EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000011687 (Gene tree)
Gene ID: 111563653
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 16443 bases
Position: chrNXFZ01006268.1:298765-315207
Accession: 111563653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000024666	RNA_pol_A_bac	PF01000.26	1.8e-30	1	1
ENSAOCP00000024666	RNA_pol_L	PF01193.24	2.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000002183	-	1373	XM_023262823	ENSAOCP00000024666	362 (aa)	XP_023118591	UPI000C30532B

Gene Model

Click here to download ENSAOCG00000011687's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000011687's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000011687	polr1c	97	71.510	ENSG00000171453	POLR1C	100	72.203	Homo_sapiens
ENSAOCG00000011687	polr1c	97	96.011	ENSAPOG00000024356	polr1c	100	96.011	Acanthochromis_polyacanthus
ENSAOCG00000011687	polr1c	98	71.955	ENSAMEG00000012205	POLR1C	100	71.671	Ailuropoda_melanoleuca
ENSAOCG00000011687	polr1c	91	77.744	ENSACIG00000016268	polr1c	90	77.744	Amphilophus_citrinellus
ENSAOCG00000011687	polr1c	97	99.145	ENSAPEG00000002433	polr1c	100	99.145	Amphiprion_percula
ENSAOCG00000011687	polr1c	96	89.685	ENSATEG00000005985	polr1c	99	89.685	Anabas_testudineus
ENSAOCG00000011687	polr1c	80	72.759	ENSAPLG00000002908	POLR1C	100	69.737	Anas_platyrhynchos
ENSAOCG00000011687	polr1c	87	71.835	ENSACAG00000009764	POLR1C	89	71.519	Anolis_carolinensis
ENSAOCG00000011687	polr1c	98	70.904	ENSANAG00000025805	POLR1C	100	70.423	Aotus_nancymaae
ENSAOCG00000011687	polr1c	97	89.174	ENSACLG00000006573	polr1c	100	89.174	Astatotilapia_calliptera
ENSAOCG00000011687	polr1c	97	80.912	ENSAMXG00000012062	polr1c	99	80.342	Astyanax_mexicanus
ENSAOCG00000011687	polr1c	96	71.920	ENSBTAG00000018969	POLR1C	99	71.633	Bos_taurus
ENSAOCG00000011687	polr1c	96	45.730	WBGene00019275	rpac-40	98	45.179	Caenorhabditis_elegans
ENSAOCG00000011687	polr1c	97	70.940	ENSCJAG00000005594	POLR1C	100	70.655	Callithrix_jacchus
ENSAOCG00000011687	polr1c	96	71.633	ENSCAFG00000001872	POLR1C	99	71.347	Canis_familiaris
ENSAOCG00000011687	polr1c	96	71.633	ENSCAFG00020012018	POLR1C	99	71.347	Canis_lupus_dingo
ENSAOCG00000011687	polr1c	60	30.396	ENSCAFG00020007660	POLR2C	62	30.396	Canis_lupus_dingo
ENSAOCG00000011687	polr1c	96	71.633	ENSCHIG00000004352	POLR1C	99	71.060	Capra_hircus
ENSAOCG00000011687	polr1c	98	71.469	ENSTSYG00000011921	POLR1C	99	71.347	Carlito_syrichta
ENSAOCG00000011687	polr1c	83	72.185	ENSCAPG00000015364	POLR1C	87	71.854	Cavia_aperea
ENSAOCG00000011687	polr1c	97	72.080	ENSCPOG00000038098	POLR1C	100	71.795	Cavia_porcellus
ENSAOCG00000011687	polr1c	99	70.308	ENSCCAG00000020169	POLR1C	99	70.774	Cebus_capucinus
ENSAOCG00000011687	polr1c	98	70.986	ENSCATG00000044045	POLR1C	100	71.225	Cercocebus_atys
ENSAOCG00000011687	polr1c	97	72.080	ENSCLAG00000009266	POLR1C	100	71.795	Chinchilla_lanigera
ENSAOCG00000011687	polr1c	60	30.396	ENSCLAG00000013676	POLR2C	54	30.396	Chinchilla_lanigera
