EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000011768 (Gene tree)
Gene ID: 111566556
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 6940 bases
Position: chrNXFZ01002006.1:215729-222668
Accession: 111566556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000007879	RNA_ligase	PF09414.10	5.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000002053	-	4615	XM_023267213	ENSAOCP00000007879	908 (aa)	XP_023122981	UPI000C3010EB

Gene Model

Click here to download ENSAOCG00000011768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000011768's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000011768	lig4	99	66.154	ENSG00000174405	LIG4	100	66.706	Homo_sapiens
ENSAOCG00000011768	lig4	100	97.687	ENSAPOG00000000866	lig4	100	97.687	Acanthochromis_polyacanthus
ENSAOCG00000011768	lig4	99	64.513	ENSAMEG00000019685	LIG4	99	64.184	Ailuropoda_melanoleuca
ENSAOCG00000011768	lig4	100	91.868	ENSACIG00000018309	lig4	99	91.969	Amphilophus_citrinellus
ENSAOCG00000011768	lig4	100	99.780	ENSAPEG00000017815	lig4	100	99.780	Amphiprion_percula
ENSAOCG00000011768	lig4	100	89.780	ENSATEG00000005583	lig4	100	89.780	Anabas_testudineus
ENSAOCG00000011768	lig4	96	67.084	ENSAPLG00000001673	LIG4	99	67.084	Anas_platyrhynchos
ENSAOCG00000011768	lig4	99	66.409	ENSACAG00000014566	LIG4	99	66.409	Anolis_carolinensis
ENSAOCG00000011768	lig4	99	66.154	ENSANAG00000012446	LIG4	99	65.934	Aotus_nancymaae
ENSAOCG00000011768	lig4	100	90.220	ENSACLG00000027051	lig4	99	90.319	Astatotilapia_calliptera
ENSAOCG00000011768	lig4	100	79.826	ENSAMXG00000008192	lig4	95	79.826	Astyanax_mexicanus
ENSAOCG00000011768	lig4	99	65.714	ENSBTAG00000015868	LIG4	99	65.495	Bos_taurus
ENSAOCG00000011768	lig4	99	65.862	ENSCJAG00000014689	LIG4	99	65.714	Callithrix_jacchus
ENSAOCG00000011768	lig4	99	65.308	ENSCAFG00000006031	LIG4	99	65.088	Canis_familiaris
ENSAOCG00000011768	lig4	99	65.308	ENSCAFG00020021230	LIG4	99	65.088	Canis_lupus_dingo
ENSAOCG00000011768	lig4	99	65.604	ENSCHIG00000001019	LIG4	99	65.385	Capra_hircus
ENSAOCG00000011768	lig4	99	65.006	ENSCAPG00000006284	LIG4	99	64.784	Cavia_aperea
ENSAOCG00000011768	lig4	99	64.835	ENSCPOG00000014266	LIG4	99	64.615	Cavia_porcellus
ENSAOCG00000011768	lig4	99	66.044	ENSCCAG00000019971	LIG4	99	65.897	Cebus_capucinus
ENSAOCG00000011768	lig4	99	65.495	ENSCATG00000021075	LIG4	99	65.275	Cercocebus_atys
ENSAOCG00000011768	lig4	99	65.487	ENSCLAG00000003376	LIG4	99	65.265	Chinchilla_lanigera
ENSAOCG00000011768	lig4	99	65.198	ENSCSAG00000000211	LIG4	99	64.978	Chlorocebus_sabaeus
ENSAOCG00000011768	lig4	99	68.590	ENSCPBG00000023291	LIG4	100	67.943	Chrysemys_picta_bellii
ENSAOCG00000011768	lig4	69	47.077	ENSCING00000009536	-	96	47.077	Ciona_intestinalis
ENSAOCG00000011768	lig4	83	44.605	ENSCSAVG00000010336	-	98	44.605	Ciona_savignyi
ENSAOCG00000011768	lig4	99	64.978	ENSCANG00000005805	LIG4	99	64.758	Colobus_angolensis_palliatus
ENSAOCG00000011768	lig4	99	64.435	ENSCGRG00001012072	Lig4	99	64.435	Cricetulus_griseus_chok1gshd
ENSAOCG00000011768	lig4	99	64.435	ENSCGRG00000013417	Lig4	99	64.435	Cricetulus_griseus_crigri
