EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000011621 (Gene tree)
Gene ID: 111573476
Gene Symbol: -
Alias: -
Full Name: intracellular hyaluronan-binding protein 4-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 8590 bases
Position: chrNXFZ01002919.1:451325-459914
Accession: 111573476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000007759	HABP4_PAI-RBP1	PF04774.15	6.5e-25	1	1
ENSAOCP00000007779	HABP4_PAI-RBP1	PF04774.15	6.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000002241	-	1327	XM_023277664	ENSAOCP00000007779	372 (aa)	XP_023133432	UPI000C303F65
ENSAOCT00000002260	-	1490	XM_023277665	ENSAOCP00000007759	368 (aa)	XP_023133433	UPI000C3175CB

Gene Model

Click here to download ENSAOCG00000011621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000011621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000011621	-	56	39.407	ENSAOCG00000001792	serbp1b	89	36.562
ENSAOCG00000011621	-	98	35.468	ENSAOCG00000002731	serbp1a	99	37.157

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000011621	-	100	87.772	ENSAPOG00000018926	-	100	89.402	Acanthochromis_polyacanthus
ENSAOCG00000011621	-	100	99.185	ENSAPEG00000006355	-	100	99.185	Amphiprion_percula
ENSAOCG00000011621	-	99	44.709	ENSAMXG00000000297	-	96	45.312	Astyanax_mexicanus
ENSAOCG00000011621	-	100	63.852	ENSCSEG00000017753	-	100	62.169	Cynoglossus_semilaevis
ENSAOCG00000011621	-	97	53.826	ENSGAFG00000012163	-	99	52.219	Gambusia_affinis
ENSAOCG00000011621	-	100	72.973	ENSMAMG00000020735	-	99	73.262	Mastacembelus_armatus
ENSAOCG00000011621	-	57	46.087	ENSMODG00000000514	-	52	40.870	Monodelphis_domestica
ENSAOCG00000011621	-	99	48.641	ENSPMGG00000017136	-	99	47.826	Periophthalmus_magnuspinnatus
ENSAOCG00000011621	-	100	71.925	ENSSMAG00000003212	-	100	71.123	Scophthalmus_maximus
ENSAOCG00000011621	-	100	76.115	ENSSDUG00000002625	-	100	75.591	Seriola_dumerili
ENSAOCG00000011621	-	73	76.779	ENSSLDG00000019167	-	96	77.470	Seriola_lalandi_dorsalis
ENSAOCG00000011621	-	100	81.351	ENSSPAG00000009182	-	100	82.432	Stegastes_partitus
ENSAOCG00000011621	-	100	63.073	ENSTRUG00000015277	IHABP	100	62.264	Takifugu_rubripes
ENSAOCG00000011621	-	99	36.520	ENSTTRG00000005786	-	51	42.105	Tursiops_truncatus