ENSAOCG00000011687	polr1c	97	70.940	ENSCSAG00000011913	POLR1C	100	70.655	Chlorocebus_sabaeus
ENSAOCG00000011687	polr1c	59	68.396	ENSCHOG00000006601	POLR1C	100	68.396	Choloepus_hoffmanni
ENSAOCG00000011687	polr1c	96	72.493	ENSCPBG00000025203	POLR1C	99	72.206	Chrysemys_picta_bellii
ENSAOCG00000011687	polr1c	96	54.728	ENSCING00000003563	-	99	54.728	Ciona_intestinalis
ENSAOCG00000011687	polr1c	98	70.986	ENSCANG00000043167	POLR1C	100	71.225	Colobus_angolensis_palliatus
ENSAOCG00000011687	polr1c	96	71.060	ENSCGRG00001017533	Polr1c	99	70.487	Cricetulus_griseus_chok1gshd
ENSAOCG00000011687	polr1c	83	71.192	ENSCGRG00000013225	Polr1c	99	70.530	Cricetulus_griseus_crigri
ENSAOCG00000011687	polr1c	97	83.191	ENSCSEG00000018097	polr1c	100	82.621	Cynoglossus_semilaevis
ENSAOCG00000011687	polr1c	59	88.208	ENSCVAG00000005684	polr1c	85	88.208	Cyprinodon_variegatus
ENSAOCG00000011687	polr1c	100	77.624	ENSDARG00000039400	polr1c	99	76.796	Danio_rerio
ENSAOCG00000011687	polr1c	97	72.080	ENSDNOG00000042693	POLR1C	100	71.795	Dasypus_novemcinctus
ENSAOCG00000011687	polr1c	96	72.206	ENSDORG00000000429	Polr1c	99	71.920	Dipodomys_ordii
ENSAOCG00000011687	polr1c	92	51.952	FBgn0031657	CG3756	97	50.751	Drosophila_melanogaster
ENSAOCG00000011687	polr1c	96	68.481	ENSETEG00000010807	POLR1C	99	68.481	Echinops_telfairi
ENSAOCG00000011687	polr1c	95	67.826	ENSEBUG00000013725	polr1c	99	67.147	Eptatretus_burgeri
ENSAOCG00000011687	polr1c	96	71.347	ENSEASG00005003338	POLR1C	99	71.060	Equus_asinus_asinus
ENSAOCG00000011687	polr1c	98	71.388	ENSECAG00000023516	POLR1C	99	71.105	Equus_caballus
ENSAOCG00000011687	polr1c	96	72.493	ENSEEUG00000005471	POLR1C	99	72.206	Erinaceus_europaeus
ENSAOCG00000011687	polr1c	97	79.487	ENSELUG00000013027	polr1c	100	78.917	Esox_lucius
ENSAOCG00000011687	polr1c	96	72.493	ENSFCAG00000009735	POLR1C	99	72.206	Felis_catus
ENSAOCG00000011687	polr1c	90	70.336	ENSFALG00000012111	POLR1C	100	70.031	Ficedula_albicollis
ENSAOCG00000011687	polr1c	96	71.633	ENSFDAG00000008428	POLR1C	99	71.347	Fukomys_damarensis
ENSAOCG00000011687	polr1c	97	72.365	ENSFHEG00000000262	polr1c	100	72.934	Fundulus_heteroclitus
ENSAOCG00000011687	polr1c	90	79.573	ENSGMOG00000013878	polr1c	100	79.268	Gadus_morhua
ENSAOCG00000011687	polr1c	96	70.201	ENSGALG00000010349	POLR1C	99	69.914	Gallus_gallus
ENSAOCG00000011687	polr1c	97	86.895	ENSGAFG00000010153	polr1c	100	86.895	Gambusia_affinis
ENSAOCG00000011687	polr1c	97	84.615	ENSGACG00000002453	polr1c	100	84.615	Gasterosteus_aculeatus
ENSAOCG00000011687	polr1c	95	72.754	ENSGAGG00000010640	POLR1C	99	72.464	Gopherus_agassizii
ENSAOCG00000011687	polr1c	98	70.986	ENSGGOG00000010903	POLR1C	100	71.225	Gorilla_gorilla
ENSAOCG00000011687	polr1c	97	80.342	ENSHBUG00000017816	polr1c	100	79.487	Haplochromis_burtoni
ENSAOCG00000011687	polr1c	96	71.060	ENSHGLG00000019441	POLR1C	99	70.774	Heterocephalus_glaber_female