ENSAOCG00000011768	lig4	97	86.020	ENSCSEG00000013905	lig4	96	86.020	Cynoglossus_semilaevis
ENSAOCG00000011768	lig4	100	88.999	ENSCVAG00000007896	lig4	100	88.999	Cyprinodon_variegatus
ENSAOCG00000011768	lig4	100	80.748	ENSDARG00000060620	lig4	100	80.748	Danio_rerio
ENSAOCG00000011768	lig4	99	65.093	ENSDNOG00000000513	LIG4	99	64.764	Dasypus_novemcinctus
ENSAOCG00000011768	lig4	99	65.227	ENSDORG00000027303	Lig4	99	65.116	Dipodomys_ordii
ENSAOCG00000011768	lig4	92	30.804	FBgn0030506	Lig4	93	30.804	Drosophila_melanogaster
ENSAOCG00000011768	lig4	98	63.344	ENSETEG00000015563	LIG4	100	63.455	Echinops_telfairi
ENSAOCG00000011768	lig4	99	43.920	ENSEBUG00000014243	lig4	99	43.920	Eptatretus_burgeri
ENSAOCG00000011768	lig4	99	64.984	ENSEASG00005022073	LIG4	99	64.874	Equus_asinus_asinus
ENSAOCG00000011768	lig4	99	64.874	ENSECAG00000003257	LIG4	99	64.764	Equus_caballus
ENSAOCG00000011768	lig4	98	84.093	ENSELUG00000006787	lig4	99	84.205	Esox_lucius
ENSAOCG00000011768	lig4	99	64.452	ENSFCAG00000031985	LIG4	99	64.120	Felis_catus
ENSAOCG00000011768	lig4	88	69.107	ENSFALG00000004214	LIG4	98	69.107	Ficedula_albicollis
ENSAOCG00000011768	lig4	99	64.505	ENSFDAG00000008973	LIG4	99	64.286	Fukomys_damarensis
ENSAOCG00000011768	lig4	100	87.925	ENSFHEG00000007398	lig4	91	87.925	Fundulus_heteroclitus
ENSAOCG00000011768	lig4	86	78.361	ENSGMOG00000012843	lig4	99	78.361	Gadus_morhua
ENSAOCG00000011768	lig4	99	66.593	ENSGALG00000016854	LIG4	99	66.593	Gallus_gallus
ENSAOCG00000011768	lig4	99	87.076	ENSGAFG00000019779	lig4	96	87.514	Gambusia_affinis
ENSAOCG00000011768	lig4	99	86.093	ENSGACG00000014135	lig4	99	86.424	Gasterosteus_aculeatus
ENSAOCG00000011768	lig4	99	65.934	ENSGGOG00000027771	LIG4	99	65.714	Gorilla_gorilla
ENSAOCG00000011768	lig4	100	90.000	ENSHBUG00000006245	lig4	99	90.099	Haplochromis_burtoni
ENSAOCG00000011768	lig4	99	64.725	ENSHGLG00000000718	LIG4	99	64.505	Heterocephalus_glaber_female
ENSAOCG00000011768	lig4	99	64.725	ENSHGLG00100003265	LIG4	99	64.505	Heterocephalus_glaber_male
ENSAOCG00000011768	lig4	100	83.772	ENSHCOG00000012010	lig4	100	83.772	Hippocampus_comes
ENSAOCG00000011768	lig4	100	79.208	ENSIPUG00000013748	lig4	100	79.208	Ictalurus_punctatus
ENSAOCG00000011768	lig4	99	65.385	ENSSTOG00000024303	LIG4	99	65.165	Ictidomys_tridecemlineatus
ENSAOCG00000011768	lig4	99	65.275	ENSJJAG00000006750	Lig4	99	64.945	Jaculus_jaculus
ENSAOCG00000011768	lig4	100	85.809	ENSKMAG00000001149	lig4	100	85.809	Kryptolebias_marmoratus
ENSAOCG00000011768	lig4	91	90.810	ENSLBEG00000014578	lig4	100	90.810	Labrus_bergylta
ENSAOCG00000011768	lig4	100	67.873	ENSLACG00000003282	LIG4	100	67.873	Latimeria_chalumnae
ENSAOCG00000011768	lig4	100	73.604	ENSLOCG00000008901	lig4	99	73.604	Lepisosteus_oculatus
ENSAOCG00000011768	lig4	99	63.846	ENSLAFG00000031152	LIG4	99	63.736	Loxodonta_africana
ENSAOCG00000011768	lig4	99	65.308	ENSMFAG00000037235	LIG4	99	65.088	Macaca_fascicularis
ENSAOCG00000011768	lig4	99	65.198	ENSMMUG00000008874	LIG4	99	64.978	Macaca_mulatta
