EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000011672 (Gene tree)
Gene ID: 111586243
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 7681 bases
Position: chrNXFZ01004801.1:17399-25079
Accession: 111586243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000007800	RRM_1	PF00076.22	1.5e-19	1	1
ENSAOCP00000024646	RRM_1	PF00076.22	7.1e-09	1	1
ENSAOCP00000024646	U1snRNP70_N	PF12220.8	3.6e-25	1	1
ENSAOCP00000007800	U1snRNP70_N	PF12220.8	4.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000002201	-	1745	XM_023295939	ENSAOCP00000007800	475 (aa)	XP_023151707	UPI000C31449F
ENSAOCT00000002232	-	1272	-	ENSAOCP00000024646	423 (aa)	-	-

Gene Model

Click here to download ENSAOCG00000011672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000011672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000011672	snrnp70	50	83.482	ENSG00000104852	SNRNP70	99	89.634	Homo_sapiens
ENSAOCG00000011672	snrnp70	50	79.556	ENSAMEG00000014468	SNRNP70	51	88.393	Ailuropoda_melanoleuca
ENSAOCG00000011672	snrnp70	100	89.053	ENSACIG00000017909	snrnp70	100	88.421	Amphilophus_citrinellus
ENSAOCG00000011672	snrnp70	100	98.947	ENSAPEG00000006219	snrnp70	100	98.947	Amphiprion_percula
ENSAOCG00000011672	snrnp70	50	83.482	ENSANAG00000036787	SNRNP70	99	89.634	Aotus_nancymaae
ENSAOCG00000011672	snrnp70	60	44.366	WBGene00004390	rnp-7	57	51.579	Caenorhabditis_elegans
ENSAOCG00000011672	snrnp70	50	83.482	ENSCJAG00000000193	SNRNP70	99	89.634	Callithrix_jacchus
ENSAOCG00000011672	snrnp70	50	83.482	ENSCAFG00000003711	SNRNP70	99	89.634	Canis_familiaris
ENSAOCG00000011672	snrnp70	50	82.743	ENSCAFG00020025470	SNRNP70	99	85.542	Canis_lupus_dingo
ENSAOCG00000011672	snrnp70	50	83.482	ENSCPOG00000019589	SNRNP70	51	92.825	Cavia_porcellus
ENSAOCG00000011672	snrnp70	50	83.482	ENSCATG00000016149	SNRNP70	51	92.825	Cercocebus_atys
ENSAOCG00000011672	snrnp70	50	83.482	ENSCLAG00000007991	SNRNP70	51	92.825	Chinchilla_lanigera
ENSAOCG00000011672	snrnp70	50	83.482	ENSCANG00000036607	SNRNP70	90	92.825	Colobus_angolensis_palliatus
ENSAOCG00000011672	snrnp70	50	83.482	ENSCGRG00001020676	Snrnp70	50	92.825	Cricetulus_griseus_chok1gshd
ENSAOCG00000011672	snrnp70	50	83.482	ENSCGRG00000018048	Snrnp70	50	92.825	Cricetulus_griseus_crigri
ENSAOCG00000011672	snrnp70	50	86.547	ENSCSEG00000011978	snrnp70	99	96.875	Cynoglossus_semilaevis
ENSAOCG00000011672	snrnp70	50	84.305	ENSDARG00000077126	snrnp70	99	95.031	Danio_rerio
ENSAOCG00000011672	snrnp70	50	83.482	ENSDORG00000010228	Snrnp70	50	92.825	Dipodomys_ordii
ENSAOCG00000011672	snrnp70	50	83.482	ENSEASG00005004917	SNRNP70	51	92.825	Equus_asinus_asinus
ENSAOCG00000011672	snrnp70	50	62.054	ENSEEUG00000005666	SNRNP70	51	71.300	Erinaceus_europaeus
ENSAOCG00000011672	snrnp70	50	83.929	ENSFCAG00000042603	SNRNP70	53	92.825	Felis_catus
ENSAOCG00000011672	snrnp70	50	83.482	ENSFDAG00000013830	SNRNP70	95	90.244	Fukomys_damarensis
ENSAOCG00000011672	snrnp70	50	88.341	ENSGACG00000000448	snrnp70	70	98.661	Gasterosteus_aculeatus
ENSAOCG00000011672	snrnp70	50	83.482	ENSGGOG00000008245	SNRNP70	99	89.634	Gorilla_gorilla
ENSAOCG00000011672	snrnp70	50	83.482	ENSJJAG00000002614	Snrnp70	50	92.825	Jaculus_jaculus
ENSAOCG00000011672	snrnp70	50	83.482	ENSLAFG00000028536	SNRNP70	97	92.825	Loxodonta_africana
ENSAOCG00000011672	snrnp70	50	83.482	ENSMFAG00000039824	SNRNP70	51	92.825	Macaca_fascicularis
ENSAOCG00000011672	snrnp70	50	68.750	ENSMMUG00000004928	SNRNP70	99	89.634	Macaca_mulatta
ENSAOCG00000011672	snrnp70	50	83.482	ENSMNEG00000038057	SNRNP70	52	92.825	Macaca_nemestrina