ENSAOCG00000011687	polr1c	96	71.347	ENSHGLG00100005970	POLR1C	99	71.060	Heterocephalus_glaber_male
ENSAOCG00000011687	polr1c	96	81.556	ENSHCOG00000002179	polr1c	99	81.556	Hippocampus_comes
ENSAOCG00000011687	polr1c	96	79.370	ENSIPUG00000024464	polr1c	99	78.797	Ictalurus_punctatus
ENSAOCG00000011687	polr1c	96	71.633	ENSSTOG00000010631	POLR1C	99	71.347	Ictidomys_tridecemlineatus
ENSAOCG00000011687	polr1c	60	30.396	ENSSTOG00000015150	-	51	30.396	Ictidomys_tridecemlineatus
ENSAOCG00000011687	polr1c	96	71.920	ENSJJAG00000023110	Polr1c	99	71.633	Jaculus_jaculus
ENSAOCG00000011687	polr1c	98	85.028	ENSKMAG00000014305	polr1c	98	85.028	Kryptolebias_marmoratus
ENSAOCG00000011687	polr1c	97	89.744	ENSLBEG00000014925	polr1c	100	89.744	Labrus_bergylta
ENSAOCG00000011687	polr1c	92	57.143	ENSLACG00000012567	POLR1C	98	56.548	Latimeria_chalumnae
ENSAOCG00000011687	polr1c	97	78.409	ENSLOCG00000016710	polr1c	96	77.620	Lepisosteus_oculatus
ENSAOCG00000011687	polr1c	60	30.396	ENSLAFG00000027230	POLR2C	77	30.396	Loxodonta_africana
ENSAOCG00000011687	polr1c	84	72.131	ENSLAFG00000026248	POLR1C	100	72.131	Loxodonta_africana
ENSAOCG00000011687	polr1c	98	70.704	ENSMFAG00000046295	POLR1C	100	70.940	Macaca_fascicularis
ENSAOCG00000011687	polr1c	97	71.225	ENSMMUG00000015192	POLR1C	100	70.940	Macaca_mulatta
ENSAOCG00000011687	polr1c	98	70.704	ENSMNEG00000028073	POLR1C	100	70.940	Macaca_nemestrina
ENSAOCG00000011687	polr1c	98	70.704	ENSMLEG00000034818	POLR1C	100	70.940	Mandrillus_leucophaeus
ENSAOCG00000011687	polr1c	97	88.889	ENSMAMG00000008700	polr1c	100	88.889	Mastacembelus_armatus
ENSAOCG00000011687	polr1c	97	88.889	ENSMZEG00005018545	polr1c	100	88.889	Maylandia_zebra
ENSAOCG00000011687	polr1c	81	67.458	ENSMGAG00000011020	POLR1C	100	67.119	Meleagris_gallopavo
ENSAOCG00000011687	polr1c	56	30.144	ENSMAUG00000019031	-	74	30.144	Mesocricetus_auratus
ENSAOCG00000011687	polr1c	96	71.347	ENSMAUG00000014329	Polr1c	99	71.060	Mesocricetus_auratus
ENSAOCG00000011687	polr1c	98	69.972	ENSMICG00000005027	POLR1C	99	70.096	Microcebus_murinus
ENSAOCG00000011687	polr1c	96	71.347	ENSMOCG00000017549	Polr1c	99	71.060	Microtus_ochrogaster
ENSAOCG00000011687	polr1c	97	71.143	ENSMMOG00000005380	polr1c	99	71.714	Mola_mola
ENSAOCG00000011687	polr1c	81	74.576	ENSMODG00000018964	POLR1C	100	74.237	Monodelphis_domestica
ENSAOCG00000011687	polr1c	97	73.504	ENSMALG00000011711	polr1c	100	73.789	Monopterus_albus
ENSAOCG00000011687	polr1c	96	63.897	MGP_CAROLIEiJ_G0021662	Polr1c	100	70.455	Mus_caroli
ENSAOCG00000011687	polr1c	96	71.920	ENSMUSG00000067148	Polr1c	98	73.267	Mus_musculus
ENSAOCG00000011687	polr1c	96	72.493	MGP_PahariEiJ_G0020654	Polr1c	100	71.970	Mus_pahari
ENSAOCG00000011687	polr1c	96	71.920	MGP_SPRETEiJ_G0022574	Polr1c	98	73.267	Mus_spretus
ENSAOCG00000011687	polr1c	98	72.521	ENSMPUG00000012916	POLR1C	92	72.238	Mustela_putorius_furo
ENSAOCG00000011687	polr1c	97	71.875	ENSMLUG00000017751	POLR1C	100	71.591	Myotis_lucifugus