ENSAOCG00000011768	lig4	99	65.308	ENSMNEG00000023575	LIG4	99	65.088	Macaca_nemestrina
ENSAOCG00000011768	lig4	99	65.088	ENSMLEG00000026720	LIG4	99	64.868	Mandrillus_leucophaeus
ENSAOCG00000011768	lig4	100	90.330	ENSMAMG00000008472	lig4	99	90.330	Mastacembelus_armatus
ENSAOCG00000011768	lig4	99	90.209	ENSMZEG00005001855	lig4	99	90.209	Maylandia_zebra
ENSAOCG00000011768	lig4	100	66.118	ENSMGAG00000015532	LIG4	100	66.118	Meleagris_gallopavo
ENSAOCG00000011768	lig4	99	63.956	ENSMOCG00000019000	Lig4	99	63.956	Microtus_ochrogaster
ENSAOCG00000011768	lig4	100	88.571	ENSMMOG00000004390	lig4	100	88.571	Mola_mola
ENSAOCG00000011768	lig4	99	65.789	ENSMODG00000025064	LIG4	99	65.899	Monodelphis_domestica
ENSAOCG00000011768	lig4	100	89.121	ENSMALG00000008555	lig4	100	89.121	Monopterus_albus
ENSAOCG00000011768	lig4	99	64.725	MGP_CAROLIEiJ_G0030809	Lig4	99	64.615	Mus_caroli
ENSAOCG00000011768	lig4	99	64.615	ENSMUSG00000049717	Lig4	99	64.505	Mus_musculus
ENSAOCG00000011768	lig4	99	64.615	MGP_PahariEiJ_G0021270	Lig4	99	64.615	Mus_pahari
ENSAOCG00000011768	lig4	99	64.835	MGP_SPRETEiJ_G0031917	Lig4	99	64.725	Mus_spretus
ENSAOCG00000011768	lig4	99	64.537	ENSMPUG00000018675	LIG4	99	64.207	Mustela_putorius_furo
ENSAOCG00000011768	lig4	99	65.752	ENSMLUG00000001267	LIG4	99	65.532	Myotis_lucifugus
ENSAOCG00000011768	lig4	99	65.338	ENSNGAG00000013258	Lig4	99	65.227	Nannospalax_galili
ENSAOCG00000011768	lig4	100	90.220	ENSNBRG00000021252	lig4	99	90.319	Neolamprologus_brichardi
ENSAOCG00000011768	lig4	99	65.275	ENSNLEG00000007888	LIG4	99	65.055	Nomascus_leucogenys
ENSAOCG00000011768	lig4	99	64.381	ENSOPRG00000005765	LIG4	99	64.270	Ochotona_princeps
ENSAOCG00000011768	lig4	99	64.823	ENSODEG00000019683	LIG4	99	64.602	Octodon_degus
ENSAOCG00000011768	lig4	99	90.979	ENSONIG00000011969	lig4	99	90.979	Oreochromis_niloticus
ENSAOCG00000011768	lig4	99	65.487	ENSOCUG00000015734	LIG4	99	65.376	Oryctolagus_cuniculus
ENSAOCG00000011768	lig4	99	85.495	ENSORLG00000004041	lig4	99	85.495	Oryzias_latipes
ENSAOCG00000011768	lig4	99	85.495	ENSORLG00020019607	lig4	99	85.495	Oryzias_latipes_hni
ENSAOCG00000011768	lig4	99	85.824	ENSORLG00015017754	lig4	99	85.824	Oryzias_latipes_hsok
ENSAOCG00000011768	lig4	76	90.539	ENSOMEG00000003459	lig4	99	90.539	Oryzias_melastigma
ENSAOCG00000011768	lig4	99	65.646	ENSOGAG00000032120	LIG4	99	65.536	Otolemur_garnettii
ENSAOCG00000011768	lig4	82	69.489	ENSOARG00000005590	LIG4	98	69.489	Ovis_aries
ENSAOCG00000011768	lig4	99	65.934	ENSPPAG00000032998	LIG4	99	65.714	Pan_paniscus
ENSAOCG00000011768	lig4	99	65.006	ENSPPRG00000017804	LIG4	99	64.673	Panthera_pardus
ENSAOCG00000011768	lig4	99	64.895	ENSPTIG00000010051	LIG4	99	64.563	Panthera_tigris_altaica
ENSAOCG00000011768	lig4	99	66.044	ENSPTRG00000006025	LIG4	99	65.824	Pan_troglodytes
ENSAOCG00000011768	lig4	99	65.604	ENSPANG00000007562	LIG4	99	65.385	Papio_anubis
ENSAOCG00000011768	lig4	100	78.438	ENSPKIG00000011645	lig4	99	78.438	Paramormyrops_kingsleyae
ENSAOCG00000011768	lig4	100	67.873	ENSPSIG00000001504	LIG4	99	67.991	Pelodiscus_sinensis
