EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAOCG00000011891 (Gene tree)
Gene ID: 111583324
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Plus strand
Length: 11924 bases
Position: chrNXFZ01001808.1:39753-51676
Accession: 111583324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000007984	RRM_1	PF00076.22	2e-30	1	2
ENSAOCP00000007984	RRM_1	PF00076.22	2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000001888	-	2527	XM_023292355	ENSAOCP00000007984	340 (aa)	XP_023148123	UPI000C303074

Gene Model

Click here to download ENSAOCG00000011891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000011891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAOCG00000011891	trnau1apb	50	32.847	ENSAOCG00000011133	-	68	31.034
ENSAOCG00000011891	trnau1apb	98	42.815	ENSAOCG00000008056	trnau1apa	98	42.939
ENSAOCG00000011891	trnau1apb	50	30.460	ENSAOCG00000004685	tial1	82	30.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000011891	trnau1apb	100	81.176	ENSAPOG00000010086	trnau1apb	100	82.941	Acanthochromis_polyacanthus
ENSAOCG00000011891	trnau1apb	100	85.294	ENSACIG00000001863	trnau1apb	100	84.118	Amphilophus_citrinellus
ENSAOCG00000011891	trnau1apb	100	98.235	ENSAPEG00000008029	trnau1apb	100	98.235	Amphiprion_percula
ENSAOCG00000011891	trnau1apb	100	93.235	ENSATEG00000002196	trnau1apb	100	93.235	Anabas_testudineus
ENSAOCG00000011891	trnau1apb	100	85.423	ENSACLG00000003016	trnau1apb	100	84.257	Astatotilapia_calliptera
ENSAOCG00000011891	trnau1apb	99	64.897	ENSAMXG00000001805	trnau1apb	99	66.568	Astyanax_mexicanus
ENSAOCG00000011891	trnau1apb	99	85.882	ENSCSEG00000018215	trnau1apb	100	85.673	Cynoglossus_semilaevis
ENSAOCG00000011891	trnau1apb	95	81.212	ENSCVAG00000017866	trnau1apb	100	82.424	Cyprinodon_variegatus
ENSAOCG00000011891	trnau1apb	100	63.743	ENSDARG00000056475	trnau1apb	98	66.272	Danio_rerio
ENSAOCG00000011891	trnau1apb	100	64.035	ENSELUG00000016683	trnau1apb	99	66.082	Esox_lucius
ENSAOCG00000011891	trnau1apb	100	84.971	ENSFHEG00000001267	trnau1apb	100	84.545	Fundulus_heteroclitus
ENSAOCG00000011891	trnau1apb	100	71.469	ENSGMOG00000001160	trnau1apb	100	75.660	Gadus_morhua
ENSAOCG00000011891	trnau1apb	52	94.915	ENSGAFG00000006770	trnau1apb	100	75.731	Gambusia_affinis
ENSAOCG00000011891	trnau1apb	100	81.765	ENSGACG00000014944	trnau1apb	100	82.991	Gasterosteus_aculeatus
ENSAOCG00000011891	trnau1apb	71	40.161	ENSGAGG00000022384	-	78	39.592	Gopherus_agassizii
ENSAOCG00000011891	trnau1apb	100	93.235	ENSHBUG00000018944	trnau1apb	99	92.353	Haplochromis_burtoni
ENSAOCG00000011891	trnau1apb	68	83.117	ENSHCOG00000011350	trnau1apb	79	80.645	Hippocampus_comes
ENSAOCG00000011891	trnau1apb	99	64.223	ENSIPUG00000008843	tsp1l	99	66.667	Ictalurus_punctatus
ENSAOCG00000011891	trnau1apb	64	91.781	ENSKMAG00000010082	trnau1apb	99	87.755	Kryptolebias_marmoratus
ENSAOCG00000011891	trnau1apb	100	89.118	ENSLBEG00000020480	trnau1apb	100	89.118	Labrus_bergylta
ENSAOCG00000011891	trnau1apb	100	53.623	ENSLOCG00000013175	trnau1apb	99	54.227	Lepisosteus_oculatus