ENSAOCG00000011687	polr1c	96	71.633	ENSNGAG00000023487	Polr1c	100	72.881	Nannospalax_galili
ENSAOCG00000011687	polr1c	97	89.174	ENSNBRG00000018742	polr1c	100	89.174	Neolamprologus_brichardi
ENSAOCG00000011687	polr1c	98	70.255	ENSNLEG00000004035	POLR1C	100	70.940	Nomascus_leucogenys
ENSAOCG00000011687	polr1c	97	62.393	ENSMEUG00000006778	POLR1C	100	62.108	Notamacropus_eugenii
ENSAOCG00000011687	polr1c	75	70.370	ENSOPRG00000000145	POLR1C	99	70.000	Ochotona_princeps
ENSAOCG00000011687	polr1c	97	71.795	ENSODEG00000015831	-	100	71.510	Octodon_degus
ENSAOCG00000011687	polr1c	60	68.493	ENSODEG00000017109	-	97	68.868	Octodon_degus
ENSAOCG00000011687	polr1c	99	89.106	ENSONIG00000013133	polr1c	100	89.106	Oreochromis_niloticus
ENSAOCG00000011687	polr1c	96	69.628	ENSOANG00000003043	POLR1C	99	69.341	Ornithorhynchus_anatinus
ENSAOCG00000011687	polr1c	97	70.739	ENSOCUG00000005504	POLR1C	100	70.455	Oryctolagus_cuniculus
ENSAOCG00000011687	polr1c	96	82.759	ENSORLG00000019743	polr1c	99	82.759	Oryzias_latipes
ENSAOCG00000011687	polr1c	74	65.693	ENSORLG00020005555	polr1c	81	65.217	Oryzias_latipes_hni
ENSAOCG00000011687	polr1c	96	83.621	ENSORLG00020006489	POLR1C	99	83.621	Oryzias_latipes_hni
ENSAOCG00000011687	polr1c	96	83.046	ENSORLG00015013322	polr1c	99	83.046	Oryzias_latipes_hsok
ENSAOCG00000011687	polr1c	95	84.928	ENSOMEG00000016527	polr1c	98	84.928	Oryzias_melastigma
ENSAOCG00000011687	polr1c	96	70.774	ENSOGAG00000016318	POLR1C	99	70.201	Otolemur_garnettii
ENSAOCG00000011687	polr1c	96	71.347	ENSOARG00000007503	POLR1C	99	71.060	Ovis_aries
ENSAOCG00000011687	polr1c	98	70.986	ENSPPAG00000043678	POLR1C	100	71.225	Pan_paniscus
ENSAOCG00000011687	polr1c	96	72.493	ENSPPRG00000009760	POLR1C	99	72.206	Panthera_pardus
ENSAOCG00000011687	polr1c	96	72.493	ENSPTIG00000014813	POLR1C	99	72.206	Panthera_tigris_altaica
ENSAOCG00000011687	polr1c	98	70.986	ENSPTRG00000018202	POLR1C	100	71.225	Pan_troglodytes
ENSAOCG00000011687	polr1c	98	70.986	ENSPANG00000009025	POLR1C	100	70.704	Papio_anubis
ENSAOCG00000011687	polr1c	97	80.342	ENSPKIG00000009858	polr1c	100	79.772	Paramormyrops_kingsleyae
ENSAOCG00000011687	polr1c	99	70.083	ENSPSIG00000012580	POLR1C	96	70.083	Pelodiscus_sinensis
ENSAOCG00000011687	polr1c	97	70.940	ENSPMGG00000012121	polr1c	100	71.225	Periophthalmus_magnuspinnatus
ENSAOCG00000011687	polr1c	96	71.920	ENSPEMG00000006970	Polr1c	99	71.347	Peromyscus_maniculatus_bairdii
ENSAOCG00000011687	polr1c	97	69.492	ENSPMAG00000005560	polr1c	100	68.927	Petromyzon_marinus
ENSAOCG00000011687	polr1c	60	30.594	ENSPMAG00000004827	polr2c	91	30.594	Petromyzon_marinus
ENSAOCG00000011687	polr1c	97	73.580	ENSPCIG00000028137	POLR1C	99	73.295	Phascolarctos_cinereus
ENSAOCG00000011687	polr1c	99	86.275	ENSPFOG00000014357	polr1c	100	86.275	Poecilia_formosa
ENSAOCG00000011687	polr1c	97	86.610	ENSPFOG00000014342	POLR1C	100	86.610	Poecilia_formosa