ENSAOCG00000011768	lig4	98	80.942	ENSPMGG00000013486	lig4	100	80.285	Periophthalmus_magnuspinnatus
ENSAOCG00000011768	lig4	99	64.026	ENSPEMG00000000076	Lig4	99	63.916	Peromyscus_maniculatus_bairdii
ENSAOCG00000011768	lig4	99	65.487	ENSPCIG00000021882	LIG4	99	65.376	Phascolarctos_cinereus
ENSAOCG00000011768	lig4	100	88.377	ENSPFOG00000000797	lig4	100	88.816	Poecilia_formosa
ENSAOCG00000011768	lig4	100	88.268	ENSPLAG00000001196	lig4	100	88.706	Poecilia_latipinna
ENSAOCG00000011768	lig4	100	88.487	ENSPMEG00000021353	lig4	100	88.925	Poecilia_mexicana
ENSAOCG00000011768	lig4	100	87.500	ENSPREG00000007323	lig4	100	88.048	Poecilia_reticulata
ENSAOCG00000011768	lig4	99	65.275	ENSPPYG00000005540	LIG4	99	65.055	Pongo_abelii
ENSAOCG00000011768	lig4	99	64.686	ENSPVAG00000016403	LIG4	99	64.466	Pteropus_vampyrus
ENSAOCG00000011768	lig4	100	90.220	ENSPNYG00000009660	lig4	99	90.319	Pundamilia_nyererei
ENSAOCG00000011768	lig4	99	82.478	ENSPNAG00000028056	lig4	99	82.478	Pygocentrus_nattereri
ENSAOCG00000011768	lig4	99	82.478	ENSPNAG00000028069	LIG4	99	82.478	Pygocentrus_nattereri
ENSAOCG00000011768	lig4	99	64.784	ENSRNOG00000014605	Lig4	99	64.505	Rattus_norvegicus
ENSAOCG00000011768	lig4	99	64.648	ENSRBIG00000039962	LIG4	99	64.427	Rhinopithecus_bieti
ENSAOCG00000011768	lig4	99	65.198	ENSRROG00000006040	LIG4	99	64.978	Rhinopithecus_roxellana
ENSAOCG00000011768	lig4	99	65.752	ENSSBOG00000019029	LIG4	99	65.532	Saimiri_boliviensis_boliviensis
ENSAOCG00000011768	lig4	99	63.164	ENSSHAG00000009525	LIG4	99	63.274	Sarcophilus_harrisii
ENSAOCG00000011768	lig4	100	79.868	ENSSFOG00015012835	lig4	100	79.868	Scleropages_formosus
ENSAOCG00000011768	lig4	100	84.912	ENSSMAG00000011267	lig4	100	84.912	Scophthalmus_maximus
ENSAOCG00000011768	lig4	100	89.278	ENSSDUG00000010343	lig4	100	89.497	Seriola_dumerili
ENSAOCG00000011768	lig4	100	88.184	ENSSLDG00000003239	lig4	100	88.184	Seriola_lalandi_dorsalis
ENSAOCG00000011768	lig4	99	64.184	ENSSARG00000006573	LIG4	99	63.965	Sorex_araneus
ENSAOCG00000011768	lig4	92	69.048	ENSSPUG00000002444	LIG4	100	68.929	Sphenodon_punctatus
ENSAOCG00000011768	lig4	100	93.626	ENSSPAG00000001609	lig4	100	93.626	Stegastes_partitus
ENSAOCG00000011768	lig4	99	65.237	ENSSSCG00000009540	LIG4	99	64.906	Sus_scrofa
ENSAOCG00000011768	lig4	99	66.446	ENSTGUG00000010795	LIG4	100	66.446	Taeniopygia_guttata
ENSAOCG00000011768	lig4	100	87.033	ENSTRUG00000009984	lig4	100	87.033	Takifugu_rubripes
ENSAOCG00000011768	lig4	100	84.581	ENSTNIG00000010348	lig4	100	84.802	Tetraodon_nigroviridis
ENSAOCG00000011768	lig4	99	65.642	ENSTBEG00000017741	LIG4	99	65.642	Tupaia_belangeri
ENSAOCG00000011768	lig4	99	65.165	ENSTTRG00000012660	LIG4	99	64.945	Tursiops_truncatus
ENSAOCG00000011768	lig4	99	64.466	ENSUAMG00000003773	LIG4	99	64.136	Ursus_americanus
ENSAOCG00000011768	lig4	100	67.544	ENSXETG00000002654	lig4	100	67.544	Xenopus_tropicalis
ENSAOCG00000011768	lig4	100	87.939	ENSXCOG00000017401	lig4	100	88.377	Xiphophorus_couchianus
ENSAOCG00000011768	lig4	100	88.268	ENSXMAG00000015142	lig4	99	88.706	Xiphophorus_maculatus