ENSAOCG00000011672	snrnp70	50	83.482	ENSMLEG00000030967	SNRNP70	51	92.825	Mandrillus_leucophaeus
ENSAOCG00000011672	snrnp70	100	86.611	ENSMAMG00000004556	snrnp70	100	86.402	Mastacembelus_armatus
ENSAOCG00000011672	snrnp70	50	83.482	ENSMAUG00000020970	Snrnp70	50	92.825	Mesocricetus_auratus
ENSAOCG00000011672	snrnp70	50	83.929	ENSMICG00000038437	SNRNP70	99	89.634	Microcebus_murinus
ENSAOCG00000011672	snrnp70	56	82.707	ENSMOCG00000012825	Snrnp70	50	92.825	Microtus_ochrogaster
ENSAOCG00000011672	snrnp70	50	83.482	MGP_CAROLIEiJ_G0029714	Snrnp70	100	91.743	Mus_caroli
ENSAOCG00000011672	snrnp70	50	83.482	ENSMUSG00000063511	Snrnp70	100	91.743	Mus_musculus
ENSAOCG00000011672	snrnp70	56	82.707	MGP_PahariEiJ_G0012939	Snrnp70	100	91.743	Mus_pahari
ENSAOCG00000011672	snrnp70	50	83.482	MGP_SPRETEiJ_G0030812	Snrnp70	100	91.743	Mus_spretus
ENSAOCG00000011672	snrnp70	50	83.482	ENSMPUG00000003258	SNRNP70	51	92.825	Mustela_putorius_furo
ENSAOCG00000011672	snrnp70	50	83.929	ENSMLUG00000011766	SNRNP70	51	92.825	Myotis_lucifugus
ENSAOCG00000011672	snrnp70	50	83.482	ENSNGAG00000021191	Snrnp70	95	90.244	Nannospalax_galili
ENSAOCG00000011672	snrnp70	50	87.892	ENSNBRG00000003126	snrnp70	97	98.673	Neolamprologus_brichardi
ENSAOCG00000011672	snrnp70	50	87.444	ENSONIG00000007822	snrnp70	52	98.214	Oreochromis_niloticus
ENSAOCG00000011672	snrnp70	51	81.304	ENSOANG00000005213	SNRNP70	97	92.342	Ornithorhynchus_anatinus
ENSAOCG00000011672	snrnp70	100	84.421	ENSOMEG00000013002	snrnp70	100	84.421	Oryzias_melastigma
ENSAOCG00000011672	snrnp70	50	83.111	ENSOGAG00000029310	SNRNP70	51	90.625	Otolemur_garnettii
ENSAOCG00000011672	snrnp70	50	83.408	ENSOARG00000012608	SNRNP70	60	92.793	Ovis_aries
ENSAOCG00000011672	snrnp70	60	75.564	ENSPPAG00000035067	SNRNP70	99	89.634	Pan_paniscus
ENSAOCG00000011672	snrnp70	50	83.482	ENSPPRG00000005579	SNRNP70	51	92.825	Panthera_pardus
ENSAOCG00000011672	snrnp70	50	83.482	ENSPTRG00000011277	SNRNP70	99	89.634	Pan_troglodytes
ENSAOCG00000011672	snrnp70	50	83.482	ENSPANG00000004068	SNRNP70	51	92.825	Papio_anubis
ENSAOCG00000011672	snrnp70	53	72.941	ENSPSIG00000015251	SNRNP70	98	76.305	Pelodiscus_sinensis
ENSAOCG00000011672	snrnp70	50	83.482	ENSPEMG00000019011	Snrnp70	50	92.825	Peromyscus_maniculatus_bairdii
ENSAOCG00000011672	snrnp70	50	83.036	ENSPPYG00000010234	SNRNP70	51	92.377	Pongo_abelii
ENSAOCG00000011672	snrnp70	50	78.776	ENSPCOG00000023103	SNRNP70	87	78.776	Propithecus_coquereli
ENSAOCG00000011672	snrnp70	50	78.125	ENSPVAG00000009578	SNRNP70	51	86.547	Pteropus_vampyrus
ENSAOCG00000011672	snrnp70	50	83.482	ENSRBIG00000042387	SNRNP70	83	92.825	Rhinopithecus_bieti
ENSAOCG00000011672	snrnp70	50	83.482	ENSRROG00000033636	SNRNP70	83	92.825	Rhinopithecus_roxellana
ENSAOCG00000011672	snrnp70	50	83.482	ENSSBOG00000020026	SNRNP70	99	89.634	Saimiri_boliviensis_boliviensis
ENSAOCG00000011672	snrnp70	84	88.341	ENSSLDG00000009459	snrnp70	76	88.341	Seriola_lalandi_dorsalis
ENSAOCG00000011672	snrnp70	51	88.000	ENSSPUG00000016621	SNRNP70	52	94.144	Sphenodon_punctatus
ENSAOCG00000011672	snrnp70	84	90.345	ENSSPAG00000009563	snrnp70	75	90.345	Stegastes_partitus
ENSAOCG00000011672	snrnp70	50	83.482	ENSTTRG00000017099	SNRNP70	51	92.825	Tursiops_truncatus
ENSAOCG00000011672	snrnp70	50	83.482	ENSUAMG00000016147	SNRNP70	51	92.825	Ursus_americanus
ENSAOCG00000011672	snrnp70	50	83.482	ENSUMAG00000001467	SNRNP70	99	89.634	Ursus_maritimus
ENSAOCG00000011672	snrnp70	50	83.482	ENSVVUG00000022976	SNRNP70	99	89.634	Vulpes_vulpes
ENSAOCG00000011672	snrnp70	50	82.063	ENSXETG00000022919	snrnp70	56	91.441	Xenopus_tropicalis