ENSAOCG00000011687	polr1c	59	87.264	ENSPLAG00000004111	polr1c	88	87.264	Poecilia_latipinna
ENSAOCG00000011687	polr1c	97	86.610	ENSPMEG00000008420	polr1c	100	86.610	Poecilia_mexicana
ENSAOCG00000011687	polr1c	97	86.610	ENSPMEG00000011877	-	100	86.610	Poecilia_mexicana
ENSAOCG00000011687	polr1c	97	85.470	ENSPREG00000007985	polr1c	100	85.470	Poecilia_reticulata
ENSAOCG00000011687	polr1c	97	71.225	ENSPPYG00000016645	POLR1C	100	70.940	Pongo_abelii
ENSAOCG00000011687	polr1c	96	69.914	ENSPCOG00000024628	POLR1C	99	69.628	Propithecus_coquereli
ENSAOCG00000011687	polr1c	96	66.189	ENSPVAG00000005689	POLR1C	99	66.189	Pteropus_vampyrus
ENSAOCG00000011687	polr1c	97	88.889	ENSPNYG00000003620	polr1c	100	88.889	Pundamilia_nyererei
ENSAOCG00000011687	polr1c	97	80.627	ENSPNAG00000008443	polr1c	100	80.057	Pygocentrus_nattereri
ENSAOCG00000011687	polr1c	96	71.920	ENSRNOG00000019079	Polr1c	99	71.347	Rattus_norvegicus
ENSAOCG00000011687	polr1c	98	70.986	ENSRBIG00000007155	POLR1C	100	71.225	Rhinopithecus_bieti
ENSAOCG00000011687	polr1c	98	70.986	ENSRROG00000000257	POLR1C	100	71.225	Rhinopithecus_roxellana
ENSAOCG00000011687	polr1c	50	32.804	YIL021W	RPB3	52	32.804	Saccharomyces_cerevisiae
ENSAOCG00000011687	polr1c	89	47.826	YPR110C	RPC40	95	47.826	Saccharomyces_cerevisiae
ENSAOCG00000011687	polr1c	99	70.112	ENSSBOG00000025735	POLR1C	99	70.968	Saimiri_boliviensis_boliviensis
ENSAOCG00000011687	polr1c	97	66.382	ENSSHAG00000014456	POLR1C	100	66.097	Sarcophilus_harrisii
ENSAOCG00000011687	polr1c	97	81.197	ENSSFOG00015019860	polr1c	100	80.627	Scleropages_formosus
ENSAOCG00000011687	polr1c	97	87.464	ENSSMAG00000018865	polr1c	100	86.325	Scophthalmus_maximus
ENSAOCG00000011687	polr1c	100	88.950	ENSSDUG00000015745	polr1c	94	88.950	Seriola_dumerili
ENSAOCG00000011687	polr1c	100	88.398	ENSSLDG00000018285	polr1c	94	88.398	Seriola_lalandi_dorsalis
ENSAOCG00000011687	polr1c	95	70.725	ENSSPUG00000011822	POLR1C	99	70.145	Sphenodon_punctatus
ENSAOCG00000011687	polr1c	97	94.017	ENSSPAG00000022369	polr1c	100	94.017	Stegastes_partitus
ENSAOCG00000011687	polr1c	98	70.704	ENSSSCG00000028007	POLR1C	99	70.423	Sus_scrofa
ENSAOCG00000011687	polr1c	93	70.833	ENSTGUG00000009159	POLR1C	99	70.536	Taeniopygia_guttata
ENSAOCG00000011687	polr1c	97	84.571	ENSTRUG00000006264	polr1c	99	84.571	Takifugu_rubripes
ENSAOCG00000011687	polr1c	74	70.037	ENSTTRG00000006344	POLR1C	76	69.663	Tursiops_truncatus
ENSAOCG00000011687	polr1c	96	71.920	ENSUAMG00000025602	POLR1C	99	71.633	Ursus_americanus
ENSAOCG00000011687	polr1c	96	71.920	ENSUMAG00000005938	POLR1C	99	71.633	Ursus_maritimus
ENSAOCG00000011687	polr1c	96	69.341	ENSVVUG00000028922	POLR1C	99	69.054	Vulpes_vulpes
ENSAOCG00000011687	polr1c	96	68.571	ENSXETG00000010882	polr1c	99	68.000	Xenopus_tropicalis
ENSAOCG00000011687	polr1c	97	85.470	ENSXCOG00000014185	polr1c	100	84.615	Xiphophorus_couchianus
ENSAOCG00000011687	polr1c	97	86.040	ENSXMAG00000015076	polr1c	100	86.040	Xiphophorus_maculatus