EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000011620 (Gene tree)
Gene ID: 111581875
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 4331 bases
Position: chrNXFZ01003772.1:48556-52886
Accession: 111581875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000007777	MRP-S32	PF10210.9	1.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000002239	-	679	XM_023290254	ENSAOCP00000007777	143 (aa)	XP_023146022	UPI000C3179FA

Gene Model

Click here to download ENSAOCG00000011620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000011620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000011620	mrpl42	100	94.444	ENSAPOG00000010677	mrpl42	100	94.444	Acanthochromis_polyacanthus
ENSAOCG00000011620	mrpl42	100	99.301	ENSAPEG00000019516	mrpl42	100	99.301	Amphiprion_percula
ENSAOCG00000011620	mrpl42	90	84.733	ENSATEG00000014106	mrpl42	100	84.733	Anabas_testudineus
ENSAOCG00000011620	mrpl42	76	70.909	ENSACAG00000012606	MRPL42	75	70.909	Anolis_carolinensis
ENSAOCG00000011620	mrpl42	100	80.690	ENSACLG00000026856	mrpl42	100	80.690	Astatotilapia_calliptera
ENSAOCG00000011620	mrpl42	88	51.587	ENSAMXG00000035149	mrpl42	85	51.587	Astyanax_mexicanus
ENSAOCG00000011620	mrpl42	99	71.631	ENSCSEG00000010067	mrpl42	98	71.631	Cynoglossus_semilaevis
ENSAOCG00000011620	mrpl42	100	77.241	ENSCVAG00000002612	mrpl42	100	77.241	Cyprinodon_variegatus
ENSAOCG00000011620	mrpl42	100	58.621	ENSDARG00000079391	mrpl42	100	58.621	Danio_rerio
ENSAOCG00000011620	mrpl42	78	47.899	ENSEBUG00000005581	mrpl42	89	47.899	Eptatretus_burgeri
ENSAOCG00000011620	mrpl42	99	69.444	ENSELUG00000001973	mrpl42	99	69.444	Esox_lucius
ENSAOCG00000011620	mrpl42	100	75.862	ENSFHEG00000018696	mrpl42	100	75.862	Fundulus_heteroclitus
ENSAOCG00000011620	mrpl42	67	80.208	ENSGMOG00000002972	mrpl42	99	80.208	Gadus_morhua
ENSAOCG00000011620	mrpl42	100	77.241	ENSGAFG00000018373	mrpl42	100	77.241	Gambusia_affinis
ENSAOCG00000011620	mrpl42	68	85.567	ENSGACG00000018811	mrpl42	100	85.567	Gasterosteus_aculeatus
ENSAOCG00000011620	mrpl42	100	80.690	ENSHBUG00000015960	mrpl42	100	80.690	Haplochromis_burtoni
ENSAOCG00000011620	mrpl42	100	67.586	ENSHCOG00000014046	mrpl42	100	67.586	Hippocampus_comes
ENSAOCG00000011620	mrpl42	71	62.376	ENSIPUG00000015395	mrpl42	69	62.376	Ictalurus_punctatus
ENSAOCG00000011620	mrpl42	100	75.524	ENSKMAG00000013671	mrpl42	100	75.524	Kryptolebias_marmoratus
ENSAOCG00000011620	mrpl42	100	79.310	ENSLBEG00000028618	mrpl42	99	79.310	Labrus_bergylta
ENSAOCG00000011620	mrpl42	50	76.389	ENSLOCG00000015284	mrpl42	57	76.389	Lepisosteus_oculatus
ENSAOCG00000011620	mrpl42	100	81.119	ENSMAMG00000009737	mrpl42	100	81.119	Mastacembelus_armatus
ENSAOCG00000011620	mrpl42	100	80.690	ENSMZEG00005008545	mrpl42	96	80.690	Maylandia_zebra
ENSAOCG00000011620	mrpl42	80	69.167	ENSMMOG00000002317	mrpl42	79	69.167	Mola_mola
ENSAOCG00000011620	mrpl42	100	70.323	ENSMALG00000015794	mrpl42	96	70.323	Monopterus_albus
ENSAOCG00000011620	mrpl42	100	80.000	ENSNBRG00000003307	mrpl42	100	80.000	Neolamprologus_brichardi
ENSAOCG00000011620	mrpl42	100	80.690	ENSONIG00000011753	mrpl42	100	80.690	Oreochromis_niloticus
ENSAOCG00000011620	mrpl42	93	52.985	ENSOANG00000019984	-	86	52.985	Ornithorhynchus_anatinus
ENSAOCG00000011620	mrpl42	100	71.918	ENSORLG00000013500	mrpl42	85	71.918	Oryzias_latipes
ENSAOCG00000011620	mrpl42	100	73.973	ENSORLG00020000548	mrpl42	100	73.973	Oryzias_latipes_hni
ENSAOCG00000011620	mrpl42	100	72.414	ENSORLG00015016984	mrpl42	100	72.414	Oryzias_latipes_hsok
ENSAOCG00000011620	mrpl42	100	74.483	ENSOMEG00000010700	mrpl42	100	74.483	Oryzias_melastigma
ENSAOCG00000011620	mrpl42	100	63.699	ENSPKIG00000025457	mrpl42	100	63.699	Paramormyrops_kingsleyae
ENSAOCG00000011620	mrpl42	94	61.940	ENSPMGG00000019705	mrpl42	91	61.940	Periophthalmus_magnuspinnatus
ENSAOCG00000011620	mrpl42	76	57.522	ENSPMAG00000008091	mrpl42	73	57.522	Petromyzon_marinus
ENSAOCG00000011620	mrpl42	100	77.241	ENSPFOG00000016539	mrpl42	99	77.241	Poecilia_formosa
ENSAOCG00000011620	mrpl42	100	76.552	ENSPLAG00000001255	mrpl42	100	76.552	Poecilia_latipinna
ENSAOCG00000011620	mrpl42	100	77.241	ENSPMEG00000016462	mrpl42	100	77.241	Poecilia_mexicana
ENSAOCG00000011620	mrpl42	94	66.912	ENSPREG00000012053	mrpl42	100	66.912	Poecilia_reticulata
ENSAOCG00000011620	mrpl42	100	80.690	ENSPNYG00000009586	mrpl42	100	80.690	Pundamilia_nyererei
ENSAOCG00000011620	mrpl42	71	67.327	ENSPNAG00000020753	mrpl42	97	54.483	Pygocentrus_nattereri
ENSAOCG00000011620	mrpl42	100	82.069	ENSSMAG00000000262	mrpl42	100	82.069	Scophthalmus_maximus
ENSAOCG00000011620	mrpl42	100	82.759	ENSSDUG00000005949	mrpl42	100	82.759	Seriola_dumerili
ENSAOCG00000011620	mrpl42	100	82.759	ENSSLDG00000010159	mrpl42	100	82.759	Seriola_lalandi_dorsalis
ENSAOCG00000011620	mrpl42	100	75.172	ENSTRUG00000025949	mrpl42	99	75.172	Takifugu_rubripes
ENSAOCG00000011620	mrpl42	79	63.158	ENSXETG00000032902	mrpl42	92	63.158	Xenopus_tropicalis
ENSAOCG00000011620	mrpl42	100	71.329	ENSXCOG00000013875	mrpl42	98	71.329	Xiphophorus_couchianus