus_maculatus

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