EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAOCG00000012258 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-256m1.8
Alias: -
Full Name: uncharacterized LOC111579411
Gene Type: protein_coding
Species: Amphiprion_ocellaris
Status: putative
Strand: Minus strand
Length: 5888 bases
Position: chrNXFZ01003453.1:1168137-1174024
Accession: 111579411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAOCP00000008282	tRNA-synt_2	PF00152.20	1.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAOCT00000001353	-	4752	XM_023286693	ENSAOCP00000008282	1583 (aa)	XP_023142461	-

Gene Model

Click here to download ENSAOCG00000012258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAOCG00000012258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAOCG00000012258	si:ch211-256m1.8	100	95.578	ENSAPOG00000007012	si:ch211-256m1.8	100	95.578	Acanthochromis_polyacanthus
ENSAOCG00000012258	si:ch211-256m1.8	100	99.495	ENSAPEG00000002724	si:ch211-256m1.8	100	99.495	Amphiprion_percula
ENSAOCG00000012258	si:ch211-256m1.8	100	80.796	ENSATEG00000006278	si:ch211-256m1.8	100	80.796	Anabas_testudineus
ENSAOCG00000012258	si:ch211-256m1.8	100	81.112	ENSACLG00000011503	si:ch211-256m1.8	100	81.112	Astatotilapia_calliptera
ENSAOCG00000012258	si:ch211-256m1.8	100	67.314	ENSAMXG00000038245	si:ch211-256m1.8	100	67.314	Astyanax_mexicanus
ENSAOCG00000012258	si:ch211-256m1.8	100	74.668	ENSCSEG00000006255	si:ch211-256m1.8	100	74.668	Cynoglossus_semilaevis
ENSAOCG00000012258	si:ch211-256m1.8	100	76.500	ENSCVAG00000003376	si:ch211-256m1.8	100	76.500	Cyprinodon_variegatus
ENSAOCG00000012258	si:ch211-256m1.8	100	65.069	ENSDARG00000055172	si:ch211-256m1.8	100	65.195	Danio_rerio
ENSAOCG00000012258	si:ch211-256m1.8	100	69.019	ENSELUG00000010546	si:ch211-256m1.8	100	69.019	Esox_lucius
ENSAOCG00000012258	si:ch211-256m1.8	100	74.858	ENSFHEG00000005847	si:ch211-256m1.8	100	74.858	Fundulus_heteroclitus
ENSAOCG00000012258	si:ch211-256m1.8	100	77.385	ENSGAFG00000010269	si:ch211-256m1.8	100	77.385	Gambusia_affinis
ENSAOCG00000012258	si:ch211-256m1.8	100	81.175	ENSHBUG00000014407	si:ch211-256m1.8	100	81.175	Haplochromis_burtoni
ENSAOCG00000012258	si:ch211-256m1.8	100	73.152	ENSHCOG00000006884	si:ch211-256m1.8	100	74.189	Hippocampus_comes
ENSAOCG00000012258	si:ch211-256m1.8	100	64.806	ENSIPUG00000022659	si:ch211-256m1.8	100	64.806	Ictalurus_punctatus
ENSAOCG00000012258	si:ch211-256m1.8	100	78.711	ENSKMAG00000016377	si:ch211-256m1.8	100	78.711	Kryptolebias_marmoratus
ENSAOCG00000012258	si:ch211-256m1.8	100	80.354	ENSLBEG00000010639	si:ch211-256m1.8	100	80.354	Labrus_bergylta
ENSAOCG00000012258	si:ch211-256m1.8	100	59.588	ENSLOCG00000011127	si:ch211-256m1.8	100	59.400	Lepisosteus_oculatus
ENSAOCG00000012258	si:ch211-256m1.8	99	80.063	ENSMAMG00000005651	si:ch211-256m1.8	99	80.063	Mastacembelus_armatus