ENSAOCG00000011891	trnau1apb	100	92.353	ENSMAMG00000012192	trnau1apb	100	92.647	Mastacembelus_armatus
ENSAOCG00000011891	trnau1apb	100	93.235	ENSMZEG00005014852	trnau1apb	99	92.353	Maylandia_zebra
ENSAOCG00000011891	trnau1apb	71	38.115	ENSMGAG00000003234	-	99	37.705	Meleagris_gallopavo
ENSAOCG00000011891	trnau1apb	97	78.261	ENSMMOG00000021521	trnau1apb	100	77.681	Mola_mola
ENSAOCG00000011891	trnau1apb	100	76.176	ENSMALG00000003772	trnau1apb	100	75.882	Monopterus_albus
ENSAOCG00000011891	trnau1apb	97	85.586	ENSNBRG00000000751	trnau1apb	99	84.384	Neolamprologus_brichardi
ENSAOCG00000011891	trnau1apb	99	81.306	ENSONIG00000016639	trnau1apb	100	78.994	Oreochromis_niloticus
ENSAOCG00000011891	trnau1apb	66	91.071	ENSORLG00000013265	trnau1apb	99	85.756	Oryzias_latipes
ENSAOCG00000011891	trnau1apb	100	86.550	ENSORLG00020004464	trnau1apb	100	85.890	Oryzias_latipes_hni
ENSAOCG00000011891	trnau1apb	100	86.550	ENSORLG00015021098	trnau1apb	99	86.550	Oryzias_latipes_hsok
ENSAOCG00000011891	trnau1apb	100	76.453	ENSOMEG00000016531	trnau1apb	99	87.500	Oryzias_melastigma
ENSAOCG00000011891	trnau1apb	100	58.772	ENSPKIG00000007995	trnau1apb	99	61.318	Paramormyrops_kingsleyae
ENSAOCG00000011891	trnau1apb	71	41.897	ENSPSIG00000004189	-	78	41.767	Pelodiscus_sinensis
ENSAOCG00000011891	trnau1apb	79	78.333	ENSPMGG00000018509	trnau1apb	97	79.167	Periophthalmus_magnuspinnatus
ENSAOCG00000011891	trnau1apb	100	82.471	ENSPFOG00000003938	trnau1apb	99	84.104	Poecilia_formosa
ENSAOCG00000011891	trnau1apb	100	82.471	ENSPLAG00000015480	trnau1apb	99	84.104	Poecilia_latipinna
ENSAOCG00000011891	trnau1apb	100	82.471	ENSPMEG00000012743	trnau1apb	99	84.104	Poecilia_mexicana
ENSAOCG00000011891	trnau1apb	100	81.034	ENSPREG00000015035	trnau1apb	99	82.659	Poecilia_reticulata
ENSAOCG00000011891	trnau1apb	100	82.799	ENSPNYG00000012127	trnau1apb	100	81.633	Pundamilia_nyererei
ENSAOCG00000011891	trnau1apb	99	65.982	ENSPNAG00000019138	trnau1apb	98	67.552	Pygocentrus_nattereri
ENSAOCG00000011891	trnau1apb	99	60.405	ENSSFOG00015014158	trnau1apb	99	63.768	Scleropages_formosus
ENSAOCG00000011891	trnau1apb	99	89.086	ENSSMAG00000001745	trnau1apb	99	88.791	Scophthalmus_maximus
ENSAOCG00000011891	trnau1apb	99	93.805	ENSSDUG00000011109	trnau1apb	99	93.805	Seriola_dumerili
ENSAOCG00000011891	trnau1apb	99	93.510	ENSSLDG00000012947	trnau1apb	99	93.510	Seriola_lalandi_dorsalis
ENSAOCG00000011891	trnau1apb	71	34.884	ENSSPUG00000016701	-	82	36.400	Sphenodon_punctatus
ENSAOCG00000011891	trnau1apb	100	97.353	ENSSPAG00000006917	trnau1apb	100	97.353	Stegastes_partitus
ENSAOCG00000011891	trnau1apb	100	80.409	ENSTRUG00000008608	trnau1apb	99	81.050	Takifugu_rubripes
ENSAOCG00000011891	trnau1apb	99	69.436	ENSTNIG00000000916	trnau1apb	100	67.953	Tetraodon_nigroviridis
ENSAOCG00000011891	trnau1apb	94	74.164	ENSXCOG00000007974	trnau1apb	94	75.841	Xiphophorus_couchianus
ENSAOCG00000011891	trnau1apb	100	82.759	ENSXMAG00000029918	trnau1apb	99	84.393	Xiphophorus_maculatus