ENSAOCG00000012258	si:ch211-256m1.8	100	81.175	ENSMZEG00005006924	si:ch211-256m1.8	100	81.175	Maylandia_zebra
ENSAOCG00000012258	si:ch211-256m1.8	100	74.779	ENSMMOG00000001736	si:ch211-256m1.8	100	74.779	Mola_mola
ENSAOCG00000012258	si:ch211-256m1.8	100	80.985	ENSNBRG00000005143	si:ch211-256m1.8	100	80.985	Neolamprologus_brichardi
ENSAOCG00000012258	si:ch211-256m1.8	100	75.631	ENSORLG00000022248	si:ch211-256m1.8	100	75.631	Oryzias_latipes
ENSAOCG00000012258	si:ch211-256m1.8	100	75.442	ENSORLG00020000214	si:ch211-256m1.8	100	75.442	Oryzias_latipes_hni
ENSAOCG00000012258	si:ch211-256m1.8	100	75.490	ENSORLG00015020297	si:ch211-256m1.8	100	75.490	Oryzias_latipes_hsok
ENSAOCG00000012258	si:ch211-256m1.8	100	75.490	ENSOMEG00000004519	si:ch211-256m1.8	100	75.490	Oryzias_melastigma
ENSAOCG00000012258	si:ch211-256m1.8	96	66.158	ENSPKIG00000007399	si:ch211-256m1.8	100	66.158	Paramormyrops_kingsleyae
ENSAOCG00000012258	si:ch211-256m1.8	100	66.310	ENSPMGG00000007698	si:ch211-256m1.8	100	66.310	Periophthalmus_magnuspinnatus
ENSAOCG00000012258	si:ch211-256m1.8	100	77.258	ENSPFOG00000005178	si:ch211-256m1.8	100	77.258	Poecilia_formosa
ENSAOCG00000012258	si:ch211-256m1.8	100	77.006	ENSPLAG00000006872	si:ch211-256m1.8	100	77.006	Poecilia_latipinna
ENSAOCG00000012258	si:ch211-256m1.8	100	77.006	ENSPMEG00000021815	si:ch211-256m1.8	100	77.006	Poecilia_mexicana
ENSAOCG00000012258	si:ch211-256m1.8	100	76.943	ENSPREG00000018669	si:ch211-256m1.8	100	76.943	Poecilia_reticulata
ENSAOCG00000012258	si:ch211-256m1.8	100	81.049	ENSPNYG00000018038	si:ch211-256m1.8	100	81.049	Pundamilia_nyererei
ENSAOCG00000012258	si:ch211-256m1.8	99	65.163	ENSPNAG00000018965	-	99	65.163	Pygocentrus_nattereri
ENSAOCG00000012258	si:ch211-256m1.8	99	66.291	ENSPNAG00000003552	si:ch211-256m1.8	99	66.291	Pygocentrus_nattereri
ENSAOCG00000012258	si:ch211-256m1.8	100	65.050	ENSSFOG00015008344	si:ch211-256m1.8	100	65.050	Scleropages_formosus
ENSAOCG00000012258	si:ch211-256m1.8	100	81.049	ENSSMAG00000007562	si:ch211-256m1.8	100	81.049	Scophthalmus_maximus
ENSAOCG00000012258	si:ch211-256m1.8	100	83.512	ENSSDUG00000018180	si:ch211-256m1.8	100	83.512	Seriola_dumerili
ENSAOCG00000012258	si:ch211-256m1.8	100	83.449	ENSSLDG00000020310	si:ch211-256m1.8	100	83.449	Seriola_lalandi_dorsalis
ENSAOCG00000012258	si:ch211-256m1.8	100	90.903	ENSSPAG00000013419	si:ch211-256m1.8	100	90.903	Stegastes_partitus
ENSAOCG00000012258	si:ch211-256m1.8	100	69.798	ENSTRUG00000023803	si:ch211-256m1.8	100	69.798	Takifugu_rubripes
ENSAOCG00000012258	si:ch211-256m1.8	100	77.827	ENSXCOG00000017726	si:ch211-256m1.8	100	77.827	Xiphophorus_couchianus
ENSAOCG00000012258	si:ch211-256m1.8	100	77.827	ENSXMAG00000026576	si:ch211-256m1.8	100	77.827	Xiphophorus_maculatus